{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,31]],"date-time":"2026-10-31T04:19:46Z","timestamp":1793420386280,"version":"4.5.0"},"reference-count":79,"publisher":"Frontiers Media SA","license":[{"start":{"date-parts":[[2020,9,29]],"date-time":"2020-09-29T00:00:00Z","timestamp":1601337600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100004423","name":"World Health Organization","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100004423","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004837","name":"Ministerio de Ciencia e Innovaci\u00f3n","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100004837","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003359","name":"Generalitat Valenciana","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100003359","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100008530","name":"European Regional Development Fund","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100008530","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["frontiersin.org"],"crossmark-restriction":true},"short-container-title":["Front. Vet. Sci."],"DOI":"10.3389\/fvets.2020.547891","type":"journal-article","created":{"date-parts":[[2020,9,29]],"date-time":"2020-09-29T08:15:00Z","timestamp":1601367300000},"update-policy":"https:\/\/doi.org\/10.3389\/crossmark-policy","source":"Crossref","is-referenced-by-count":61,"title":["Genomic Epidemiology of Salmonella Infantis in Ecuador: From Poultry Farms to Human Infections"],"prefix":"10.3389","volume":"7","author":[{"given":"Lorena","family":"Mej\u00eda","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jos\u00e9 Luis","family":"Medina","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rosa","family":"Bayas","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Carolina Satan","family":"Salazar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fernando","family":"Villavicencio","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sonia","family":"Zapata","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jorge","family":"Matheu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jaap A.","family":"Wagenaar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fernando","family":"Gonz\u00e1lez-Candelas","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christian","family":"Vinueza-Burgos","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1965","published-online":{"date-parts":[[2020,9,29]]},"reference":[{"key":"B1","first-page":"1","volume-title":"WHO Estimates of the Global Burden of Foodborne Diseases. Foodborne Disease Burden Epidemiolgy Reference Group 2007\u20132015","year":"2015"},{"key":"B2","doi-asserted-by":"publisher","first-page":"110","DOI":"10.1016\/j.cmi.2015.12.004","article-title":"Salmonellosis: the role of poultry meat","volume":"22","author":"Antunes","year":"2016","journal-title":"Clin Microbiol Infect."},{"key":"B3","doi-asserted-by":"publisher","first-page":"e05596","DOI":"10.2903\/j.efsa.2019.5596","article-title":"Salmonella control in poultry flocks and its public health impact","volume":"17","author":"Koutsoumanis","year":"2019","journal-title":"EFSA J."},{"key":"B4","unstructured":"Estad\u00edsticas Del Sector Av\u00edcola2020"},{"key":"B5","doi-asserted-by":"publisher","first-page":"751","DOI":"10.4315\/0362-028X.JFP-14-349","article-title":"Prevalence, resistance patterns, and risk factors for antimicrobial resistance in bacteria from retail chicken meat in Colombia","volume":"78","author":"Donado-Godoy","year":"2015","journal-title":"J Food Prot."},{"key":"B6","article-title":"Estudio de prevalencia de serotipos de salmonella en granjas av\u00edcolas tecnificadas en el per\u00fa","author":"Valderrama","year":"2014"},{"key":"B7","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.ijfoodmicro.2019.03.014","article-title":"Occurrence, genotypes and antimicrobial susceptibility of salmonella collected from the broiler production chain within an integrated poultry company","volume":"299","author":"Vinueza-Burgos","year":"2019","journal-title":"Int J Food Microbiol."},{"key":"B8","doi-asserted-by":"publisher","first-page":"e0159567","DOI":"10.1371\/journal.pone.0159567","article-title":"Prevalence and diversity of salmonella serotypes in ecuadorian broilers at slaughter age","volume":"11","author":"Vinueza-Burgos","year":"2016","journal-title":"PLoS ONE."},{"key":"B9","doi-asserted-by":"publisher","first-page":"433","DOI":"10.3382\/ps\/peu081","article-title":"A temporal study of salmonella enterica serotypes from broiler farms in Brazil","volume":"94","author":"Voss-Rech","year":"2015","journal-title":"Poult Sci."},{"key":"B10","doi-asserted-by":"publisher","first-page":"2284","DOI":"10.3201\/eid2412.180500","article-title":"CTX-M-65 extended-spectrum \u03b2-lactamase\u2013producing salmonella enterica serotype infantis, united states1","volume":"24","author":"Brown","year":"2018","journal-title":"Emerg Infect Dis."},{"key":"B11","doi-asserted-by":"publisher","first-page":"406","DOI":"10.1016\/j.bjid.2016.03.007","article-title":"Characterization of a small outbreak of salmonella enterica serovar infantis that harbour CTX-M-65 in ecuador","volume":"20","author":"Cartelle Gestal","year":"2016","journal-title":"Brazilian J Infect Dis."},{"key":"B12","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1128\/AAC.00488-17","article-title":"Comparative analysis of extended-spectrum-\u03b2-lactamase CTX-M-65-producing salmonella enterica serovar infantis isolates from humans, food animals, and retail chickens in the united states","volume":"61","author":"Tate","year":"2017","journal-title":"Antimicrob Agents Chemother."},{"key":"B13","doi-asserted-by":"publisher","first-page":"780","DOI":"10.1128\/9781555819804.ch12","article-title":"Antimicrobial resistance in nontyphoidal salmonella","volume":"6","author":"McDermott","year":"2018","journal-title":"Microbiol Spectr."},{"key":"B14","doi-asserted-by":"publisher","first-page":"1579","DOI":"10.1111\/j.1462-5822.2009.01368.x","article-title":"Salmonella - the ultimate insider. Salmonella virulence factors that modulate intracellular survival","volume":"11","author":"Ibarra","year":"2009","journal-title":"Cell Microbiol."},{"key":"B15","unstructured":"Integrated Surveillance of Antimicrobial Resistance in Foodborne Bacteria2017"},{"key":"B16","doi-asserted-by":"publisher","first-page":"9","DOI":"10.1016\/j.mimet.2011.02.002","article-title":"Rapid identification of salmonella enterica serovars, typhimurium, choleraesuis, infantis, hadar, enteritidis, dublin and gallinarum, by multiplex PCR","volume":"85","author":"Akiba","year":"2011","journal-title":"J Microbiol Methods."},{"key":"B17","first-page":"32","article-title":"Performance standards for antimicrobial susceptibility testing; twenty-nine informational supplement","volume-title":"CLSI Document M100-S29","author":"Weinstein","year":"2019"},{"key":"B18","doi-asserted-by":"publisher","first-page":"115","DOI":"10.1093\/jac\/dki190","article-title":"\u03b2-Lactamases among extended-spectrum beta-lactamase (ESBL)-resistant Salmonella from poultry, poultry products and human patients in The Netherlands","volume":"56","author":"Hasman","year":"2005","journal-title":"J Antimicrob Chemother."},{"key":"B19","doi-asserted-by":"publisher","first-page":"334","DOI":"10.1089\/mdr.2004.10.334","article-title":"Prevalence of beta-lactamases among ampicillin-resistant Escherichia coli and salmonella isolated from food animals in Denmark","volume":"10","author":"Olesen","year":"2004","journal-title":"Microb Drug Resist."},{"key":"B20","doi-asserted-by":"publisher","first-page":"4263","DOI":"10.1128\/AAC.48.11.4263-4270.2004","article-title":"Infections with nontyphoidal salmonella species producing TEM-63 or a novel TEM enzyme, TEM-131, in South Africa","volume":"48","author":"Kruger","year":"2004","journal-title":"Antimicrob Agents Chemother."},{"key":"B21","doi-asserted-by":"publisher","first-page":"163","DOI":"10.1016\/S0378-1097(97)00196-1","article-title":"Substitution of alanine for aspartate at position 179 in the SHV-6 extended-spectrum beta-lactamase","volume":"152","author":"Arlet","year":"1997","journal-title":"FEMS Microbiol Lett."},{"key":"B22","doi-asserted-by":"publisher","first-page":"103","DOI":"10.1128\/JCM.01542-07","article-title":"Molecular epidemiology of Escherichia coli producing extended-spectrum beta-lactamases isolated in Rome, Italy","volume":"46","author":"Carattoli","year":"2008","journal-title":"J Clin Microbiol."},{"key":"B23","doi-asserted-by":"publisher","first-page":"2990","DOI":"10.1128\/AAC.01511-05","article-title":"Detection of extended-spectrum beta-lactamases in clinical isolates of pseudomonas aeruginosa","volume":"50","author":"Jiang","year":"2006","journal-title":"Antimicrob Agents Chemother."},{"key":"B24","doi-asserted-by":"publisher","first-page":"180","DOI":"10.1016\/j.ijantimicag.2006.03.027","article-title":"Characterisation of CTX-M and AmpC genes in human isolates of Escherichia coli identified between 1995 and 2003 in England and Wales","volume":"28","author":"Hopkins","year":"2006","journal-title":"Int J Antimicrob Agents."},{"key":"B25","doi-asserted-by":"publisher","first-page":"807","DOI":"10.3201\/eid1205.050910","article-title":"Enterobacter cloacae outbreak and emergence of quinolone resistance gene in Dutch hospital","volume":"12","author":"Paauw","year":"2006","journal-title":"Emerg Infect Dis."},{"key":"B26","doi-asserted-by":"publisher","first-page":"1368","DOI":"10.1093\/jac\/dks049","article-title":"Occurrence and characteristics of extended-spectrum-\u03b2-lactamase- and AmpC-producing clinical isolates derived from companion animals and horses","volume":"67","author":"Dierikx","year":"2012","journal-title":"J Antimicrob Chemother."},{"key":"B27","doi-asserted-by":"publisher","first-page":"2640","DOI":"10.1093\/jac\/dks261","article-title":"Identification of acquired antimicrobial resistance genes","volume":"67","author":"Zankari","year":"2012","journal-title":"J Antimicrob Chemother."},{"key":"B28","doi-asserted-by":"publisher","first-page":"2114","DOI":"10.1093\/bioinformatics\/btu170","article-title":"Trimmomatic: a flexible trimmer for illumina sequence data","volume":"30","author":"Bolger","year":"2014","journal-title":"Bioinformatics."},{"key":"B29","doi-asserted-by":"publisher","first-page":"1338","DOI":"10.12688\/f1000research.15931.2","article-title":"FastQ screen: a tool for multi-genome mapping and quality control","volume":"7","author":"Wingett","year":"2018","journal-title":"F1000Research."},{"key":"B30","doi-asserted-by":"publisher","first-page":"3047","DOI":"10.1093\/bioinformatics\/btw354","article-title":"MultiQC: summarize analysis results for multiple tools and samples in a single report","volume":"32","author":"Ewels","year":"2016","journal-title":"Bioinformatics."},{"key":"B31","doi-asserted-by":"publisher","first-page":"1685","DOI":"10.1128\/JCM.00323-15","article-title":"Salmonella serotype determination utilizing high-throughput genome sequencing data","volume":"53","author":"Zhang","year":"2015","journal-title":"J Clin Microbiol."},{"key":"B32","doi-asserted-by":"publisher","first-page":"e000131","DOI":"10.1099\/mgen.0.000131","article-title":"ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads","volume":"3","author":"Hunt","year":"2017","journal-title":"Microb Genomics."},{"key":"B33","doi-asserted-by":"publisher","first-page":"124","DOI":"10.12688\/wellcomeopenres.14826.1","article-title":"Open-access bacterial population genomics: BIGSdb software, the PubMLST.org website and their applications","volume":"3","author":"Jolley","year":"2018","journal-title":"Wellcome Open Res."},{"key":"B34","doi-asserted-by":"publisher","first-page":"3895","DOI":"10.1128\/AAC.02412-14","article-title":"In silico detection and typing of plasmids using plasmidfinder and plasmid multilocus sequence typing","volume":"58","author":"Carattoli","year":"2014","journal-title":"Antimicrob Agents Chemother."},{"key":"B35","doi-asserted-by":"publisher","first-page":"e00826","DOI":"10.1128\/MRA.00826-19","article-title":"Whole-genome sequencing of a salmonella enterica subsp. Enterica serovar infantis strain isolated from broiler chicken in Peru","volume":"8","author":"Vallejos-S\u00e1nchez","year":"2019","journal-title":"Microbiol Resour Announc."},{"key":"B36","doi-asserted-by":"publisher","first-page":"589","DOI":"10.1093\/bioinformatics\/btp698","article-title":"Fast and accurate long-read alignment with burrows-wheeler transform","volume":"26","author":"Li","year":"2010","journal-title":"Bioinformatics."},{"key":"B37","doi-asserted-by":"publisher","first-page":"2078","DOI":"10.1093\/bioinformatics\/btp352","article-title":"1000 genome project data processing subgroup. The sequence alignment\/map format and SAMtools","volume":"25","author":"Li","year":"2009","journal-title":"Bioinformatics"},{"key":"B38","volume-title":"Seqtk: Toolkit for Processing Sequences in FASTA\/Q Formats","author":"Li","year":"2012"},{"key":"B39","doi-asserted-by":"publisher","first-page":"1530","DOI":"10.1101\/849372","article-title":"IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era","volume":"37","author":"Minh","year":"2020","journal-title":"Mol Biol Evol."},{"key":"B40","doi-asserted-by":"publisher","first-page":"2068","DOI":"10.1093\/bioinformatics\/btu153","article-title":"Prokka: rapid prokaryotic genome annotation","volume":"30","author":"Seemann","year":"2014","journal-title":"Bioinformatics."},{"key":"B41","doi-asserted-by":"publisher","first-page":"124","DOI":"10.1186\/1471-2105-12-124","article-title":"Proteinortho: detection of (co-)orthologs in large-scale analysis","volume":"12","author":"Lechner","year":"2011","journal-title":"BMC Bioinformatics."},{"key":"B42","doi-asserted-by":"publisher","first-page":"e4958","DOI":"10.7717\/peerj.4958","article-title":"D-GENIES: dot plot large genomes in an interactive, efficient and simple way","volume":"6","author":"Cabanettes","year":"2018","journal-title":"PeerJ."},{"key":"B43","doi-asserted-by":"publisher","first-page":"e11147","DOI":"10.1371\/journal.pone.0011147","article-title":"Progressivemauve: multiple genome alignment with gene gain, loss and rearrangement","volume":"5","author":"Darling","year":"2010","journal-title":"PLoS ONE."},{"key":"B44","doi-asserted-by":"publisher","first-page":"1281","DOI":"10.1007\/s10482-017-0844-4","article-title":"A large-scale evaluation of algorithms to calculate average nucleotide identity","volume":"110","author":"Yoon","year":"2017","journal-title":"Antonie Van Leeuwenhoek."},{"key":"B45","first-page":"158","article-title":"Assembling genomes mini-metagenomes from highly chimeric reads","volume-title":"Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence Lecture Notes in Bioinformatics).","author":"Nurk","year":"2011"},{"key":"B46","doi-asserted-by":"publisher","first-page":"3059","DOI":"10.1093\/nar\/gkf436","article-title":"MAFFT: a novel method for rapid multiple sequence alignment based on fast fourier transform","volume":"30","author":"Katoh","year":"2002","journal-title":"Nucleic Acids Res."},{"key":"B47","doi-asserted-by":"publisher","first-page":"W256","DOI":"10.1093\/nar\/gkz239","article-title":"Interactive tree of life (iTOL) v4: recent updates and new developments","volume":"47","author":"Letunic","year":"2019","journal-title":"Nucleic Acids Res."},{"key":"B48","doi-asserted-by":"publisher","first-page":"887","DOI":"10.1089\/fpd.2010.0787","article-title":"Global monitoring of salmonella serovar distribution from the world health organization global foodborne infections network country data bank: results of quality assured laboratories from 2001 to 2007","volume":"8","author":"Hendriksen","year":"2011","journal-title":"Foodborne Pathog Dis."},{"key":"B49","doi-asserted-by":"publisher","first-page":"e5077","DOI":"10.2903\/j.efsa.2014.3547","article-title":"The European union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2012","volume":"12","year":"2014","journal-title":"EFSA J."},{"key":"B50","doi-asserted-by":"publisher","first-page":"870","DOI":"10.1186\/s12864-019-6260-6","article-title":"WGS based study of the population structure of salmonella enterica serovar infantis","volume":"20","author":"Gymoese","year":"2019","journal-title":"BMC Genomics."},{"key":"B51","doi-asserted-by":"publisher","first-page":"874","DOI":"10.4315\/0362-028X.JFP-11-458","article-title":"Prevalence, risk factors, and antimicrobial resistance profiles of salmonella from commercial broiler farms in two important poultry-producing regions of Colombia","volume":"75","author":"Donado-Godoy","year":"2012","journal-title":"J Food Prot."},{"key":"B52","volume-title":"Aislamiento y serotipificaci\u00f3n de salmonella enteritidis, typhimurium e infantis en carcasas de pollo destinadas para consumo humano en un camal industrializado de la provincia de pichincha","author":"Villagomez","year":"2015"},{"key":"B53","doi-asserted-by":"publisher","first-page":"563","DOI":"10.4269\/ajtmh.13-0744","article-title":"Identifying etiological agents causing diarrhea in low income ecuadorian communities","volume":"91","author":"Vasco","year":"2014","journal-title":"Am J Trop Med Hyg."},{"key":"B54","doi-asserted-by":"publisher","first-page":"1106","DOI":"10.1002\/jmv.21181","article-title":"Prevalence of VP4 and VP7 genotypes of human rotavirus in ecuadorian children with acute diarrhea","volume":"80","author":"Naranjo","year":"2008","journal-title":"J Med Virol."},{"key":"B55","first-page":"333","article-title":"Acute diarrhea associated with a campylobacter and other pathogenic agents in Quito, Ecuador","volume":"102","author":"Guderian","year":"1987","journal-title":"Bolet\u00edn Of Sanit Panam."},{"key":"B56","doi-asserted-by":"publisher","first-page":"387","DOI":"10.1093\/aje\/kws220","article-title":"Synergistic effects between rotavirus and coinfecting pathogens on diarrheal disease: evidence from a community-based study in northwestern ecuador","volume":"176","author":"Bhavnani","year":"2012","journal-title":"Am J Epidemiol."},{"key":"B57","doi-asserted-by":"publisher","first-page":"648","DOI":"10.1016\/j.tim.2014.06.007","article-title":"Salmonella chronic carriage: epidemiology, diagnosis, and gallbladder persistence","volume":"22","author":"Gunn","year":"2014","journal-title":"Trends Microbiol."},{"key":"B58","doi-asserted-by":"publisher","first-page":"e05500","DOI":"10.2903\/j.efsa.2018.5500","article-title":"The European union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2017","volume":"16","author":"Food","year":"2018","journal-title":"EFSA J."},{"key":"B59","doi-asserted-by":"publisher","first-page":"2030","DOI":"10.4315\/0362-028X-70.9.2030","article-title":"Reduced susceptibility to quinolones among salmonella serotypes isolated from poultry at slaughter in venezuela","volume":"70","author":"Bosc\u00e1n-Duque","year":"2007","journal-title":"J Food Prot."},{"key":"B60","doi-asserted-by":"publisher","first-page":"555","DOI":"10.1590\/S1020-49892011001200010","article-title":"Prevalence and antimicrobial resistance of salmonella in chicken carcasses at retail in 15 Brazilian cities","volume":"30","author":"Medeiros","year":"2011","journal-title":"Rev Panam Salud Publica."},{"key":"B61","doi-asserted-by":"publisher","first-page":"1049","DOI":"10.3390\/ani10061049","article-title":"Phenotypic and genotypic characterization of virulence factors and susceptibility to antibiotics in salmonella infantis strains isolated from chicken meat: first findings in chile","volume":"10","author":"Lapierre","year":"2020","journal-title":"Animals."},{"key":"B62","doi-asserted-by":"publisher","first-page":"4273","DOI":"10.1128\/AEM.00598-11","article-title":"Population dynamics of salmonella enterica serotypes in commercial egg and poultry production","volume":"77","author":"Foley","year":"2011","journal-title":"Appl Environ Microbiol."},{"key":"B63","doi-asserted-by":"publisher","first-page":"1373","DOI":"10.3382\/ps\/pex406","article-title":"Salmonella isolated from chicken carcasses from a slaughterhouse in the state of mato grosso, Brazil: antibiotic resistance profile, serotyping, and characterization by repetitive sequence-based PCR system","volume":"97","author":"Da","year":"2018","journal-title":"Poult Sci."},{"key":"B64","doi-asserted-by":"publisher","first-page":"32","DOI":"10.17843\/rpmesp.2016.331.1899","article-title":"Resistencia antimicrobiana de salmonella spp aislada de alimentos de origen animal para consumo humano","volume":"33","author":"Quesada","year":"2016","journal-title":"Rev Peru Med Exp Salud Publica."},{"key":"B65","doi-asserted-by":"publisher","first-page":"57","DOI":"10.1637\/10873-052714-Reg","article-title":"Characterization of salmonella from commercial egg-laying hen farms in a central region of Colombia","volume":"59","author":"Rodriguez","year":"2015","journal-title":"Avian Dis."},{"key":"B66","doi-asserted-by":"publisher","first-page":"e06007","DOI":"10.2903\/j.efsa.2020.6007","article-title":"The European union summary report on antimicrobial resistance in zoonotic and indicator bacteria from humans, animals and food in 2017\/2018","volume":"18","year":"2020","journal-title":"EFSA J."},{"key":"B67","volume-title":"Salmonella and Campylobacter in Broilers at Slaughter Age: A Possible Source for Carcasses Contamination in Ecuador","author":"Vinueza","year":"2017"},{"key":"B68","doi-asserted-by":"publisher","first-page":"5649","DOI":"10.1073\/pnas.1503141112","article-title":"Global trends in antimicrobial use in food animals","volume":"112","author":"Van Boeckel","year":"2015","journal-title":"Proc Natl Acad Sci USA."},{"key":"B69","doi-asserted-by":"publisher","first-page":"1322","DOI":"10.3389\/fmicb.2017.01322","article-title":"Salmonella enterica serovar infantis from food and human infections, Switzerland, 2010-2015: poultry-related multidrug resistant clones and an emerging ESBL producing clonal lineage","volume":"8","author":"Hindermann","year":"2017","journal-title":"Front Microbiol."},{"key":"B70","doi-asserted-by":"publisher","first-page":"108497","DOI":"10.1016\/j.ijfoodmicro.2019.108497","article-title":"Mega-plasmid found worldwide confers multiple antimicrobial resistance in salmonella infantis of broiler origin in Russia","volume":"319","author":"Bogomazova","year":"2020","journal-title":"Int J Food Microbiol."},{"key":"B71","doi-asserted-by":"publisher","first-page":"248","DOI":"10.1111\/jam.14282","article-title":"Detection and characterization of multidrug-resistant salmonella enterica serovar infantis as an emerging threat in poultry farms of faisalabad, Pakistan","volume":"127","author":"Wajid","year":"2019","journal-title":"J Appl Microbiol."},{"key":"B72","doi-asserted-by":"publisher","first-page":"670","DOI":"10.1016\/j.apjtb.2017.07.002","article-title":"Antibiotic susceptibility and molecular characterization of resistance genes among Escherichia coli and among salmonella subsp. in chicken food chains","volume":"7","author":"Vuthy","year":"2017","journal-title":"Asian Pac J Trop Biomed."},{"key":"B73","doi-asserted-by":"publisher","first-page":"977","DOI":"10.1111\/1462-2920.12351","article-title":"A unique megaplasmid contributes to stress tolerance and pathogenicity of an emergent salmonella enterica serovar infantis strain","volume":"16","author":"Aviv","year":"2014","journal-title":"Environ Microbiol."},{"key":"B74","doi-asserted-by":"publisher","first-page":"e0144802","DOI":"10.1371\/journal.pone.0144802","article-title":"Emergence of a clonal lineage of multidrug-resistant ESBL-producing salmonella infantis transmitted from broilers and broiler meat to humans in Italy between 2011 and 2014","volume":"10","author":"Franco","year":"2015","journal-title":"PLoS ONE."},{"key":"B75","doi-asserted-by":"publisher","first-page":"223","DOI":"10.1093\/gbe\/evaa048","article-title":"Genome sequence of an emerging salmonella enterica serovar infantis and genomic comparison with other S. infantis strains","volume":"12","author":"Cohen","year":"2020","journal-title":"Genome Biol Evol."},{"key":"B76","doi-asserted-by":"publisher","first-page":"3156","DOI":"10.1128\/IAI.01428-05","article-title":"Salmonella enterica serovar typhimurium requires the Lpf, Pef, and Tafi fimbriae for biofilm formation on HEp-2 tissue culture cells and chicken intestinal epithelium","volume":"74","author":"Ledeboer","year":"2006","journal-title":"Infect Immun."},{"key":"B77","doi-asserted-by":"publisher","first-page":"2352","DOI":"10.1128\/JB.184.9.2352-2359.2002","article-title":"Population heterogeneity of salmonella enterica serotype typhimurium resulting from phase variation of the lpf operon in vitro and in vivo","volume":"184","author":"Kingsley","year":"2002","journal-title":"J Bacteriol"},{"key":"B78","doi-asserted-by":"publisher","first-page":"e0224518","DOI":"10.1371\/journal.pone.0224518","article-title":"Genomic comparison of diverse salmonella serovars isolated from swine","volume":"14","author":"Gupta","year":"2019","journal-title":"PLoS ONE."},{"key":"B79","doi-asserted-by":"publisher","first-page":"1255","DOI":"10.1046\/j.1365-2958.2002.03121.x","article-title":"Differential binding to and biofilm formation on, HEp-2 cells by salmonella enterica serovar typhimurium is dependent upon allelic variation in the fimH gene of the fim gene cluster","volume":"45","author":"Boddicker","year":"2002","journal-title":"Mol Microbiol."}],"container-title":["Frontiers in Veterinary Science"],"original-title":[],"link":[{"URL":"https:\/\/www.frontiersin.org\/article\/10.3389\/fvets.2020.547891\/full","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,9,29]],"date-time":"2020-09-29T08:15:17Z","timestamp":1601367317000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.frontiersin.org\/article\/10.3389\/fvets.2020.547891\/full"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,9,29]]},"references-count":79,"alternative-id":["10.3389\/fvets.2020.547891"],"URL":"https:\/\/doi.org\/10.3389\/fvets.2020.547891","relation":{},"ISSN":["2297-1769"],"issn-type":[{"value":"2297-1769","type":"electronic"}],"subject":[],"published":{"date-parts":[[2020,9,29]]},"article-number":"547891"}}