{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,21]],"date-time":"2026-09-21T06:01:55Z","timestamp":1789970515800,"version":"4.0.1"},"reference-count":87,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2026,9,21]],"date-time":"2026-09-21T00:00:00Z","timestamp":1789948800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Plant Sci."],"abstract":"<jats:sec>\n                    <jats:title>Introduction<\/jats:title>\n                    <jats:p>Sheath blight ranks among rice's most damaging diseases, cutting yield by up to half in severe outbreaks. No source of complete, durable resistance exists, so identifying the genetic basis of partial or quantitative resistance is a priority for breeding.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>We performed GWAS on 130 genotypes from the Bengal-Assam-Aus Panel (BAAP), phenotyped over three seasons viz., Wet 2018, Wet 2019, and Dry 2018-19, scoring disease severity by per cent disease index (PDI) and area under the disease progress curve (AUDPC).<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>\n                      Trait distributions were near-normal with substantial variation across genotypes, pointing to polygenic control of resistance. A strong genotype-by-environment interaction meant combined analysis wasn't appropriate, so we ran GWAS separately per season. This turned up 27 associated loci, three of which on chromosomes 1, 9, and 10 were consistent and high-confidence. The candidate genes underlying these peaks were\n                      <jats:italic>LOC_Os01g03360<\/jats:italic>\n                      (BBTI4, a Bowman-Birk protease inhibitor),\n                      <jats:italic>LOC_Os09g11790<\/jats:italic>\n                      (DEFL14, a defensin-like peptide), and\n                      <jats:italic>LOC_Os10g04860<\/jats:italic>\n                      (AO2, an aldehyde oxidase).\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Discussion<\/jats:title>\n                    <jats:p>The predicted functions include protease inhibition, antifungal activity, and hormone regulation. Instead of relying on a single-gene mechanism, it's advisable to suggest a layered defense response. Collectively, these findings enhance our understanding of the genetic and biochemical aspects of sheath blight tolerance, providing breeders with specific targets to focus on in their efforts.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.3389\/fpls.2026.1890133","type":"journal-article","created":{"date-parts":[[2026,9,21]],"date-time":"2026-09-21T05:35:40Z","timestamp":1789968940000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":0,"title":["Genomic insights into sheath blight resistance: leveraging natural variation in the Bengal-Assam-Aus rice panel for multi-season association mapping"],"prefix":"10.3389","volume":"17","author":[{"given":"R.","family":"Naveenkumar","sequence":"first","affiliation":[{"name":"Crop Improvement Division, Indian Council of Agricultural Research (ICAR)-Central Rice Research Institute (CRRI)","place":["Cuttack, India"]},{"name":"Department of Plant Pathology, Amrita School of Agricultural Sciences, Amrita Vishwa Vidyapeetham","place":["Coimbatore, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Siddharth","family":"Panda","sequence":"additional","affiliation":[{"name":"Crop Improvement Division, Indian Council of Agricultural Research (ICAR)-Central Rice Research Institute (CRRI)","place":["Cuttack, India"]},{"name":"Department of Genetics and Plant Breeding, Institute of Agricultural Sciences (IAS), Siksha O Anusandhan Deemed to be University (DU)","place":["Bhubaneswar, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Challa Vijay Kumar","family":"Reddy","sequence":"additional","affiliation":[{"name":"Department of Genetics and Plant Breeding, College of Agriculture, Odisha University of Agriculture and Technology (OUAT)","place":["Bhubaneswar, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S. R.","family":"Prabhukarthikeyan","sequence":"additional","affiliation":[{"name":"Crop Protection Division, Indian Council of Agricultural Research (ICAR)-Central Rice Research Institute (CRRI)","place":["Cuttack, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"G.","family":"Sangeetha","sequence":"additional","affiliation":[{"name":"Crop Protection Division, ICAR-Indian Institute of Horticulture Research","place":["Bengaluru, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Annamalai","family":"Anandan","sequence":"additional","affiliation":[{"name":"Crop Improvement Division, Indian Council of Agricultural Research (ICAR)-Central Rice Research Institute (CRRI)","place":["Cuttack, India"]},{"name":"CAR-National Institute of Seed Science & Technology, Regional Station","place":["Bengaluru, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Licon","family":"Kumar Acharya","sequence":"additional","affiliation":[{"name":"ICAR- National Research Institute for Integrated Pest Management","place":["New Delhi, India"]},{"name":"Division of Plant Pathology, Indian Council of Agricultural Research (ICAR) - Indian Agricultural Research Institute","place":["New Delhi, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jauhar","family":"Ali","sequence":"additional","affiliation":[{"name":"Rice Breeding Innovation Department, International Rice Research Institute (IRRI)","place":["Los Ba\u00f1os, Laguna, Philippines"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2026,9,21]]},"reference":[{"key":"B1","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2022.911775","article-title":"Superior haplotypes for early root vigor traits in rice under dry direct seeded low nitrogen condition through genome wide association mapping","volume":"13","author":"Anandan","year":"2022","journal-title":"Front. 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