{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,16]],"date-time":"2026-09-16T17:43:05Z","timestamp":1789580585432,"version":"build-2803163510"},"reference-count":159,"publisher":"MDPI AG","issue":"16","license":[{"start":{"date-parts":[[2024,8,9]],"date-time":"2024-08-09T00:00:00Z","timestamp":1723161600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"Winkler Bacterial Overgrowth Research Fund","award":["BRINM 217"],"award-info":[{"award-number":["BRINM 217"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IJMS"],"abstract":"<jats:p>As knowledge of the gut microbiome has expanded our understanding of the symbiotic and dysbiotic relationships between the human host and its microbial constituents, the influence of gastrointestinal (GI) microbes both locally and beyond the intestine has become evident. Shifts in bacterial populations have now been associated with several conditions including Crohn\u2019s disease (CD), Ulcerative Colitis (UC), irritable bowel syndrome (IBS), Alzheimer\u2019s disease, Parkinson\u2019s Disease, liver diseases, obesity, metabolic syndrome, anxiety, depression, and cancers. As the bacteria in our gut thrive on the food we eat, diet plays a critical role in the functional aspects of our gut microbiome, influencing not only health but also the development of disease. While the bacterial microbiome in the context of disease is well studied, the associated gut phageome\u2014bacteriophages living amongst and within our bacterial microbiome\u2014is less well understood. With growing evidence that fluctuations in the phageome also correlate with dysbiosis, how diet influences this population needs to be better understood. This review surveys the current understanding of the effects of diet on the gut phageome.<\/jats:p>","DOI":"10.3390\/ijms25168690","type":"journal-article","created":{"date-parts":[[2024,8,9]],"date-time":"2024-08-09T09:48:54Z","timestamp":1723196934000},"page":"8690","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":19,"title":["Dietary Effects on the Gut Phageome"],"prefix":"10.3390","volume":"25","author":[{"given":"Andrea","family":"Howard","sequence":"first","affiliation":[{"name":"School of Medicine, University of New Mexico, Albuquerque, NM 87131, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9089-2601","authenticated-orcid":false,"given":"Amanda","family":"Carroll-Portillo","sequence":"additional","affiliation":[{"name":"Division of Gastroenterology and Hepatology, University of New Mexico, Albuquerque, NM 87131, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0807-164X","authenticated-orcid":false,"given":"Joe","family":"Alcock","sequence":"additional","affiliation":[{"name":"Department of Emergency Medicine, University of New Mexico, Albuquerque, NM 87131, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Henry C.","family":"Lin","sequence":"additional","affiliation":[{"name":"Division of Gastroenterology and Hepatology, University of New Mexico, Albuquerque, NM 87131, USA"},{"name":"Medicine Service, New Mexico VA Health Care System, Albuquerque, NM 87108, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1968","published-online":{"date-parts":[[2024,8,9]]},"reference":[{"key":"ref_1","first-page":"100050","article-title":"The bacteriophage decides own tracks: When they are with or against the bacteria","volume":"2","author":"Makky","year":"2021","journal-title":"Curr. 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