{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,18]],"date-time":"2026-08-18T14:14:13Z","timestamp":1787062453875,"version":"build-2736575974"},"reference-count":66,"publisher":"MDPI AG","issue":"11","license":[{"start":{"date-parts":[[2021,11,5]],"date-time":"2021-11-05T00:00:00Z","timestamp":1636070400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"The Key R &amp; D projects in Zhejiang Province","award":["2019C02038, 678 2020C02001, 2021C02009"],"award-info":[{"award-number":["2019C02038, 678 2020C02001, 2021C02009"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Plants"],"abstract":"<jats:p>Decline disease causes severe damage to bayberry. However, the cause of this disease remains unclear. Interestingly, our previous studies found that the disease severity is related with the level of soil fertilizer. This study aims to explore the effect and mechanism of compound fertilizer (CF) and bio-organic fertilizer (OF) in this disease by investigating the vegetative growth, fruit characters, soil property, rhizosphere microflora and metabolites. Results indicated that compared with the disease control, CF and OF exhibited differential effect in plant healthy and soil quality, together with the increase in relative abundance of Burkholderia and Mortierella, and the reduction in that of Rhizomicrobium and Acidibacter, Trichoderma, and Cladophialophora reduced. The relative abundance of Geminibasidium were increased by CF (251.79%) but reduced by OF (13.99%). In general, the composition of bacterial and fungal communities in rhizosphere soil was affected significantly at genus level by exchangeable calcium, available phosphorus, and exchangeable magnesium, while the former two variables had a greater influence in bacterial communities than fungal communities. Analysis of GC-MS metabonomics indicated that compared to the disease control, CF and OF significantly changed the contents of 31 and 45 metabolites, respectively, while both fertilizers changed C5-branched dibasic acid, galactose, and pyrimidine metabolic pathway. Furthermore, a significant correlation was observed at the phylum, order and genus levels between microbial groups and secondary metabolites of bayberry rhizosphere soil. In summary, the results provide a new way for rejuvenation of this diseased bayberry trees.<\/jats:p>","DOI":"10.3390\/plants10112386","type":"journal-article","created":{"date-parts":[[2021,11,7]],"date-time":"2021-11-07T20:42:54Z","timestamp":1636317774000},"page":"2386","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":28,"title":["Effect of Two Kinds of Fertilizers on Growth and Rhizosphere Soil Properties of Bayberry with Decline Disease"],"prefix":"10.3390","volume":"10","author":[{"given":"Haiying","family":"Ren","sequence":"first","affiliation":[{"name":"Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hongyan","family":"Wang","sequence":"additional","affiliation":[{"name":"Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zheping","family":"Yu","sequence":"additional","affiliation":[{"name":"Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shuwen","family":"Zhang","sequence":"additional","affiliation":[{"name":"Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xingjiang","family":"Qi","sequence":"additional","affiliation":[{"name":"Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Li","family":"Sun","sequence":"additional","affiliation":[{"name":"Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zhenshuo","family":"Wang","sequence":"additional","affiliation":[{"name":"College of Plant Protection, China Agricultural University, Beijing 100193, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Muchen","family":"Zhang","sequence":"additional","affiliation":[{"name":"Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Temoor","family":"Ahmed","sequence":"additional","affiliation":[{"name":"Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4581-4775","authenticated-orcid":false,"given":"Bin","family":"Li","sequence":"additional","affiliation":[{"name":"Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1968","published-online":{"date-parts":[[2021,11,5]]},"reference":[{"key":"ref_1","doi-asserted-by":"crossref","unstructured":"Ren, H.Y., Yu, H.Y., Zhang, S.W., Liang, S.M., Zheng, X.L., Zhang, S.J., Yao, P., Zheng, H.K., and Qi, X.J. (2019). Genome sequencing provides insights into the evolution and antioxidant activity of Chinese bayberry. BMC Genom., 20.","DOI":"10.1186\/s12864-019-5818-7"},{"key":"ref_2","doi-asserted-by":"crossref","first-page":"97","DOI":"10.1007\/s11130-013-0349-x","article-title":"Biological activities of extracts from Chinese bayberry (Myrica rubra Sieb. et Zucc.): A review","volume":"68","author":"Sun","year":"2013","journal-title":"Plant Foods Hum. Nutr."},{"key":"ref_3","doi-asserted-by":"crossref","unstructured":"Ren, H.Y., Wang, H.Y., Qi, X.J., Yu, Z.P., Zheng, X.L., Zhang, S.W., Wang, Z.S., Zhang, M.C., Ahmed, T., and Li, B. (2021). The damage caused by decline disease in bayberry plants through changes in soil properties, rhizosphere microbial community structure and metabolites. Plants, 10.","DOI":"10.3390\/plants10102083"},{"key":"ref_4","first-page":"93","article-title":"The symptoms and nutritional status of decline diseased bayberry","volume":"61","author":"Ren","year":"2020","journal-title":"Zhejiang Agric. Sci."},{"key":"ref_5","doi-asserted-by":"crossref","first-page":"861","DOI":"10.2134\/jeq2012.0451","article-title":"Implications of inorganic fertilizer application of irrigated corn on soil properties: Lessons learned after 50 years","volume":"42","author":"Schlegel","year":"2013","journal-title":"J. Environ. Qual."},{"key":"ref_6","doi-asserted-by":"crossref","unstructured":"Shang, L.R., Wan, L.Q., Zhou, X.X., Li, S., and Li, X.L. (2020). Effects of organic fertilizer on soil nutrient status, enzyme activity, and bacterial community diversity in Leymus chinensis steppe in Inner Mongolia, China. PLoS ONE, 15.","DOI":"10.1371\/journal.pone.0240559"},{"key":"ref_7","doi-asserted-by":"crossref","first-page":"122823","DOI":"10.1016\/j.biortech.2020.122823","article-title":"Biological nutrient removal and recovery from solid and liquid livestock manure: Recent advance and perspective","volume":"301","author":"Zubair","year":"2020","journal-title":"Bioresour. Technol."},{"key":"ref_8","doi-asserted-by":"crossref","first-page":"404","DOI":"10.1007\/s00248-016-0849-y","article-title":"Application of bioorganic fertilizer significantly increased apple yields and shaped bacterial community structure in orchard soil","volume":"73","author":"Wang","year":"2017","journal-title":"Microb. Ecol."},{"key":"ref_9","doi-asserted-by":"crossref","first-page":"264","DOI":"10.1016\/j.soilbio.2014.04.023","article-title":"Change in deep soil microbial communities due to long-term fertilization","volume":"75","author":"Li","year":"2014","journal-title":"Soil Biol. Biochem."},{"key":"ref_10","doi-asserted-by":"crossref","first-page":"190","DOI":"10.1002\/jobm.201200671","article-title":"Manure fertilization alters the population of ammonia-oxidizing bacteria rather than ammonia-oxidizing archaea in a paddy soil","volume":"54","author":"Yu","year":"2014","journal-title":"J. Basic Microbiol."},{"key":"ref_11","doi-asserted-by":"crossref","first-page":"136439","DOI":"10.1016\/j.scitotenv.2019.136439","article-title":"Optimization of reduced chemical fertilizer use in tea gardens based on the assessment of related environmental and economic benefits","volume":"713","author":"Wang","year":"2020","journal-title":"Sci. Total Environ."},{"key":"ref_12","doi-asserted-by":"crossref","first-page":"9568","DOI":"10.1038\/s41598-020-66648-9","article-title":"Increased organic fertilizer application and reduced chemical fertilizer application affect the soil properties and bacterial communities of grape rhizosphere soil","volume":"10","author":"Wu","year":"2020","journal-title":"Sci. Rep."},{"key":"ref_13","doi-asserted-by":"crossref","first-page":"765","DOI":"10.1007\/s00374-014-0898-7","article-title":"Bio-organic fertilizer application significantly reduces the Fusarium oxysporum population and alters the composition of fungi communities of watermelon Fusarium wilt rhizosphere soil","volume":"50","author":"Zhao","year":"2014","journal-title":"Biol. Fert. Soils"},{"key":"ref_14","doi-asserted-by":"crossref","unstructured":"Zhang, H., Hua, Z.W., Liang, W.Z., Niu, Q.H., and Wang, X. (2020). The prevention of bio-organic fertilizer fermented from cow manure compost by Bacillus sp. XG-1 on watermelon continuous cropping barrier. Int. J. Environ. Res. Public Health, 17.","DOI":"10.3390\/ijerph17165714"},{"key":"ref_15","doi-asserted-by":"crossref","unstructured":"Huang, N., Wang, W., Yao, Y., Zhu, F., Wang, W., and Chang, X. (2017). The influence of different concentrations of bio-organic fertilizer on cucumber Fusarium wilt and soil microflora alterations. PLoS ONE, 12.","DOI":"10.1371\/journal.pone.0171490"},{"key":"ref_16","doi-asserted-by":"crossref","first-page":"137","DOI":"10.1186\/s40168-020-00892-z","article-title":"Bio-organic fertilizers stimulate indigenous soil Pseudomonas populations to enhance plant disease suppression","volume":"8","author":"Tao","year":"2020","journal-title":"Microbiome"},{"key":"ref_17","doi-asserted-by":"crossref","first-page":"621","DOI":"10.1002\/jobm.201800736","article-title":"Utilization of carbon sources in the rice rhizosphere and nonrhizosphere soils with different long-term fertilization management","volume":"59","author":"Tang","year":"2019","journal-title":"J. Basic Microbiol."},{"key":"ref_18","doi-asserted-by":"crossref","first-page":"1205","DOI":"10.3390\/ijms17081205","article-title":"Effects of secondary plant metabolites on microbial populations: Changes in community structure and metabolic activity in contaminated environments","volume":"17","author":"Lucie","year":"2016","journal-title":"Int. J. Mol. Sci."},{"key":"ref_19","doi-asserted-by":"crossref","first-page":"103","DOI":"10.1007\/s10646-018-2004-7","article-title":"Allelopathic effects of Canada goldenrod leaf extracts on the seed germination and seedling growth of lettuce reinforced under salt stress","volume":"28","author":"Wang","year":"2019","journal-title":"Ecotoxicology"},{"key":"ref_20","doi-asserted-by":"crossref","unstructured":"Zhou, X.A., and Wu, F.Z. (2012). P-Coumaric acid influenced cucumber rhizosphere soil microbial communities and the growth of Fusarium oxysporum f.sp. cucumerinum Owen. PLoS ONE, 7.","DOI":"10.1371\/journal.pone.0048288"},{"key":"ref_21","doi-asserted-by":"crossref","first-page":"9","DOI":"10.1016\/j.jhazmat.2015.01.071","article-title":"Effect of di-n-butyl phthalate on root physiology and rhizosphere microbial community of cucumber seedings","volume":"289","author":"Zhang","year":"2015","journal-title":"J. Hazard. Mater."},{"key":"ref_22","doi-asserted-by":"crossref","first-page":"1716","DOI":"10.1039\/C9EN00137A","article-title":"Metabolomics reveals that engineered nanomaterial exposure in soil alters both soil rhizosphere metabolite profiles and maize metabolic pathways","volume":"6","author":"Zhao","year":"2019","journal-title":"Environ. Sci. Nano"},{"key":"ref_23","doi-asserted-by":"crossref","first-page":"13137","DOI":"10.1021\/acs.est.0c03767","article-title":"Foliar application of SiO2 nanoparticles alters soil metabolite profiles and microbial community composition in the pakchoi (Brassica chinensis L.) rhizosphere grown in contaminated mine soil","volume":"54","author":"Tian","year":"2020","journal-title":"Environ. Sci. Technol."},{"key":"ref_24","doi-asserted-by":"crossref","unstructured":"Ghimire, B.K., Ghimire, B., Yu, C.Y., and Chung, I.M. (2019). Allelopathic and autotoxic effects of medicago sativa-derived allelochemicals. Plants, 8.","DOI":"10.3390\/plants8070233"},{"key":"ref_25","doi-asserted-by":"crossref","unstructured":"Pan, L., Lei, D.Y., Jin, L., He, Y., and Yang, Q.Q. (2018). Promising fungicides from allelochemicals: Synthesis of umbelliferone derivatives and their structure-activity relationships. Molecules, 23.","DOI":"10.3390\/molecules23113002"},{"key":"ref_26","doi-asserted-by":"crossref","first-page":"27445","DOI":"10.1073\/pnas.2012088117","article-title":"Diatom modulation of select bacteria through use of two unique secondary metabolites","volume":"117","author":"Shibl","year":"2020","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"ref_27","doi-asserted-by":"crossref","unstructured":"Neal, A.L., Ahmad, S., Gordon-Weeks, R., and Ton, J. (2012). Benzoxazinoids in root exudates of maize attract Pseudomonas putida to the rhizosphere. PLoS ONE, 7.","DOI":"10.1371\/journal.pone.0035498"},{"key":"ref_28","doi-asserted-by":"crossref","first-page":"564","DOI":"10.1016\/j.lwt.2014.04.015","article-title":"Total phenolics, carotenoids and antioxidant properties of tommy atkin mango cubes as affected by drying techniques","volume":"62","author":"Sogi","year":"2015","journal-title":"LWT Food Sci. Technol."},{"key":"ref_29","doi-asserted-by":"crossref","first-page":"460","DOI":"10.1016\/j.foodchem.2014.11.083","article-title":"Chemical properties in fruits of mulberry species from the Xinjiang province of China","volume":"174","author":"Jiang","year":"2015","journal-title":"Food Chem."},{"key":"ref_30","doi-asserted-by":"crossref","unstructured":"Qu, B.P., Liu, Y.X., Sun, X.Y., Li, S.Y., Wang, S.Y., Xiong, K.Y., Yun, B.H., and Zhang, H. (2019). Effect of various mulches on soil physico-chemical properties and tree growth (Sophora japonica) in urban tree pits. PLoS ONE, 14.","DOI":"10.1371\/journal.pone.0210777"},{"key":"ref_31","doi-asserted-by":"crossref","first-page":"20","DOI":"10.1186\/s13568-018-0549-8","article-title":"Effect of long-term fertilization strategies on bacterial community composition in a 35-year field experiment of Chinese mollisols","volume":"8","author":"Ma","year":"2018","journal-title":"AMB Express"},{"key":"ref_32","doi-asserted-by":"crossref","first-page":"2893","DOI":"10.1007\/s10653-019-00359-7","article-title":"The influence of the quantity and quality of sediment organic matter on the potential mobility and toxicity of trace elements in bottom sediment","volume":"41","author":"Baran","year":"2019","journal-title":"Environ. Geochem. Health"},{"key":"ref_33","doi-asserted-by":"crossref","unstructured":"Wu, L.Y., Wen, C.Q., Qin, Y.J., Yin, H.Q., Tu, Q.C., Nostrand, J.D.V., Yuan, T., Yuan, M.T., Deng, Y., and Zhou, J.Z. (2015). Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis. BMC Microbiol., 15.","DOI":"10.1186\/s12866-015-0450-4"},{"key":"ref_34","doi-asserted-by":"crossref","unstructured":"Mukherjee, P.K., Chandra, J., Retuerto, M., Sikaroodi, M., Brown, R.E., Jurevic, R., Salata, R.A., Lederman, M.M., Gillevet, P.M., and Ghannoum, M.A. (2014). Oral mycobiome analysis of HIV-infected patients: Identification of pichia as an antagonist of opportunistic fungi. PLoS Pathog., 10.","DOI":"10.1371\/journal.ppat.1003996"},{"key":"ref_35","doi-asserted-by":"crossref","first-page":"2114","DOI":"10.1093\/bioinformatics\/btu170","article-title":"Trimmomatic: A flexible trimmer for Illumina Caporaso sequence data","volume":"30","author":"Bolger","year":"2014","journal-title":"Bioinformatics"},{"key":"ref_36","doi-asserted-by":"crossref","first-page":"460","DOI":"10.1038\/nbt.2170","article-title":"FLASH assembly of TALENs for high-throughput genome editing","volume":"30","author":"Reyon","year":"2012","journal-title":"Nat. Biotech."},{"key":"ref_37","doi-asserted-by":"crossref","first-page":"e2584","DOI":"10.7717\/peerj.2584","article-title":"VSEARCH: A versatile open source tool for metagenomics","volume":"4","author":"Rognes","year":"2016","journal-title":"PeerJ"},{"key":"ref_38","doi-asserted-by":"crossref","first-page":"335","DOI":"10.1038\/nmeth.f.303","article-title":"QIIME allows analysis of high-throughput community sequencing data","volume":"7","author":"Caporaso","year":"2010","journal-title":"Nat. Methods"},{"key":"ref_39","doi-asserted-by":"crossref","first-page":"5261","DOI":"10.1128\/AEM.00062-07","article-title":"Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy","volume":"73","author":"Wang","year":"2007","journal-title":"Appl. Environ. Microb."},{"key":"ref_40","doi-asserted-by":"crossref","first-page":"W5","DOI":"10.1093\/nar\/gkn201","article-title":"NCBI BLAST: A better web interface","volume":"36","author":"Johnson","year":"2008","journal-title":"Nucleic Acids Res."},{"key":"ref_41","doi-asserted-by":"crossref","first-page":"531","DOI":"10.1111\/j.0006-341X.2002.00531.x","article-title":"Estimatin the number of species in a stochastic abundance model","volume":"58","author":"Chao","year":"2002","journal-title":"Biometrics"},{"key":"ref_42","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/j.1574-6941.2003.tb01040.x","article-title":"Using ecological diversity measures with bacterial communities","volume":"43","author":"Hill","year":"2003","journal-title":"FEMS Microbiol. Ecol."},{"key":"ref_43","doi-asserted-by":"crossref","first-page":"1186","DOI":"10.1017\/S0021859619000170","article-title":"Consistent improvements in soil biochemical properties and crop yields by organic fertilization for above-ground (rapeseed) and below-ground (sweet potato) crops","volume":"156","author":"Li","year":"2018","journal-title":"J. Agric. Sci."},{"key":"ref_44","doi-asserted-by":"crossref","unstructured":"Lin, W.W., Lin, M.H., Zhou, H.Y., Wu, H.M., Li, Z.W., and Lin, W.X. (2019). The effects of chemical and organic fertilizer usage on rhizosphere soil in tea orchards. PLoS ONE, 14.","DOI":"10.1371\/journal.pone.0217018"},{"key":"ref_45","doi-asserted-by":"crossref","first-page":"601","DOI":"10.1016\/j.scitotenv.2019.06.105","article-title":"High-throughput absolute quantification sequencing reveals the effect of different fertilizer applications on bacterial community in a tomato cultivated coastal saline soil","volume":"687","author":"Jiang","year":"2019","journal-title":"Sci. Total Environ."},{"key":"ref_46","doi-asserted-by":"crossref","first-page":"103426","DOI":"10.1016\/j.apsoil.2019.103426","article-title":"Long-term organic fertilization improves the productivity of kiwifruit (Actinidia chinensis Planch.) through increasing rhizosphere microbial diversity and network complexity","volume":"147","author":"Liu","year":"2020","journal-title":"Appl. Soil Ecol."},{"key":"ref_47","doi-asserted-by":"crossref","first-page":"136","DOI":"10.1016\/j.apsoil.2019.04.014","article-title":"Reshaping the rhizosphere microbiome by bio-organic amendment to enhance crop yield in a maize-cabbage rotation system","volume":"142","author":"Qiao","year":"2019","journal-title":"Appl. Soil Ecol."},{"key":"ref_48","first-page":"923","article-title":"Effects of bio-organic fertilizer on soil microbiome against Verticillium dahliae","volume":"18","author":"Jiang","year":"2016","journal-title":"Int. J. Agric. Biol."},{"key":"ref_49","doi-asserted-by":"crossref","first-page":"1855","DOI":"10.1016\/S2095-3119(14)60932-1","article-title":"Multiphasic characterization of a plant growth promoting bacterial strain, Burkholderia sp 7016 and its effect on tomato growth in the field","volume":"14","author":"Gao","year":"2015","journal-title":"J. Int. Agric."},{"key":"ref_50","doi-asserted-by":"crossref","first-page":"103769","DOI":"10.1016\/j.apsoil.2020.103769","article-title":"Root colonizing Burkholderia sp. AQ12 enhanced rice growth and upregulated tillering-responsive genes in rice","volume":"157","author":"Maqsood","year":"2020","journal-title":"Appl. Soil Ecol."},{"key":"ref_51","doi-asserted-by":"crossref","first-page":"13","DOI":"10.1007\/s11104-016-3075-y","article-title":"Fungal diversity associates with pluses and its influence on the subsequent wheat crop in the Canadian prairies","volume":"414","author":"Borrell","year":"2017","journal-title":"Plant Soil"},{"key":"ref_52","doi-asserted-by":"crossref","first-page":"4463","DOI":"10.1007\/s11033-019-04901-9","article-title":"Effect of Trichoderma spp. on Fusarium wilt disease of tomato","volume":"46","author":"Sallam","year":"2019","journal-title":"Mol. Biol. Rep."},{"key":"ref_53","doi-asserted-by":"crossref","unstructured":"Li, X.Q., Su, Y., Ahmed, T., Ren, H.Y., Javed, M.R., Yao, Y.L., An, Q.L., Yan, J.L., and Li, B. (2021). Effects of different organic fertilizers on improving soil from newly reclaimed land to crop soil. Agriculture, 11.","DOI":"10.3390\/agriculture11060560"},{"key":"ref_54","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1007\/s00709-010-0163-3","article-title":"Enhanced salt tolerance of transgenic tobacco plants by co-expression of PcINO1 and McIMT1 is accompanied by increased level of myo-inositol and methylated inositol","volume":"245","author":"Patra","year":"2010","journal-title":"Protoplasma"},{"key":"ref_55","doi-asserted-by":"crossref","first-page":"944","DOI":"10.1016\/j.scitotenv.2018.04.355","article-title":"Poplar and diclofenac pollution: A focus on physiology, oxidative stress and uptake in plant organs","volume":"15","author":"Pierattini","year":"2018","journal-title":"Sci. Total Environ."},{"key":"ref_56","first-page":"9381506","article-title":"Metagenomic analysis exploring taxonomic and functional diversity of soil microbial communities in sugarcane fields applied with organic fertilizer","volume":"2020","author":"Li","year":"2020","journal-title":"Biomed Res. Int."},{"key":"ref_57","doi-asserted-by":"crossref","first-page":"259","DOI":"10.1007\/s11104-015-2743-7","article-title":"Root and bacterial secretions regulate the interaction between plants and PGPR leading to distinct plant growth promotion effects","volume":"401","author":"Zhou","year":"2015","journal-title":"Plant Soil"},{"key":"ref_58","doi-asserted-by":"crossref","first-page":"734","DOI":"10.1105\/tpc.18.00899","article-title":"AMP and GMP catabolism in Arabidopsis converge on xanthosine, which is degraded by a nucleoside hydrolase heterocomplex","volume":"31","author":"Baccolini","year":"2019","journal-title":"Plant Cell"},{"key":"ref_59","doi-asserted-by":"crossref","first-page":"267","DOI":"10.1139\/cjb-2013-0225","article-title":"Rhizosphere interactions: Root exudates, microbes, and microbial communities","volume":"92","author":"Huang","year":"2014","journal-title":"Botany"},{"key":"ref_60","doi-asserted-by":"crossref","unstructured":"Jiang, J., Yuan, X., Huang, G., Shi, W., Yang, X., Jiang, Q., Jia, Y., Yang, X., and Jiang, H. (2020). Hepatopancreatic metabolomics shedding light on the mechanism underlying unsynchronized growth in giant freshwater prawn, Macrobrachium rosenbergii. PLoS ONE, 15.","DOI":"10.1371\/journal.pone.0243778"},{"key":"ref_61","doi-asserted-by":"crossref","first-page":"158","DOI":"10.1016\/j.jtbi.2018.11.005","article-title":"The regulatory role of shikimate in plant phenylalanine metabolism","volume":"462","author":"Adams","year":"2019","journal-title":"J. Theor. Biol."},{"key":"ref_62","doi-asserted-by":"crossref","first-page":"16","DOI":"10.1016\/j.mib.2018.01.010","article-title":"Exploring the function of bacterial chemotaxis","volume":"45","author":"Celani","year":"2018","journal-title":"Curr. Opin. Microbiol."},{"key":"ref_63","doi-asserted-by":"crossref","first-page":"1043","DOI":"10.3389\/fmicb.2020.01043","article-title":"Comparison of transcriptome profiles of the fungus Botrytis cinerea and insect pest Bradysia odoriphaga in response to benzothiazole","volume":"11","author":"Cui","year":"2020","journal-title":"Front. Microbiol."},{"key":"ref_64","doi-asserted-by":"crossref","first-page":"179","DOI":"10.1111\/evo.13817","article-title":"Spatial structure increases the benefits of antibiotic production in Streptomyces","volume":"74","author":"Westhoff","year":"2020","journal-title":"Evolution"},{"key":"ref_65","doi-asserted-by":"crossref","first-page":"422","DOI":"10.1097\/MCO.0000000000000189","article-title":"Galactose metabolism and health","volume":"18","author":"Coelho","year":"2015","journal-title":"Curr. Opin. Clin. Nutr. Metab. Care"},{"key":"ref_66","doi-asserted-by":"crossref","first-page":"87","DOI":"10.1186\/s13071-018-2660-8","article-title":"Fresh insights into the pyrimidine metabolism in the trypanosomatids","volume":"11","author":"Tiwari","year":"2018","journal-title":"Parasit Vectors"}],"container-title":["Plants"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.mdpi.com\/2223-7747\/10\/11\/2386\/pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,11]],"date-time":"2025-10-11T07:26:29Z","timestamp":1760167589000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.mdpi.com\/2223-7747\/10\/11\/2386"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021,11,5]]},"references-count":66,"journal-issue":{"issue":"11","published-online":{"date-parts":[[2021,11]]}},"alternative-id":["plants10112386"],"URL":"https:\/\/doi.org\/10.3390\/plants10112386","relation":{},"ISSN":["2223-7747"],"issn-type":[{"value":"2223-7747","type":"electronic"}],"subject":[],"published":{"date-parts":[[2021,11,5]]}}}