{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,5]],"date-time":"2026-10-05T19:27:39Z","timestamp":1791228459053,"version":"4.1.0"},"reference-count":79,"publisher":"MDPI AG","issue":"5","license":[{"start":{"date-parts":[[2018,5,8]],"date-time":"2018-05-08T00:00:00Z","timestamp":1525737600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"NIH\/NINDS","award":["R01 NS 097512-01A1"],"award-info":[{"award-number":["R01 NS 097512-01A1"]}]},{"name":"NSERC CREATE I3T","award":["413533-2012"],"award-info":[{"award-number":["413533-2012"]}]},{"DOI":"10.13039\/100005192","name":"CHRP","doi-asserted-by":"publisher","award":["478476-2015"],"award-info":[{"award-number":["478476-2015"]}],"id":[{"id":"10.13039\/100005192","id-type":"DOI","asserted-by":"publisher"}]},{"name":"CPG","award":["140174"],"award-info":[{"award-number":["140174"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Algorithms"],"abstract":"<jats:p>With the rapid increase in new fNIRS users employing commercial software, there is a concern that many studies are biased by suboptimal processing methods. The purpose of this study is to provide a visual reference showing the effects of different processing methods, to help inform researchers in setting up and evaluating a processing pipeline. We show the significant impact of pre- and post-processing choices and stress again how important it is to combine data from both hemoglobin species in order to make accurate inferences about the activation site.<\/jats:p>","DOI":"10.3390\/a11050067","type":"journal-article","created":{"date-parts":[[2018,5,8]],"date-time":"2018-05-08T05:51:47Z","timestamp":1525758707000},"page":"67","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":118,"title":["Automated Processing of fNIRS Data\u2014A Visual Guide to the Pitfalls and Consequences"],"prefix":"10.3390","volume":"11","author":[{"given":"Lia M.","family":"Hocke","sequence":"first","affiliation":[{"name":"Experimental Imaging Lab, Cumming School of Medicine, Hotchkiss Brain Institute, University of Calgary, Calgary, AB T2N 4Z6, Canada"},{"name":"McLean Imaging Center, McLean Hospital, Belmont, MA 02478, USA"},{"name":"Department of Psychiatry, Harvard Medical School, Boston, MA 02115, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ibukunoluwa K.","family":"Oni","sequence":"additional","affiliation":[{"name":"Experimental Imaging Lab, Cumming School of Medicine, Hotchkiss Brain Institute, University of Calgary, Calgary, AB T2N 4Z6, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chris C.","family":"Duszynski","sequence":"additional","affiliation":[{"name":"Experimental Imaging Lab, Cumming School of Medicine, Hotchkiss Brain Institute, University of Calgary, Calgary, AB T2N 4Z6, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alex V.","family":"Corrigan","sequence":"additional","affiliation":[{"name":"Experimental Imaging Lab, Cumming School of Medicine, Hotchkiss Brain Institute, University of Calgary, Calgary, AB T2N 4Z6, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Blaise deB.","family":"Frederick","sequence":"additional","affiliation":[{"name":"McLean Imaging Center, McLean Hospital, Belmont, MA 02478, USA"},{"name":"Department of Psychiatry, Harvard Medical School, Boston, MA 02115, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9728-2654","authenticated-orcid":false,"given":"Jeff F.","family":"Dunn","sequence":"additional","affiliation":[{"name":"Experimental Imaging Lab, Cumming School of Medicine, Hotchkiss Brain Institute, University of Calgary, Calgary, AB T2N 4Z6, Canada"},{"name":"Alberta Children\u2019s Hospital Research Institute, Calgary, AB T3B 6A8, Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1968","published-online":{"date-parts":[[2018,5,8]]},"reference":[{"key":"ref_1","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/j.neuroimage.2013.11.033","article-title":"Twenty years of functional near-infrared spectroscopy: Introduction for the special issue","volume":"85","author":"Boas","year":"2014","journal-title":"Neuroimage"},{"key":"ref_2","doi-asserted-by":"crossref","first-page":"78","DOI":"10.1016\/j.cobme.2017.09.011","article-title":"Functional near infrared spectroscopy: Enabling routine functional brain imaging","volume":"4","author":"Yucel","year":"2017","journal-title":"Curr. 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