{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,12]],"date-time":"2026-08-12T06:31:54Z","timestamp":1786516314970,"version":"build-2736575974"},"reference-count":70,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2026,8,12]],"date-time":"2026-08-12T00:00:00Z","timestamp":1786492800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Plant Sci."],"abstract":"<jats:sec>\n                    <jats:title>Introduction<\/jats:title>\n                    <jats:p>The mitochondrial genomes of plants in extreme environments often harbor distinctive evolutionary signals. However, the differences between karstic and non-karstic species remain unclear.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Methods<\/jats:title>\n                    <jats:p>\n                      In this study, the complete mitochondrial genome of karstic species\n                      <jats:italic>Hemiboea subcapitata<\/jats:italic>\n                      (Gesneriaceae) was assembled and annotated.The selective pressure, nucleotide diversity and nucleotide substitution spectrum within Lamiales were conducted to investigate the adaptation pattern of mitochondrial protein-coding genes (PCGs) between karstic and non-karstic species. Further, the phylogenetic conflicts of Lamiales based on mitochondrial and chloroplast PCGs were assessed.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>\n                      The assembled mitochondrial genome of\n                      <jats:italic>H. subcapitata<\/jats:italic>\n                      is a circular molecule of 621,547 bp with 43.6% GC content, and 67 genes were annotated, including 37 PCGs, 27 tRNA genes, and 3 rRNA genes. Our analyses identified 121 SSRs and 450 RNA editing sites of\n                      <jats:italic>H. subcapitata<\/jats:italic>\n                      . Within Gesneriaceae, the mitochondrial showed the diverse genome structure and gene composition, and the conserved GC content. Strikingly, three genes (\n                      <jats:italic>atp4<\/jats:italic>\n                      ,\n                      <jats:italic>atp8<\/jats:italic>\n                      , and\n                      <jats:italic>ccmB<\/jats:italic>\n                      ) exhibited elevated nonsynonymous\/synonymous ratios (Ka\/Ks) both in karstic and non-karstic Lamiales species, while only rps10 with Ka\/Ks &amp;gt;1 in karstic species. The mutational spectrum showed that transition was the predominant type in both karstic and non-karstic Lamiales species. Furthermore, five genes (\n                      <jats:italic>atp1, atp9, rpl2, rpl5<\/jats:italic>\n                      and\n                      <jats:italic>sdh3<\/jats:italic>\n                      ) with highest Pi values were the candidate hypervariable regions of Lamiales. Phylogenetic conflicts between mitochondrial and chloroplast PCGs was mainly related to incomplete lineage sorting.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Discussion<\/jats:title>\n                    <jats:p>This study revealed the differences of mitochondrial genomes in karstic and non-karstic species plants across Lamiales and highlighted the impact of habitat on organellar genome evolution.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.3389\/fpls.2026.1921030","type":"journal-article","created":{"date-parts":[[2026,8,12]],"date-time":"2026-08-12T06:00:12Z","timestamp":1786514412000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":0,"title":["The complete mitochondrial genome of Hemiboea subcapitata (Gesneriaceae) and comparative analysis across Lamiales"],"prefix":"10.3389","volume":"17","author":[{"given":"Ru-Yang","family":"Ye","sequence":"first","affiliation":[{"name":"School of Life Sciences, Institute of Advanced Agricultural Sciences","place":["Nanchang, Jiangxi, China"]},{"name":"School of Life Sciences, Key Laboratory of Poyang Lake Environment and Resource Utilization Ministry of Education, Nanchang University","place":["Nanchang, Jiangxi, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Peng","family":"Zhou","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Institute of Advanced Agricultural Sciences","place":["Nanchang, Jiangxi, China"]},{"name":"School of Life Sciences, Key Laboratory of Poyang Lake Environment and Resource Utilization Ministry of Education, Nanchang University","place":["Nanchang, Jiangxi, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xiao-Guo","family":"Xiang","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Key Laboratory of Poyang Lake Environment and Resource Utilization Ministry of Education, Nanchang University","place":["Nanchang, Jiangxi, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jin-Long","family":"Liu","sequence":"additional","affiliation":[{"name":"School of Life Sciences, Institute of Advanced Agricultural Sciences","place":["Nanchang, Jiangxi, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2026,8,12]]},"reference":[{"key":"B1","doi-asserted-by":"publisher","first-page":"1436","DOI":"10.1093\/molbev\/msq029","article-title":"Insights into the evolution of mitochondrial genome size from complete sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae)","volume":"27","author":"Alverson","year":"2010","journal-title":"Mol. 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