{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,25]],"date-time":"2025-11-25T20:42:22Z","timestamp":1764103342110,"version":"build-2065373602"},"reference-count":46,"publisher":"MDPI AG","issue":"17","license":[{"start":{"date-parts":[[2022,9,3]],"date-time":"2022-09-03T00:00:00Z","timestamp":1662163200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100008566","name":"Tomsk State University Development Program","doi-asserted-by":"publisher","award":["Priority-2030"],"award-info":[{"award-number":["Priority-2030"]}],"id":[{"id":"10.13039\/501100008566","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Sensors"],"abstract":"<jats:p>The paper presents a diagnostic complex for plankton studies using the miniDHC (digital holographic camera). Its capabilities to study the rhythmic processes in plankton ecosystems were demonstrated using the natural testing in Lake Baikal in summer. The results of in situ measurements of plankton to detect the synchronization of collective biological rhythms with medium parameters are presented and interpreted. The most significant rhythms in terms of the correlation of their parameters with medium factors are identified. The study shows that the correlation with water temperature at the mooring site has the greatest significance and reliability. The results are verified with biodiversity data obtained by the traditional mesh method. The experience and results of the study can be used for the construction of a stationary station to monitor the ecological state of the water area through the digitalization of plankton behavior.<\/jats:p>","DOI":"10.3390\/s22176674","type":"journal-article","created":{"date-parts":[[2022,9,8]],"date-time":"2022-09-08T04:18:32Z","timestamp":1662610712000},"page":"6674","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":7,"title":["In Situ Measurements of Plankton Biorhythms Using Submersible Holographic Camera"],"prefix":"10.3390","volume":"22","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-1249-1922","authenticated-orcid":false,"given":"Victor","family":"Dyomin","sequence":"first","affiliation":[{"name":"Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9709-4263","authenticated-orcid":false,"given":"Alexandra","family":"Davydova","sequence":"additional","affiliation":[{"name":"Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-7089-1847","authenticated-orcid":false,"given":"Nikolay","family":"Kirillov","sequence":"additional","affiliation":[{"name":"Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sergey","family":"Morgalev","sequence":"additional","affiliation":[{"name":"Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Elena","family":"Naumova","sequence":"additional","affiliation":[{"name":"Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia"},{"name":"Laboratory of Ichtyology, Limnological Institute SB RAS, 3 Ulan-Batorskaya Street, 664033 Irkutsk, Russia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1886-7174","authenticated-orcid":false,"given":"Alexey","family":"Olshukov","sequence":"additional","affiliation":[{"name":"Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Igor","family":"Polovtsev","sequence":"additional","affiliation":[{"name":"Laboratory for Radiophysical and Optical Methods of Environmental Research, National Research Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"1968","published-online":{"date-parts":[[2022,9,3]]},"reference":[{"key":"ref_1","doi-asserted-by":"crossref","first-page":"237","DOI":"10.1126\/science.281.5374.237","article-title":"Primary production of the biosphere: Integrating terrestrial and oceanic components","volume":"281","author":"Field","year":"1998","journal-title":"Science"},{"key":"ref_2","doi-asserted-by":"crossref","first-page":"1261359","DOI":"10.1126\/science.1261359","article-title":"Ocean plankton. Structure and function of the global ocean microbiome","volume":"348","author":"Sunagawa","year":"2015","journal-title":"Science"},{"key":"ref_3","doi-asserted-by":"crossref","first-page":"12285","DOI":"10.1038\/ncomms12285","article-title":"High-order species interactions shape ecosystem diversity","volume":"7","author":"Bairey","year":"2016","journal-title":"Nat. Commun."},{"key":"ref_4","doi-asserted-by":"crossref","unstructured":"Lawrence, D., Fiegna, F., Behrend, V., Bundy, J.G., Phillimore, A.B., Bell, T., and Barraclough, T.G. (2012). Species interactions alter evolutionary responses to a novel environment. PLoS Biol., 10.","DOI":"10.1371\/journal.pbio.1001330"},{"key":"ref_5","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1146\/annurev-marine-121916-063304","article-title":"How Do Marine Pelagic Species Respond to Climate Change? Theories and Observations","volume":"10","author":"Beaugrand","year":"2018","journal-title":"Annu. Rev. Mar. Sci."},{"key":"ref_6","doi-asserted-by":"crossref","first-page":"237","DOI":"10.1038\/s41558-019-0420-1","article-title":"Prediction of unprecedented biological shifts in the global ocean","volume":"9","author":"Beaugrand","year":"2019","journal-title":"Nat. Clim. Chang."},{"key":"ref_7","doi-asserted-by":"crossref","first-page":"2964","DOI":"10.1073\/pnas.1519080113","article-title":"Anthropogenic climate change drives shift and shuffle in North Atlantic phytoplankton communities","volume":"113","author":"Barton","year":"2016","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"ref_8","doi-asserted-by":"crossref","first-page":"17058","DOI":"10.1038\/nmicrobiol.2017.58","article-title":"Microorganisms and ocean global change","volume":"2","author":"Hutchins","year":"2017","journal-title":"Nat. Microbiol."},{"key":"ref_9","doi-asserted-by":"crossref","first-page":"159","DOI":"10.1101\/SQB.1960.025.01.015","article-title":"Circadian Rhythms and the Circadian Organization of Living Systems","volume":"25","author":"Pittendrigh","year":"1960","journal-title":"Cold Spring Harb. Symp. Quant. Biol."},{"key":"ref_10","first-page":"102717","article-title":"Patterns of Mesozooplankton Community Composition and Vertical Fluxes in the Global Ocean","volume":"200","author":"Soviadan","year":"2021","journal-title":"Ecology"},{"key":"ref_11","doi-asserted-by":"crossref","unstructured":"Aschoff, J. (1981). A Survey on Biological Rhythms. Biological Rhythms, Springer.","DOI":"10.1007\/978-1-4615-6552-9"},{"key":"ref_12","unstructured":"(2022, June 01). How Road Salt and Other Environmental Pollution Disrupts the Circadian Rhythm. Available online: https:\/\/www.chronobiology.com\/how-road-salt-and-other-environmental-pollution-disrupts-the-circadian-rhythm\/."},{"key":"ref_13","doi-asserted-by":"crossref","first-page":"664","DOI":"10.3389\/fmars.2019.00644","article-title":"Virtual Reality and Oceanography: Overview, Applications, and Perspective","volume":"6","author":"Walcutt","year":"2019","journal-title":"Front. Mar. Sci."},{"key":"ref_14","doi-asserted-by":"crossref","first-page":"36","DOI":"10.1016\/j.mio.2015.07.001","article-title":"ZOOPS-O2: A broadband echosounder with coordinated stereo optical imaging for observing plankton in situ","volume":"12","author":"Roberts","year":"2015","journal-title":"Methods Oceanogr."},{"key":"ref_15","first-page":"126","article-title":"In situ ichthyoplankton imaging system (ISIIS): System design and preliminary results. Limnol. Oceanogr","volume":"6","author":"Cowen","year":"2008","journal-title":"Methods"},{"key":"ref_16","first-page":"195","article-title":"A submersible imaging-in-flow instrument to analyze nano-and microplankton: Imaging FlowCytobot. Limnol. Oceanogr","volume":"5","author":"Olson","year":"2007","journal-title":"Methods"},{"key":"ref_17","first-page":"41","article-title":"Application of in-situ digital holography in the study of particles, organisms and bubbles within their natural environment","volume":"83720","author":"Talapatra","year":"2012","journal-title":"Proc. SPIE"},{"key":"ref_18","doi-asserted-by":"crossref","first-page":"1042","DOI":"10.1111\/2041-210X.13441","article-title":"The In situ Plankton Assemblage eXplorer (IPAX): An inexpensive underwater imaging system for zooplankton study","volume":"11","author":"Lertvilai","year":"2020","journal-title":"Methods Ecol. Evol."},{"key":"ref_19","doi-asserted-by":"crossref","first-page":"115","DOI":"10.1002\/lom3.10475","article-title":"The Underwater Vision Profiler 6: An Imaging Sensor of Particle Size Spectra and Plankton, for Autonomous and Cabled Platforms","volume":"20","author":"Picheral","year":"2022","journal-title":"Limnol. Oceanogr. Methods"},{"key":"ref_20","doi-asserted-by":"crossref","first-page":"1863","DOI":"10.1016\/j.cub.2013.08.038","article-title":"Dissociation of Circadian and Circatidal Timekeeping in the Marine Crustacean Eurydice Pulchra","volume":"23","author":"Zhang","year":"2013","journal-title":"Curr. Biol."},{"key":"ref_21","doi-asserted-by":"crossref","first-page":"1404","DOI":"10.1126\/science.220.4604.1404","article-title":"Reverse diel vertical migration\u2014An escape from invertebrate predators","volume":"220","author":"Ohman","year":"1983","journal-title":"Science"},{"key":"ref_22","doi-asserted-by":"crossref","first-page":"307","DOI":"10.2307\/1543573","article-title":"Spectral Sensitivity of Vertically Migrating Marine Copepods","volume":"203","author":"Cohen","year":"2002","journal-title":"Biol. Bull."},{"key":"ref_23","doi-asserted-by":"crossref","first-page":"2194","DOI":"10.1016\/j.cub.2017.06.025","article-title":"Circadian Clock Involvement in Zooplankton Diel Vertical Migration","volume":"27","author":"Meyer","year":"2017","journal-title":"Curr. Biol."},{"key":"ref_24","unstructured":"Hurley, J.M. (2022, February 25). Can Road Salt and Other Pollutants Disrupt Our Circadian Rhythms?. Available online: http:\/\/theconversation.com\/can-road-salt-and-other-pollutants-disrupt-our-circadian-rhythms-89211."},{"key":"ref_25","doi-asserted-by":"crossref","first-page":"653","DOI":"10.3389\/fmars.2020.00653","article-title":"Monitoring of plankton spatial and temporal characteristics with the use of a submersible digital holographic camera","volume":"7","author":"Dyomin","year":"2020","journal-title":"Front. Mar. Sci."},{"key":"ref_26","doi-asserted-by":"crossref","first-page":"1789","DOI":"10.1098\/rsta.2007.2187","article-title":"Underwater digital holography for studies of marine plankton","volume":"366","author":"Sun","year":"2008","journal-title":"Philos. Trans. R. Soc. A Math. Phys. Eng. Sci."},{"key":"ref_27","doi-asserted-by":"crossref","first-page":"091313","DOI":"10.1117\/1.3605678","article-title":"Submersible digital holographic cameras and their application to marine science","volume":"50","author":"Watson","year":"2011","journal-title":"Opt. Eng."},{"key":"ref_28","doi-asserted-by":"crossref","first-page":"28","DOI":"10.4319\/lom.2013.11.28","article-title":"Development and deployment of a point-source digital inline holographic microscope for the study of plankton and particles to a depth of 6000 m","volume":"11","author":"Bochdansky","year":"2013","journal-title":"Limnol. Oceanogr. Methods"},{"key":"ref_29","doi-asserted-by":"crossref","first-page":"1","DOI":"10.4172\/2155-9910.1000181","article-title":"A Submersible Holographic Microscope for 4-D In-Situ Studies of Micro-Organisms in the Ocean with Intensity and Quantitative Phase Imaging","volume":"06","author":"Rotermund","year":"2015","journal-title":"J. Mar. Sci. Res. Dev."},{"key":"ref_30","first-page":"92","article-title":"Miniaturized digital inline holographic camera for in-situ plankton detection","volume":"10821","author":"Guo","year":"2018","journal-title":"Proc. SPIE"},{"key":"ref_31","doi-asserted-by":"crossref","first-page":"1248","DOI":"10.1109\/JOE.2021.3066788","article-title":"Digital in-line holography for large-volume analysis of vertical motion of microscale marine plankton and other particles","volume":"46","author":"Liu","year":"2021","journal-title":"IEEE J. Ocean. Eng."},{"key":"ref_32","doi-asserted-by":"crossref","first-page":"G300","DOI":"10.1364\/AO.58.00G300","article-title":"Holography of particles for diagnostics tasks [Invited]","volume":"58","author":"Dyomin","year":"2019","journal-title":"Appl. Opt."},{"key":"ref_33","first-page":"1","article-title":"Hardware means for monitoring research of plankton in the habitat: Problems, state of the art, and prospects","volume":"17","author":"Dyomin","year":"2019","journal-title":"OCEANS 2019-Marseille"},{"key":"ref_34","doi-asserted-by":"crossref","unstructured":"Dyomin, V., Davydova, A., Polovtsev, I., Olshukov, A., Kirillov, N., and Davydov, S. (2021). Underwater Holographic Sensor for Plankton Studies In Situ including Accompanying Measurements. Sensors, 21.","DOI":"10.3390\/s21144863"},{"key":"ref_35","unstructured":"Robert, K.O., and Loren, E. (1978). Basic techniques. Applied Time Series Analysis, John Wiley & Sons Inc."},{"key":"ref_36","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1101\/SQB.1960.025.01.031","article-title":"Temporal coordination of physiologic function","volume":"25","author":"Halberg","year":"1960","journal-title":"Cold Spring Harb. Symp. Quant. Biol."},{"key":"ref_37","doi-asserted-by":"crossref","first-page":"3306","DOI":"10.1158\/1055-9965.EPI-08-0605","article-title":"Melatonin as a biomarker of circadian dysregulation","volume":"17","author":"Mirick","year":"2008","journal-title":"Cancer Epidemiol. Biomark. Prev."},{"key":"ref_38","doi-asserted-by":"crossref","first-page":"116","DOI":"10.1038\/248116a0","article-title":"Membrane model for the-circadian clock","volume":"248","author":"Njuis","year":"1974","journal-title":"Nature"},{"key":"ref_39","doi-asserted-by":"crossref","first-page":"183","DOI":"10.1111\/j.0022-3646.1989.00183.x","article-title":"A circadian rhythm in cell division in a prokaryote the cyanobacterium Synechococcus WH7803","volume":"25","author":"Sweeney","year":"1989","journal-title":"J. Phycol."},{"key":"ref_40","doi-asserted-by":"crossref","first-page":"339","DOI":"10.1046\/j.1365-2826.2003.00992.x","article-title":"The circadian clock: A manager of biochemical processes within the organism","volume":"15","author":"Holzberg","year":"2003","journal-title":"J. Neuroendocrinol."},{"key":"ref_41","first-page":"25","article-title":"A physiological model for circadian rhythms derived from the Acetabularia rhythm paradoxes","volume":"2","author":"Sweeney","year":"1974","journal-title":"Int. J. Chronobiol."},{"key":"ref_42","unstructured":"(2022, June 01). Weather in the World. Available online: https:\/\/rp5.ru\/Weather_in_the_world."},{"key":"ref_43","unstructured":"(2022, June 01). Svodka Izmerenii po Gidropostu pos. Uzur, o. Ol\u2019khon na r. Ozero Baikal Segodnia. (In Russian)."},{"key":"ref_44","doi-asserted-by":"crossref","unstructured":"Chaffron, S., Delage, E., Budinich, M., Vintache, D., Henry, N., Nef, C., Ardyna, M., Zayed, A.A., Junger, P.C., and Galand, P.E. (2020). Environmental vulnerability of the global ocean plankton community interactome. BioRxiv.","DOI":"10.1101\/2020.11.09.375295"},{"key":"ref_45","unstructured":"(2022, June 01). Baikal: Weather Statistics and Wind History. Available online: https:\/\/windy.app\/forecast2\/spot\/1998551\/Baikal\/map."},{"key":"ref_46","unstructured":"Kirillov, N., Dyomin, V., Davydova, A., Polovtsev, I., Morgalev, S., Naumova, E., and Olshukov, A. (2022). Data of Figure 5 and Figure 7. Figshare Dataset."}],"container-title":["Sensors"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.mdpi.com\/1424-8220\/22\/17\/6674\/pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,11]],"date-time":"2025-10-11T00:22:52Z","timestamp":1760142172000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.mdpi.com\/1424-8220\/22\/17\/6674"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022,9,3]]},"references-count":46,"journal-issue":{"issue":"17","published-online":{"date-parts":[[2022,9]]}},"alternative-id":["s22176674"],"URL":"https:\/\/doi.org\/10.3390\/s22176674","relation":{},"ISSN":["1424-8220"],"issn-type":[{"type":"electronic","value":"1424-8220"}],"subject":[],"published":{"date-parts":[[2022,9,3]]}}}