{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,26]],"date-time":"2026-10-26T19:51:36Z","timestamp":1793044296954,"version":"4.5.0"},"reference-count":105,"publisher":"MDPI AG","issue":"12","license":[{"start":{"date-parts":[[2015,12,17]],"date-time":"2015-12-17T00:00:00Z","timestamp":1450310400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IJMS"],"abstract":"<jats:p>Plants require water for growth and development, but excessive water negatively affects their productivity and viability. Flash floods occasionally result in complete submergence of plants in agricultural and natural ecosystems. When immersed in water, plants encounter multiple stresses including low oxygen, low light, nutrient deficiency, and high risk of infection. As floodwaters subside, submerged plants are abruptly exposed to higher oxygen concentration and greater light intensity, which can induce post-submergence injury caused by oxidative stress, high light, and dehydration. Recent studies have emphasized the significance of multiple stress tolerance in the survival of submergence and prompt recovery following desubmergence. A mechanistic understanding of acclimation responses to submergence at molecular and physiological levels can contribute to the deciphering of the regulatory networks governing tolerance to other environmental stresses that occur simultaneously or sequentially in the natural progress of a flood event.<\/jats:p>","DOI":"10.3390\/ijms161226226","type":"journal-article","created":{"date-parts":[[2015,12,17]],"date-time":"2015-12-17T10:47:37Z","timestamp":1450349257000},"page":"30164-30180","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":138,"title":["Plant Adaptation to Multiple Stresses during Submergence and Following Desubmergence"],"prefix":"10.3390","volume":"16","author":[{"given":"Bishal","family":"Tamang","sequence":"first","affiliation":[{"name":"Department of Crop and Soil Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9930-1318","authenticated-orcid":false,"given":"Takeshi","family":"Fukao","sequence":"additional","affiliation":[{"name":"Department of Crop and Soil Environmental Sciences, Virginia Tech, Blacksburg, VA 24061, USA"},{"name":"Translational Plant Sciences Program, Virginia Tech, Blacksburg, VA 24061, USA"},{"name":"Fralin Life Science Institute, Virginia Tech, Blacksburg, VA 24061, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1968","published-online":{"date-parts":[[2015,12,17]]},"reference":[{"key":"ref_1","doi-asserted-by":"crossref","first-page":"129","DOI":"10.1016\/j.tplants.2011.12.004","article-title":"Making sense of low oxygen sensing","volume":"17","author":"Fukao","year":"2012","journal-title":"Trends Plant. Sci."},{"key":"ref_2","doi-asserted-by":"crossref","first-page":"57","DOI":"10.1111\/nph.13209","article-title":"Flood adaptive traits and processes: An overview","volume":"206","author":"Voesenek","year":"2015","journal-title":"New Phytol."},{"key":"ref_3","doi-asserted-by":"crossref","first-page":"313","DOI":"10.1146\/annurev.arplant.59.032607.092752","article-title":"Flooding stress: Acclimations and genetic diversity","volume":"59","author":"Voesenek","year":"2008","journal-title":"Annu. Rev. Plant. Biol."},{"key":"ref_4","doi-asserted-by":"crossref","first-page":"181","DOI":"10.1093\/aob\/mcn121","article-title":"Rice germination and seedling growth in the absence of oxygen","volume":"103","author":"Magneschi","year":"2009","journal-title":"Ann. Bot."},{"key":"ref_5","doi-asserted-by":"crossref","first-page":"2211","DOI":"10.1111\/pce.12420","article-title":"Plant tolerance of flooding stress\u2014recent advances","volume":"37","author":"Colmer","year":"2014","journal-title":"Plant Cell Environ."},{"key":"ref_6","doi-asserted-by":"crossref","first-page":"1369","DOI":"10.1104\/pp.103.4.1369","article-title":"Long-distance water transport in aquatic plants","volume":"103","author":"Pedersen","year":"1993","journal-title":"Plant Physiol."},{"key":"ref_7","doi-asserted-by":"crossref","first-page":"93","DOI":"10.1016\/S0065-2504(08)60147-6","article-title":"Oxygen availability as an ecological limit to plant distribution","volume":"23","author":"Crawford","year":"1992","journal-title":"Adv. Ecol. Res."},{"key":"ref_8","doi-asserted-by":"crossref","first-page":"412","DOI":"10.1105\/tpc.110.080325","article-title":"The submergence tolerance regulator SUB1A mediates crosstalk between submergence and drought tolerance in rice","volume":"23","author":"Fukao","year":"2011","journal-title":"Plant. Cell"},{"key":"ref_9","doi-asserted-by":"crossref","first-page":"7","DOI":"10.1093\/jxb\/eru400","article-title":"Evolution under the sun: Optimizing light harvesting in photosynthesis","volume":"66","author":"Ruban","year":"2015","journal-title":"J. Exp. Bot."},{"key":"ref_10","doi-asserted-by":"crossref","first-page":"1096","DOI":"10.1071\/FP10025","article-title":"Desiccation of leaves after de-submergence is one cause for intolerance to complete submergence of the rice cultivar IR 42","volume":"37","author":"Setter","year":"2010","journal-title":"Funct. Plant. Biol."},{"key":"ref_11","doi-asserted-by":"crossref","first-page":"2158","DOI":"10.1126\/science.1063699","article-title":"Climate warming and disease risks for terrestrial and marine biota","volume":"296","author":"Harvell","year":"2002","journal-title":"Science"},{"key":"ref_12","doi-asserted-by":"crossref","first-page":"101","DOI":"10.1146\/annurev.phyto.121107.104959","article-title":"Role of stomata in plant innate immunity and foliar bacterial diseases","volume":"46","author":"Melotto","year":"2008","journal-title":"Annu. Rev. Phytopathol."},{"key":"ref_13","doi-asserted-by":"crossref","first-page":"138","DOI":"10.1097\/01.ss.0000187367.31094.e5","article-title":"Water stress and root injury from simulated flooding and Diaprepes abbreviatus root weevil larval feeding in citrus","volume":"171","author":"Li","year":"2006","journal-title":"Soil Sci."},{"key":"ref_14","doi-asserted-by":"crossref","first-page":"1295","DOI":"10.1093\/jxb\/ert007","article-title":"Soil abiotic factors influence interactions between belowground herbivores and plant roots","volume":"64","author":"Erb","year":"2013","journal-title":"J. Exp. Bot."},{"key":"ref_15","doi-asserted-by":"crossref","first-page":"705","DOI":"10.1038\/nature04920","article-title":"Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice","volume":"442","author":"Xu","year":"2006","journal-title":"Nature"},{"key":"ref_16","doi-asserted-by":"crossref","first-page":"196","DOI":"10.1016\/j.pbi.2013.02.003","article-title":"Genetic mechanisms conferring adaptation to submergence and drought in rice: Simple or complex?","volume":"16","author":"Fukao","year":"2013","journal-title":"Curr. Opin. Plant Biol."},{"key":"ref_17","doi-asserted-by":"crossref","first-page":"1441","DOI":"10.1007\/s00122-010-1400-z","article-title":"Molecular marker survey and expression analyses of the rice submergence-tolerance gene SUB1A","volume":"121","author":"Singh","year":"2010","journal-title":"Theor. Appl. Genet."},{"key":"ref_18","doi-asserted-by":"crossref","first-page":"2021","DOI":"10.1105\/tpc.106.043000","article-title":"A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice","volume":"18","author":"Fukao","year":"2006","journal-title":"Plant Cell"},{"key":"ref_19","doi-asserted-by":"crossref","first-page":"16814","DOI":"10.1073\/pnas.0807821105","article-title":"Submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellin responses in rice","volume":"105","author":"Fukao","year":"2008","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"ref_20","doi-asserted-by":"crossref","first-page":"1026","DOI":"10.1038\/nature08258","article-title":"The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water","volume":"460","author":"Hattori","year":"2009","journal-title":"Nature"},{"key":"ref_21","doi-asserted-by":"crossref","first-page":"1060","DOI":"10.1111\/nph.12202","article-title":"SUB1A-mediated submergence tolerance response in rice involves differential regulation of the brassinosteroid pathway","volume":"198","author":"Schmitz","year":"2013","journal-title":"New Phytol."},{"key":"ref_22","doi-asserted-by":"crossref","first-page":"2313","DOI":"10.1111\/pce.12377","article-title":"Gibberellin biosynthesis and signal transduction is essential for internode elongation in deepwater rice","volume":"37","author":"Ayano","year":"2014","journal-title":"Plant Cell Environ."},{"key":"ref_23","doi-asserted-by":"crossref","first-page":"1105","DOI":"10.1104\/pp.118.4.1105","article-title":"Deepwater rice: A model plant to study stem elongation","volume":"118","author":"Kende","year":"1998","journal-title":"Plant Physiol."},{"key":"ref_24","doi-asserted-by":"crossref","first-page":"43","DOI":"10.1016\/j.plantsci.2007.12.002","article-title":"Ethylene\u2014a key regulator of submergence responses in rice","volume":"175","author":"Fukao","year":"2008","journal-title":"Plant Sci."},{"key":"ref_25","doi-asserted-by":"crossref","first-page":"411","DOI":"10.1104\/pp.105.073783","article-title":"Genome-wide analysis of the ERF gene family in Arabidopsis and rice","volume":"140","author":"Nakano","year":"2006","journal-title":"Plant Physiol."},{"key":"ref_26","doi-asserted-by":"crossref","first-page":"302","DOI":"10.1111\/j.1365-313X.2010.04149.x","article-title":"HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana","volume":"62","author":"Licausi","year":"2010","journal-title":"Plant J."},{"key":"ref_27","doi-asserted-by":"crossref","first-page":"772","DOI":"10.1111\/tpj.12848","article-title":"The low oxygen, oxidative and osmotic stress responses synergistically act through the ethylene response factor VII genes RAP2.12, RAP2.2 and RAP2.3","volume":"82","author":"Papdi","year":"2015","journal-title":"Plant J."},{"key":"ref_28","doi-asserted-by":"crossref","first-page":"18843","DOI":"10.1073\/pnas.0906131106","article-title":"Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis","volume":"106","author":"Mustroph","year":"2009","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"ref_29","doi-asserted-by":"crossref","first-page":"757","DOI":"10.1104\/pp.110.155077","article-title":"Arabidopsis RAP2.2: An ethylene response transcription factor that is important for hypoxia survival","volume":"153","author":"Hinz","year":"2010","journal-title":"Plant Physiol."},{"key":"ref_30","doi-asserted-by":"crossref","first-page":"419","DOI":"10.1038\/nature10536","article-title":"Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization","volume":"479","author":"Licausi","year":"2011","journal-title":"Nature"},{"key":"ref_31","doi-asserted-by":"crossref","first-page":"135","DOI":"10.1016\/j.bbrc.2011.09.039","article-title":"AtERF71\/HRE2 transcription factor mediates osmotic stress response as well as hypoxia response in Arabidopsis","volume":"414","author":"Park","year":"2011","journal-title":"Biochem. Biophys. Res. Commun."},{"key":"ref_32","doi-asserted-by":"crossref","first-page":"1255","DOI":"10.1007\/s00299-014-1613-8","article-title":"Arabidopsis HRE1\u03b1, a splicing variant of AtERF73\/HRE1, functions as a nuclear transcription activator in hypoxia response and root development","volume":"33","author":"Seok","year":"2014","journal-title":"Plant Cell Rep."},{"key":"ref_33","doi-asserted-by":"crossref","unstructured":"Giuntoli, B., Lee, S.C., Licausi, F., Kosmacz, M., Oosumi, T., van Dongen, J.T., Bailey-Serres, J., and Perata, P. (2014). A trihelix DNA binding protein counterbalances hypoxia-responsive transcriptional activation in Arabidopsis. PLoS Biol., 12.","DOI":"10.1371\/journal.pbio.1001950"},{"key":"ref_34","doi-asserted-by":"crossref","first-page":"415","DOI":"10.1038\/nature10534","article-title":"Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants","volume":"479","author":"Gibbs","year":"2011","journal-title":"Nature"},{"key":"ref_35","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1104\/pp.15.00338","article-title":"Group VII Ethylene Response Factors coordinate oxygen and nitric oxide signal transduction and stress responses in plants","volume":"169","author":"Gibbs","year":"2015","journal-title":"Plant Physiol."},{"key":"ref_36","doi-asserted-by":"crossref","first-page":"603","DOI":"10.1016\/j.tcb.2014.05.001","article-title":"The eukaryotic N-end rule pathway: Conserved mechanisms and diverse functions","volume":"24","author":"Gibbs","year":"2014","journal-title":"Trends Cell Biol."},{"key":"ref_37","doi-asserted-by":"crossref","first-page":"369","DOI":"10.1016\/j.molcel.2013.12.020","article-title":"Nitric oxide sensing in plants is mediated by proteolytic control of group VII ERF transcription factors","volume":"53","author":"Gibbs","year":"2014","journal-title":"Mol. Cell"},{"key":"ref_38","doi-asserted-by":"crossref","first-page":"3425","DOI":"10.1038\/ncomms4425","article-title":"Plant cysteine oxidases control the oxygen-dependent branch of the N-end-rule pathway","volume":"5","author":"Weits","year":"2014","journal-title":"Nat. Commun."},{"key":"ref_39","doi-asserted-by":"crossref","first-page":"1094","DOI":"10.1111\/pce.12493","article-title":"The stability and nuclear localization of the transcription factor RAP2.12 are dynamically regulated by oxygen concentration","volume":"38","author":"Kosmacz","year":"2015","journal-title":"Plant Cell Environ."},{"key":"ref_40","doi-asserted-by":"crossref","first-page":"1616","DOI":"10.1104\/pp.114.253088","article-title":"The Greening after Extended Darkness1 is an N-end rule pathway mutant with high tolerance to submergence and starvation","volume":"167","author":"Riber","year":"2015","journal-title":"Plant Physiol."},{"key":"ref_41","doi-asserted-by":"crossref","unstructured":"Mendiondo, G.M., Gibbs, D.J., Szurman-Zubrzycka, M., Korn, A., Marquez, J., Szarejko, I., Maluszynski, M., King, J., Axcell, B., and Smart, K. (2015). Enhanced waterlogging tolerance in barley by manipulation of expression of the N-end rule pathway E3 ligase PROTEOLYSIS6. Plant Biotechnol. J.","DOI":"10.1111\/pbi.12334"},{"key":"ref_42","doi-asserted-by":"crossref","first-page":"179","DOI":"10.1093\/aob\/mcf118","article-title":"Antioxidants, oxidative damage and oxygen deprivation stress: a review","volume":"91","author":"Blokhina","year":"2003","journal-title":"Ann. Bot."},{"key":"ref_43","doi-asserted-by":"crossref","first-page":"279","DOI":"10.1093\/aob\/mcf205","article-title":"Dynamic aspects of alcoholic fermentation of rice seedlings in response to anaerobiosis and to complete submergence: Relationship to submergence tolerance","volume":"91","author":"Boamfa","year":"2003","journal-title":"Ann. Bot."},{"key":"ref_44","doi-asserted-by":"crossref","first-page":"727","DOI":"10.1093\/aob\/mci224","article-title":"Kinetics of ethanol and acetaldehyde release suggest a role for acetaldehyde production in tolerance of rice seedlings to micro-aerobic conditions","volume":"96","author":"Boamfa","year":"2005","journal-title":"Ann. Bot."},{"key":"ref_45","doi-asserted-by":"crossref","unstructured":"Alpuerto, J.B., Hussain, R.M.F., and Fukao, T. (2015). The key regulator of submergence tolerance, SUB1A, promotes photosynthetic and metabolic recovery from submergence damage in rice leaves. Plant Cell Environ.","DOI":"10.1111\/pce.12661"},{"key":"ref_46","doi-asserted-by":"crossref","unstructured":"Jisha, V., Dampanaboina, L., Vadassery, J., Mithofer, A., Kappara, S., and Ramanan, R. (2015). Overexpression of an AP2\/ERF type transcription factor OsEREBP1 confers biotic and abiotic stress tolerance in rice. PLoS ONE, 10.","DOI":"10.1371\/journal.pone.0127831"},{"key":"ref_47","doi-asserted-by":"crossref","first-page":"2065","DOI":"10.1007\/s00299-015-1852-3","article-title":"The sunflower transcription factor HaWRKY76 confers drought and flood tolerance to Arabidopsis thaliana plants without yield penalty","volume":"34","author":"Raineri","year":"2015","journal-title":"Plant Cell Rep."},{"key":"ref_48","doi-asserted-by":"crossref","first-page":"918","DOI":"10.1111\/j.1469-8137.2007.02318.x","article-title":"Underwater photosynthesis and respiration in leaves of submerged wetland plants: gas films improve CO2 and O2 exchange","volume":"177","author":"Colmer","year":"2008","journal-title":"New Phytol."},{"key":"ref_49","doi-asserted-by":"crossref","first-page":"3225","DOI":"10.1093\/jxb\/eru166","article-title":"Gas film retention and underwater photosynthesis during field submergence of four contrasting rice genotypes","volume":"65","author":"Winkel","year":"2014","journal-title":"J. Exp. Bot."},{"key":"ref_50","doi-asserted-by":"crossref","first-page":"227","DOI":"10.1093\/aob\/mcf242","article-title":"Physiological and molecular basis of susceptibility and tolerance of rice plants to complete submergence","volume":"91","author":"Jackson","year":"2003","journal-title":"Ann. Bot."},{"key":"ref_51","doi-asserted-by":"crossref","first-page":"1795","DOI":"10.1104\/pp.112.207738","article-title":"The submergence tolerance gene SUB1A delays leaf senescence under prolonged darkness through hormonal regulation in rice","volume":"160","author":"Fukao","year":"2012","journal-title":"Plant Physiol."},{"key":"ref_52","doi-asserted-by":"crossref","first-page":"269","DOI":"10.3389\/fpls.2013.00269","article-title":"Tolerance of anaerobic conditions caused by flooding during germination and early growth in rice (Oryza sativa L.)","volume":"4","author":"Miro","year":"2013","journal-title":"Front. Plant Sci."},{"key":"ref_53","doi-asserted-by":"crossref","first-page":"197","DOI":"10.1093\/aob\/mcn211","article-title":"Mechanisms associated with tolerance to flooding during germination and early seedling growth in rice (Oryza sativa)","volume":"103","author":"Ismail","year":"2009","journal-title":"Ann. Bot."},{"key":"ref_54","doi-asserted-by":"crossref","first-page":"2484","DOI":"10.1105\/tpc.105.037887","article-title":"The SnRK1A protein kinase plays a key role in sugar signaling during germination and seedling growth of rice","volume":"19","author":"Lu","year":"2007","journal-title":"Plant Cell"},{"key":"ref_55","doi-asserted-by":"crossref","unstructured":"Lee, K.-W., Chen, P.-W., Lu, C.-A., Chen, S., Ho, T.-H.D., and Yu, S.-M. (2009). Coordinated responses to oxygen and sugar deficiency allow rice seedlings to tolerate flooding. Sci. Signal., 2.","DOI":"10.1126\/scisignal.2000333"},{"key":"ref_56","doi-asserted-by":"crossref","first-page":"20","DOI":"10.1016\/j.tplants.2006.11.005","article-title":"SNF1\/AMPK\/SnRK1 kinases, global regulators at the heart of energy control?","volume":"12","author":"Polge","year":"2007","journal-title":"Trends Plant Sci."},{"key":"ref_57","doi-asserted-by":"crossref","first-page":"159","DOI":"10.1007\/s10681-009-0014-5","article-title":"QTLs associated with tolerance of flooding during germination in rice (Oryza sativa L.)","volume":"172","author":"Angaji","year":"2010","journal-title":"Euphytica"},{"key":"ref_58","doi-asserted-by":"crossref","first-page":"1357","DOI":"10.1007\/s00122-013-2057-1","article-title":"QTL mapping and confirmation for tolerance of anaerobic conditions during germination derived from the rice landrace Ma-Zhan Red","volume":"126","author":"Septiningsih","year":"2013","journal-title":"Theor. Appl. Genet."},{"key":"ref_59","doi-asserted-by":"crossref","first-page":"15124","DOI":"10.1038\/nplants.2015.124","article-title":"A trehalose-6-phosphate phosphatase enhances anaerobic germination tolerance in rice","volume":"1","author":"Kretzschmar","year":"2015","journal-title":"Nat. Plants"},{"key":"ref_60","doi-asserted-by":"crossref","first-page":"1860","DOI":"10.1104\/pp.108.133934","article-title":"Inhibition of SNF1-related protein kinase1 activity and regulation of metabolic pathways by trehalose-6-phosphate","volume":"149","author":"Zhang","year":"2009","journal-title":"Plant Physiol."},{"key":"ref_61","doi-asserted-by":"crossref","first-page":"386","DOI":"10.4161\/psb.5.4.10792","article-title":"Upregulation of biosynthetic processes associated with growth by trehalose 6-phosphate","volume":"5","author":"Paul","year":"2010","journal-title":"Plant Signal. Behav."},{"key":"ref_62","doi-asserted-by":"crossref","first-page":"160","DOI":"10.1104\/pp.111.180422","article-title":"Growth arrest by trehalose-6-phosphate: An astonishing case of primary metabolite control over growth by way of the SnRK1 signaling pathway","volume":"157","author":"Delatte","year":"2011","journal-title":"Plant Physiol."},{"key":"ref_63","doi-asserted-by":"crossref","first-page":"431","DOI":"10.1046\/j.1365-313X.2001.01167.x","article-title":"Expression of antisense SnRK1 protein kinase sequence causes abnormal pollen development and male sterility in transgenic barley","volume":"28","author":"Zhang","year":"2001","journal-title":"Plant J."},{"key":"ref_64","doi-asserted-by":"crossref","first-page":"139","DOI":"10.1046\/j.1365-313X.2003.016015.x","article-title":"Antisense repression of StubGAL83 affects root and tuber development in potato","volume":"33","author":"Lovas","year":"2003","journal-title":"Plant J."},{"key":"ref_65","doi-asserted-by":"crossref","first-page":"227","DOI":"10.1038\/nature04725","article-title":"A trehalose metabolic enzyme controls inflorescence architecture in maize","volume":"441","author":"Nagasawa","year":"2006","journal-title":"Nature"},{"key":"ref_66","doi-asserted-by":"crossref","first-page":"969","DOI":"10.1104\/pp.104.039743","article-title":"Arabidopsis trehalose-6-phosphate synthase 1 is essential for normal vegetative growth and transition to flowering","volume":"135","author":"Schluepmann","year":"2004","journal-title":"Plant Physiol."},{"key":"ref_67","doi-asserted-by":"crossref","first-page":"938","DOI":"10.1038\/nature06069","article-title":"A central integrator of transcription networks in plant stress and energy signalling","volume":"448","author":"Rolland","year":"2007","journal-title":"Nature"},{"key":"ref_68","doi-asserted-by":"crossref","first-page":"809","DOI":"10.1111\/j.1365-313X.2011.04832.x","article-title":"AKIN10 and FUSCA3 interact to control lateral organ development and phase transitions in Arabidopsis","volume":"69","author":"Tsai","year":"2012","journal-title":"Plant J."},{"key":"ref_69","doi-asserted-by":"crossref","first-page":"704","DOI":"10.1126\/science.1230406","article-title":"Regulation of flowering by trehalose-6-phosphate signaling in Arabidopsis thaliana","volume":"339","author":"Wahl","year":"2013","journal-title":"Science"},{"key":"ref_70","doi-asserted-by":"crossref","first-page":"682","DOI":"10.1111\/j.1399-3054.2008.01075.x","article-title":"The effect of potassium nutrition on pest and disease resistance in plants","volume":"133","author":"Amtmann","year":"2008","journal-title":"Physiol. Plant."},{"key":"ref_71","doi-asserted-by":"crossref","first-page":"443","DOI":"10.1146\/annurev-arplant-042809-112116","article-title":"Genetic engineering for modern agriculture: Challenges and perspectives","volume":"61","author":"Mittler","year":"2010","journal-title":"Annu. Rev. Plant Biol."},{"key":"ref_72","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1016\/j.pmpp.2004.11.002","article-title":"Abscisic acid and low temperatures suppress the whole plant-specific resistance reaction of rice plants to the infection of Magnaporthe grisea","volume":"65","author":"Koga","year":"2004","journal-title":"Physiol. Mol. Plant Pathol."},{"key":"ref_73","doi-asserted-by":"crossref","first-page":"461","DOI":"10.1071\/FP02231","article-title":"Abscisic acid influences the susceptibility of Arabidopsis thaliana to Pseudomonas syringae pv. tomato and Peronospora. parasitica","volume":"30","author":"Mohr","year":"2003","journal-title":"Funct. Plant Biol."},{"key":"ref_74","doi-asserted-by":"crossref","first-page":"325","DOI":"10.1016\/S1369-5266(02)00275-3","article-title":"Cross talk between signaling pathways in pathogen defense","volume":"5","author":"Kunkel","year":"2002","journal-title":"Curr. Opin. Plant Biol."},{"key":"ref_75","doi-asserted-by":"crossref","first-page":"317","DOI":"10.1146\/annurev-phyto-073009-114447","article-title":"Hormone crosstalk in plant disease and defense: More than just jasmonate-salicylate antagonism","volume":"49","author":"Grant","year":"2011","journal-title":"Annu. Rev. Phytopathol."},{"key":"ref_76","doi-asserted-by":"crossref","first-page":"491","DOI":"10.1104\/pp.010605","article-title":"Abscisic acid determines basal susceptibility of tomato to Botrytis cinerea and suppresses salicylic acid-dependent signaling mechanisms","volume":"128","author":"Audenaert","year":"2002","journal-title":"Plant Physiol."},{"key":"ref_77","doi-asserted-by":"crossref","first-page":"3460","DOI":"10.1105\/tpc.104.025833","article-title":"Antagonistic interaction between abscisic acid and jasmonate-ethylene signaling pathways modulates defense gene expression and disease resistance in Arabidopsis","volume":"16","author":"Anderson","year":"2004","journal-title":"Plant Cell"},{"key":"ref_78","doi-asserted-by":"crossref","first-page":"409","DOI":"10.1016\/j.pbi.2005.05.015","article-title":"The role of abscisic acid in plant-pathogen interactions","volume":"8","author":"Mauch","year":"2005","journal-title":"Curr. Opin. Plant Biol."},{"key":"ref_79","doi-asserted-by":"crossref","first-page":"436","DOI":"10.1016\/j.pbi.2006.05.014","article-title":"Crosstalk between abiotic and biotic stress responses: A current view from the points of convergence in the stress signaling networks","volume":"9","author":"Fujita","year":"2006","journal-title":"Curr. Opin. Plant Biol."},{"key":"ref_80","doi-asserted-by":"crossref","first-page":"1678","DOI":"10.1105\/tpc.107.054296","article-title":"Antagonistic interaction between systemic acquired resistance and the abscisic acid-mediated abiotic stress response in Arabidopsis","volume":"20","author":"Yasuda","year":"2008","journal-title":"Plant Cell"},{"key":"ref_81","doi-asserted-by":"crossref","first-page":"1938","DOI":"10.1105\/tpc.022319","article-title":"JASMONATE-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis","volume":"16","author":"Lorenzo","year":"2004","journal-title":"Plant Cell"},{"key":"ref_82","doi-asserted-by":"crossref","unstructured":"Khong, G.N., Pati, P.K., Richaud, F., Parizot, B., Bidzinski, P., Mai, C.D., Bes, M., Bourrie, I., Meynard, D., and Beeckman, T. (2015). OsMADS26 negatively regulates resistance to pathogens and drought tolerance in rice. Plant Physiol.","DOI":"10.1104\/pp.15.01192"},{"key":"ref_83","doi-asserted-by":"crossref","first-page":"717","DOI":"10.3389\/fpls.2015.00717","article-title":"Co-silencing of tomato S-adenosylhomocysteine hydrolase genes confers increased immunity against Pseudomonas syringae pv. tomato DC3000 and enhanced tolerance to drought stress","volume":"6","author":"Li","year":"2015","journal-title":"Front. Plant Sci."},{"key":"ref_84","doi-asserted-by":"crossref","first-page":"1381","DOI":"10.1104\/pp.110.4.1381","article-title":"Race-specific elicitors of Cladosporium. fulvum induce changes in cell morphology and the synthesis of ethylene and salicylic acid in tomato plants carrying the corresponding Cf. disease resistance gene","volume":"110","author":"Silverman","year":"1996","journal-title":"Plant Physiol."},{"key":"ref_85","doi-asserted-by":"crossref","first-page":"947","DOI":"10.1007\/s00425-005-0036-8","article-title":"High humidity represses Cf-4\/Avr4- and Cf-9\/Avr9-dependent hypersensitive cell death and defense gene expression","volume":"222","author":"Wang","year":"2005","journal-title":"Planta"},{"key":"ref_86","doi-asserted-by":"crossref","first-page":"2225","DOI":"10.1105\/tpc.010226","article-title":"A humidity-sensitive Arabidopsis copine mutant exhibits precocious cell death and increased disease resistance","volume":"13","author":"Jambunathan","year":"2001","journal-title":"Plant Cell"},{"key":"ref_87","doi-asserted-by":"crossref","first-page":"447","DOI":"10.1046\/j.1365-313X.2001.2641039.x","article-title":"Environmentally sensitive, SA-dependent defense responses in the cpr22 mutant of Arabidopsis","volume":"26","author":"Yoshioka","year":"2001","journal-title":"Plant J."},{"key":"ref_88","doi-asserted-by":"crossref","first-page":"920","DOI":"10.1111\/j.1365-313X.2004.02180.x","article-title":"High humidity suppresses ssi4-mediated cell death and disease resistance upstream of MAP kinase activation, H2O2 production and defense gene expression","volume":"39","author":"Zhou","year":"2004","journal-title":"Plant J."},{"key":"ref_89","doi-asserted-by":"crossref","first-page":"2699","DOI":"10.1105\/tpc.113.114447","article-title":"Submergence confers immunity mediated by the WRKY22 transcription factor in Arabidopsis","volume":"25","author":"Hsu","year":"2013","journal-title":"Plant Cell"},{"key":"ref_90","doi-asserted-by":"crossref","first-page":"450","DOI":"10.1111\/j.1469-8137.2012.04160.x","article-title":"Arabidopsis RAP2.2 plays an important role in plant resistance to Botrytis cinerea and ethylene responses","volume":"195","author":"Zhao","year":"2012","journal-title":"New Phytol."},{"key":"ref_91","doi-asserted-by":"crossref","first-page":"964","DOI":"10.1111\/j.1469-8137.2008.02483.x","article-title":"Flooding tolerance in halophytes","volume":"179","author":"Colmer","year":"2008","journal-title":"New Phytol."},{"key":"ref_92","doi-asserted-by":"crossref","first-page":"2348","DOI":"10.1016\/j.febslet.2007.03.035","article-title":"Potassium transporters in plants\u2014involvement in K+ acquisition, redistribution and homeostasis","volume":"581","author":"Gierth","year":"2007","journal-title":"FEBS Lett."},{"key":"ref_93","doi-asserted-by":"crossref","first-page":"612","DOI":"10.1111\/j.1365-3040.2009.02086.x","article-title":"Na+ transport in glycophytic plants: What we know and would like to know","volume":"33","author":"Plett","year":"2010","journal-title":"Plant Cell Environ."},{"key":"ref_94","doi-asserted-by":"crossref","first-page":"566","DOI":"10.1111\/j.1365-3040.2009.02060.x","article-title":"Mechanisms of Cl\u2212 transport contributing to salt tolerance","volume":"33","author":"Teakle","year":"2010","journal-title":"Plant Cell Environ."},{"key":"ref_95","doi-asserted-by":"crossref","first-page":"872","DOI":"10.1071\/FP12235","article-title":"The waterlogging\/salinity interaction in higher plants revisited\u2014focusing on the hypoxia-induced disturbance to K+ homeostasis","volume":"40","author":"Shabala","year":"2013","journal-title":"Funct. Plant Biol."},{"key":"ref_96","doi-asserted-by":"crossref","first-page":"1114","DOI":"10.1111\/nph.13535","article-title":"Oxygen deficiency and salinity affect cell-specific ion concentrations in adventitious roots of barley (Hordeum vulgare)","volume":"208","author":"Kotula","year":"2015","journal-title":"New Phytol."},{"key":"ref_97","doi-asserted-by":"crossref","first-page":"2339","DOI":"10.1111\/pce.12269","article-title":"Leaf gas films delay salt entry and enhance underwater photosynthesis and internal aeration of Melilotus siculus submerged in saline water","volume":"37","author":"Teakle","year":"2014","journal-title":"Plant Cell Environ."},{"key":"ref_98","doi-asserted-by":"crossref","first-page":"2303","DOI":"10.1111\/pce.12375","article-title":"Inverse modulation of the energy sensor Snf1-related protein kinase 1 on hypoxia adaptation and salt stress tolerance in Arabidopsis thaliana","volume":"37","author":"Im","year":"2014","journal-title":"Plant Cell Environ."},{"key":"ref_99","doi-asserted-by":"crossref","first-page":"1955","DOI":"10.1104\/pp.111.189829","article-title":"Regulatory functions of SnRK1 in stress-responsive gene expression and in plant growth and development","volume":"158","author":"Cho","year":"2012","journal-title":"Plant Physiol."},{"key":"ref_100","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1093\/aob\/mcn172","article-title":"Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice","volume":"103","author":"Fukao","year":"2009","journal-title":"Ann. Bot."},{"key":"ref_101","doi-asserted-by":"crossref","first-page":"221","DOI":"10.1093\/aob\/mcn137","article-title":"Review of wheat improvement for waterlogging tolerance in Australia and India: The importance of anaerobiosis and element toxicities associated with different soils","volume":"103","author":"Setter","year":"2009","journal-title":"Ann. Bot."},{"key":"ref_102","doi-asserted-by":"crossref","first-page":"196","DOI":"10.3390\/biology1020196","article-title":"Soil oxidation-reduction in wetlands and its impact on plant functioning","volume":"1","author":"Pezeshki","year":"2012","journal-title":"Biology"},{"key":"ref_103","doi-asserted-by":"crossref","first-page":"88","DOI":"10.1104\/pp.108.129791","article-title":"Transcriptional regulatory networks in response to abiotic stresses in Arabidopsis and grasses","volume":"149","author":"Nakashima","year":"2009","journal-title":"Plant Physiol."},{"key":"ref_104","doi-asserted-by":"crossref","first-page":"176","DOI":"10.1016\/j.tplants.2010.01.006","article-title":"Multiple stress factors and the emission of plant VOCs","volume":"15","author":"Holopainen","year":"2010","journal-title":"Trends Plant Sci."},{"key":"ref_105","doi-asserted-by":"crossref","first-page":"695","DOI":"10.1016\/j.tplants.2013.08.011","article-title":"Catabolism of volatile organic compounds influences plant survival","volume":"18","author":"Oikawa","year":"2013","journal-title":"Trends Plant Sci."}],"container-title":["International Journal of Molecular Sciences"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.mdpi.com\/1422-0067\/16\/12\/26226\/pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,11]],"date-time":"2025-10-11T20:54:18Z","timestamp":1760216058000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.mdpi.com\/1422-0067\/16\/12\/26226"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,12,17]]},"references-count":105,"journal-issue":{"issue":"12","published-online":{"date-parts":[[2015,12]]}},"alternative-id":["ijms161226226"],"URL":"https:\/\/doi.org\/10.3390\/ijms161226226","relation":{},"ISSN":["1422-0067"],"issn-type":[{"value":"1422-0067","type":"electronic"}],"subject":[],"published":{"date-parts":[[2015,12,17]]}}}