{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,20]],"date-time":"2026-01-20T01:58:30Z","timestamp":1768874310843,"version":"3.49.0"},"reference-count":44,"publisher":"MDPI AG","issue":"4","license":[{"start":{"date-parts":[[2025,3,24]],"date-time":"2025-03-24T00:00:00Z","timestamp":1742774400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100003593","name":"grants Fapergs","doi-asserted-by":"publisher","award":["23\/2551-0002221-4"],"award-info":[{"award-number":["23\/2551-0002221-4"]}],"id":[{"id":"10.13039\/501100003593","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003593","name":"grants Fapergs","doi-asserted-by":"publisher","award":["405786\/2022-0"],"award-info":[{"award-number":["405786\/2022-0"]}],"id":[{"id":"10.13039\/501100003593","id-type":"DOI","asserted-by":"publisher"}]},{"name":"CAPES","award":["23\/2551-0002221-4"],"award-info":[{"award-number":["23\/2551-0002221-4"]}]},{"name":"CAPES","award":["405786\/2022-0"],"award-info":[{"award-number":["405786\/2022-0"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Pathogens"],"abstract":"<jats:p>The surveillance of wildlife viromes is essential for identifying zoonotic threats within the One Health framework. This study analyzed rectal and oral swabs from 88 individuals representing 13 species as felids, wild rodents, marsupials and non-human primates in Southern Brazil using metagenomic sequencing. Akodon montensis (n = 15 individuals) and Coendou spinosus (n = 4) harbored Chikungunya virus (ChikV, Togaviridae), marking its first detection in these hosts. Molossus molossus (n = 17) presented Coronaviridae and Orthoherpesviridae, while Eptesicus furinalis (n = 1) also carried Coronaviridae. A broad virome diversity, including Togaviridae and Adenoviridae members, was identified in Didelphis albiventris (n = 43), with significant relevance to human health. Additional species, such as Callithrix jacchus (n = 1), Leopardus guttulus (n = 1), Myocastor coypus (n = 1), Monodelphis iheringi (n = 1), Thaptomys nigrita (n = 1), Sooretamys angouya (n = 1), Brucepattersonius iheringi (n = 1), and Lasiurus blossevillii (n = 1), contributed to insights into viral reservoirs. These results underscore the importance of virome studies in regions harboring high biodiversity, emphasizing genomic surveillance as a vital tool for monitoring zoonotic viruses and safeguarding global health.<\/jats:p>","DOI":"10.3390\/pathogens14040310","type":"journal-article","created":{"date-parts":[[2025,3,24]],"date-time":"2025-03-24T12:01:50Z","timestamp":1742817710000},"page":"310","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["Virome of Terrestrial Mammals and Bats from Southern Brazil: Circulation of New Putative Members of the Togaviridae Family and Other Findings"],"prefix":"10.3390","volume":"14","author":[{"ORCID":"https:\/\/orcid.org\/0009-0002-1208-6764","authenticated-orcid":false,"given":"Julyana Sth\u00e9fanie Sim\u00f5es","family":"Matos","sequence":"first","affiliation":[{"name":"Environmental Quality Graduate Program, Molecular Microbiology Laboratory, Feevale University, Novo Hamburgo 93525-075, Brazil"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Meriane","family":"Demoliner","sequence":"additional","affiliation":[{"name":"Virology Master Program, Molecular Microbiology Laboratory, Feevale University, Novo Hamburgo 93525-075, Brazil"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Juliana Schons","family":"Gularte","sequence":"additional","affiliation":[{"name":"Immunology and Molecular Biology Laboratory, Faculty of Veterinary Medicine, Federal University of Rio Grande do Sul, Porto Alegre 91540-000, Brazil"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Micheli","family":"Filippi","sequence":"additional","affiliation":[{"name":"Virology Master Program, Molecular Microbiology Laboratory, Feevale University, Novo Hamburgo 93525-075, Brazil"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Vyctoria Malayhka","family":"de Abreu G\u00f3es Pereira","sequence":"additional","affiliation":[{"name":"Environmental Quality Graduate Program, Molecular Microbiology Laboratory, Feevale University, Novo Hamburgo 93525-075, Brazil"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1830-9017","authenticated-orcid":false,"given":"Mariana Soares","family":"da Silva","sequence":"additional","affiliation":[{"name":"Virology Master Program, Faculty of Veterinary Medicine, Feevale University, Novo Hamburgo 93525-075, Brazil"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8282-6778","authenticated-orcid":false,"given":"Matheus Nunes","family":"Weber","sequence":"additional","affiliation":[{"name":"Immunology and Molecular Biology Laboratory, Faculty of Veterinary Medicine, Federal University of Rio Grande do Sul, Porto Alegre 91540-000, Brazil"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4484-5892","authenticated-orcid":false,"given":"Marcelo Pereira","family":"de Barros","sequence":"additional","affiliation":[{"name":"Environmental Quality Graduate Program, Zoology Laboratory, Faculty of Veterinary Medicine, Feevale University, Novo Hamburgo 93525-075, Brazil"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5804-7045","authenticated-orcid":false,"given":"Fernando Rosado","family":"Spilki","sequence":"additional","affiliation":[{"name":"Environmental Quality Graduate Program and Virology Graduate Program, Faculty of Veterinary Medicine, Feevale University, Novo Hamburgo 93525-075, Brazil"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"1968","published-online":{"date-parts":[[2025,3,24]]},"reference":[{"key":"ref_1","doi-asserted-by":"crossref","first-page":"D764","DOI":"10.1093\/nar\/gkaa946","article-title":"IMG\/VR v3: An integrated ecological and evolutionary framework for interrogating genomes of uncultivated viruses","volume":"49","author":"Roux","year":"2021","journal-title":"Nucleic Acids Res."},{"key":"ref_2","doi-asserted-by":"crossref","first-page":"e51971","DOI":"10.7554\/eLife.51971","article-title":"Discovery of several thousand highly diverse circular DNA viruses","volume":"9","author":"Tisza","year":"2020","journal-title":"eLife"},{"key":"ref_3","first-page":"133","article-title":"Integrating Viral Metagenomics into an Ecological Framework","volume":"8","author":"Sommers","year":"2021","journal-title":"Annu. 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