{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,10]],"date-time":"2026-09-10T06:06:58Z","timestamp":1789020418393,"version":"build-2803163510"},"reference-count":94,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2026,9,10]],"date-time":"2026-09-10T00:00:00Z","timestamp":1788998400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Plant Sci."],"abstract":"<jats:p>\n                    Fructose-1,6-bisphosphate aldolases (FBAs; EC 4.1.2.13) are core enzymes involved in glycolysis, gluconeogenesis, and the Calvin cycle, exerting vital functions in carbon allocation, plant growth and development, as well as the adaptation to abiotic stresses. Although the\n                    <jats:italic>FBA<\/jats:italic>\n                    gene family has been systematically characterized in a variety of plant species, a comprehensive characterization of FBAs in soybean (\n                    <jats:italic>Glycine max<\/jats:italic>\n                    ) remains unreported to date, restricting the elucidation of the conserved and legume-specific functions of\n                    <jats:italic>GmFBA<\/jats:italic>\n                    genes in stress adaptation. In the present study, a total of 13\n                    <jats:italic>FBA<\/jats:italic>\n                    genes, designated as\n                    <jats:italic>GmFBA1<\/jats:italic>\n                    to\n                    <jats:italic>GmFBA13<\/jats:italic>\n                    , were identified in the soybean genome, which were unevenly distributed across 9 out of the 20 soybean chromosomes. Subcellular localization prediction showed that six GmFBA proteins were localized in the chloroplast, while the remaining seven were distributed in the cytoplasm. Phylogenetic analysis classified these genes into four distinct classes, and members within the same class shared similar gene structural features. Synteny analysis demonstrated that segmental duplication events served as a major driving force for the expansion of the\n                    <jats:italic>GmFBA<\/jats:italic>\n                    gene family. Promoter sequence analysis revealed that the upstream regulatory regions of\n                    <jats:italic>GmFBA<\/jats:italic>\n                    genes contained a variety of\n                    <jats:italic>cis<\/jats:italic>\n                    -acting elements associated with hormone responses and stress tolerance, suggesting that the expression of\n                    <jats:italic>GmFBA<\/jats:italic>\n                    genes might be modulated by diverse developmental cues and environmental stresses. Expression profiling indicated that\n                    <jats:italic>GmFBA<\/jats:italic>\n                    genes displayed differential expression patterns in various organs and tissues of soybean, and a number of\n                    <jats:italic>GmFBA<\/jats:italic>\n                    genes showed significant expression changes under biotic and abiotic stress conditions. Transcriptome analysis revealed distinct expression patterns of\n                    <jats:italic>GmFBA<\/jats:italic>\n                    genes in response to salt-alkali stress. Furthermore, quantitative real-time PCR assays indicated a significant upregulation of two specific\n                    <jats:italic>GmFBA<\/jats:italic>\n                    genes,\n                    <jats:italic>GmFBA2<\/jats:italic>\n                    and\n                    <jats:italic>GmFBA11<\/jats:italic>\n                    . These findings suggest that\n                    <jats:italic>GmFBA2<\/jats:italic>\n                    and\n                    <jats:italic>GmFBA11<\/jats:italic>\n                    may serve as candidate genes potentially involved in the adaptive response to salt-alkali stress. Collectively, this study presents the first comprehensive characterization of the\n                    <jats:italic>FBA<\/jats:italic>\n                    gene family in soybean, puts forward putative candidate genes for salt-alkali tolerance breeding, and lays a foundation for subsequent functional investigations.\n                  <\/jats:p>","DOI":"10.3389\/fpls.2026.1908014","type":"journal-article","created":{"date-parts":[[2026,9,10]],"date-time":"2026-09-10T05:32:57Z","timestamp":1789018377000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":0,"title":["Genome-wide analysis of the FBA gene family in soybean and their expression profile under salt-alkali stress"],"prefix":"10.3389","volume":"17","author":[{"given":"Xinyan","family":"Zhao","sequence":"first","affiliation":[{"name":"College of Agriculture and Biology, Liaocheng University","place":["Liaocheng, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yawen","family":"Zhan","sequence":"additional","affiliation":[{"name":"College of Agriculture and Biology, Liaocheng University","place":["Liaocheng, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shuangjin","family":"Fan","sequence":"additional","affiliation":[{"name":"College of Agriculture and Biology, Liaocheng University","place":["Liaocheng, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Le","family":"Wang","sequence":"additional","affiliation":[{"name":"College of Agriculture and Biology, Liaocheng University","place":["Liaocheng, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chenxi","family":"Zang","sequence":"additional","affiliation":[{"name":"College of Agriculture and Biology, Liaocheng University","place":["Liaocheng, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yongwang","family":"Sun","sequence":"additional","affiliation":[{"name":"College of Agriculture and Biology, Liaocheng University","place":["Liaocheng, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2026,9,10]]},"reference":[{"key":"B1","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2023.1097001","article-title":"Uncovering the salt response of soybean by unraveling its wild and cultivated functional genomes using tag sequencing","volume":"7","author":"Ali","year":"2012","journal-title":"PLoS One"},{"key":"B2","doi-asserted-by":"publisher","first-page":"245","DOI":"10.1007\/BF00201381","article-title":"Enzyme-enzyme interaction in the chloroplast: glyceraldehyde-3-phosphate dehydrogenase, triose phosphate isomerase and aldolase","volume":"196","author":"Anderson","year":"1995","journal-title":"Planta"},{"key":"B3","doi-asserted-by":"publisher","first-page":"109","DOI":"10.1038\/s41586-019-1679-0","article-title":"Genetic strategies for improving crop yields","volume":"575","author":"Bailey-Serres","year":"2019","journal-title":"Nature"},{"key":"B4","doi-asserted-by":"publisher","first-page":"447","DOI":"10.1038\/nrmicro2365","article-title":"Autotrophic carbon fixation in archaea","volume":"8","author":"Berg","year":"2010","journal-title":"Nat. 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