{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,12]],"date-time":"2026-06-12T10:07:14Z","timestamp":1781258834460,"version":"3.54.1"},"reference-count":65,"publisher":"MDPI AG","issue":"4","license":[{"start":{"date-parts":[[2023,3,29]],"date-time":"2023-03-29T00:00:00Z","timestamp":1680048000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100004281","name":"National Science Centre of Poland","doi-asserted-by":"publisher","award":["2015\/19\/B\/NZ4\/03234"],"award-info":[{"award-number":["2015\/19\/B\/NZ4\/03234"]}],"id":[{"id":"10.13039\/501100004281","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004281","name":"National Science Centre of Poland","doi-asserted-by":"publisher","award":["JP21fk0108097"],"award-info":[{"award-number":["JP21fk0108097"]}],"id":[{"id":"10.13039\/501100004281","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004281","name":"National Science Centre of Poland","doi-asserted-by":"publisher","award":["JP22fk0108634"],"award-info":[{"award-number":["JP22fk0108634"]}],"id":[{"id":"10.13039\/501100004281","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100004281","name":"National Science Centre of Poland","doi-asserted-by":"publisher","award":["P30GM114737"],"award-info":[{"award-number":["P30GM114737"]}],"id":[{"id":"10.13039\/501100004281","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Research Program on Emerging and Re-emerging Infectious Diseases of the Japan Agency for Medical Research and Development","award":["2015\/19\/B\/NZ4\/03234"],"award-info":[{"award-number":["2015\/19\/B\/NZ4\/03234"]}]},{"name":"Research Program on Emerging and Re-emerging Infectious Diseases of the Japan Agency for Medical Research and Development","award":["JP21fk0108097"],"award-info":[{"award-number":["JP21fk0108097"]}]},{"name":"Research Program on Emerging and Re-emerging Infectious Diseases of the Japan Agency for Medical Research and Development","award":["JP22fk0108634"],"award-info":[{"award-number":["JP22fk0108634"]}]},{"name":"Research Program on Emerging and Re-emerging Infectious Diseases of the Japan Agency for Medical Research and Development","award":["P30GM114737"],"award-info":[{"award-number":["P30GM114737"]}]},{"DOI":"10.13039\/100000002","name":"National Institute of General Medical Sciences of the National Institutes of Health","doi-asserted-by":"publisher","award":["2015\/19\/B\/NZ4\/03234"],"award-info":[{"award-number":["2015\/19\/B\/NZ4\/03234"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institute of General Medical Sciences of the National Institutes of Health","doi-asserted-by":"publisher","award":["JP21fk0108097"],"award-info":[{"award-number":["JP21fk0108097"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institute of General Medical Sciences of the National Institutes of Health","doi-asserted-by":"publisher","award":["JP22fk0108634"],"award-info":[{"award-number":["JP22fk0108634"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institute of General Medical Sciences of the National Institutes of Health","doi-asserted-by":"publisher","award":["P30GM114737"],"award-info":[{"award-number":["P30GM114737"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Viruses"],"abstract":"<jats:p>Earlier, we demonstrated the co-circulation of genetically distinct non-rodent-borne hantaviruses, including Boginia virus (BOGV) in the Eurasian water shrew (Neomys fodiens), Seewis virus (SWSV) in the Eurasian common shrew (Sorex araneus) and Nova virus (NVAV) in the European mole (Talpa europaea), in central Poland. To further investigate the phylogeny of hantaviruses harbored by soricid and talpid reservoir hosts, we analyzed RNAlater\u00ae-preserved lung tissues from 320 shrews and 26 moles, both captured during 1990\u20132017 across Poland, and 10 European moles from Ukraine for hantavirus RNA through RT-PCR and DNA sequencing. SWSV and Altai virus (ALTV) were detected in Sorex araneus and Sorex minutus in Boginia and the Bia\u0142owie\u017ca Forest, respectively, and NVAV was detected in Talpa europaea in Huta D\u0142utowska, Poland, and in Lviv, Ukraine. Phylogenetic analyses using maximum-likelihood and Bayesian methods showed geography-specific lineages of SWSV in Poland and elsewhere in Eurasia and of NVAV in Poland and Ukraine. The ATLV strain in Sorex minutus from the Bia\u0142owie\u017ca Forest on the Polish\u2013Belarusian border was distantly related to the ATLV strain previously reported in Sorex\u00a0minutus from Chmiel in southeastern Poland. Overall, the gene phylogenies found support long-standing host-specific adaptation.<\/jats:p>","DOI":"10.3390\/v15040881","type":"journal-article","created":{"date-parts":[[2023,3,30]],"date-time":"2023-03-30T03:17:35Z","timestamp":1680146255000},"page":"881","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":4,"title":["Phylogeny of Shrew- and Mole-Borne Hantaviruses in Poland and Ukraine"],"prefix":"10.3390","volume":"15","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1815-7113","authenticated-orcid":false,"given":"Fuka","family":"Kikuchi","sequence":"first","affiliation":[{"name":"Center for Surveillance, Immunization and Epidemiologic Research, National Institute of Infectious Diseases, Tokyo 162-8640, Japan"},{"name":"Center for Infectious Diseases Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Tokyo 183-8509, Japan"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5865-0717","authenticated-orcid":false,"given":"Satoru","family":"Arai","sequence":"additional","affiliation":[{"name":"Center for Surveillance, Immunization and Epidemiologic Research, National Institute of Infectious Diseases, Tokyo 162-8640, Japan"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Janusz","family":"Hejduk","sequence":"additional","affiliation":[{"name":"Department of Biodiversity Studies and Bioeducation, Faculty of Biology and Environmental Protection, University of \u0141\u00f3d\u017a, 90-237 \u0141\u00f3d\u017a, Poland"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ai","family":"Hayashi","sequence":"additional","affiliation":[{"name":"Center for Surveillance, Immunization and Epidemiologic Research, National Institute of Infectious Diseases, Tokyo 162-8640, Japan"},{"name":"Tohoku University Graduate School of Medicine, Sendai 980-8575, Japan"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Janusz","family":"Markowski","sequence":"additional","affiliation":[{"name":"Department of Biodiversity Studies and Bioeducation, Faculty of Biology and Environmental Protection, University of \u0141\u00f3d\u017a, 90-237 \u0141\u00f3d\u017a, Poland"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3113-9702","authenticated-orcid":false,"given":"Marcin","family":"Markowski","sequence":"additional","affiliation":[{"name":"Department of Experimental Zoology and Evolutionary Biology, Faculty of Biology and Environmental Protection, University of \u0141\u00f3d\u017a, 90-237 \u0141\u00f3d\u017a, Poland"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Leszek","family":"Rychlik","sequence":"additional","affiliation":[{"name":"Department of Systematic Zoology, Institute of Environmental Biology, Faculty of Biology, Adam Mickiewicz University, 61-614 Pozna\u0144, Poland"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vasyl","family":"Khodzinskyi","sequence":"additional","affiliation":[{"name":"Institute of Forestry and Park Gardening, Ukrainian National Forestry University, 79057 Lviv, Ukraine"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3698-9044","authenticated-orcid":false,"given":"Hajime","family":"Kamiya","sequence":"additional","affiliation":[{"name":"Center for Surveillance, Immunization and Epidemiologic Research, National Institute of Infectious Diseases, Tokyo 162-8640, Japan"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tetsuya","family":"Mizutani","sequence":"additional","affiliation":[{"name":"Center for Infectious Diseases Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Tokyo 183-8509, Japan"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Motoi","family":"Suzuki","sequence":"additional","affiliation":[{"name":"Center for Surveillance, Immunization and Epidemiologic Research, National Institute of Infectious Diseases, Tokyo 162-8640, Japan"},{"name":"Tohoku University Graduate School of Medicine, Sendai 980-8575, Japan"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Beata","family":"Sikorska","sequence":"additional","affiliation":[{"name":"Department of Molecular Pathology and Neuropathology, Medical University of \u0141\u00f3d\u017a, 92-216 \u0141\u00f3d\u017a, Poland"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pawe\u0142 P.","family":"Liberski","sequence":"additional","affiliation":[{"name":"Department of Molecular Pathology and Neuropathology, Medical University of \u0141\u00f3d\u017a, 92-216 \u0141\u00f3d\u017a, Poland"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9347-8614","authenticated-orcid":false,"given":"Richard","family":"Yanagihara","sequence":"additional","affiliation":[{"name":"Departments of Pediatrics and Tropical Medicine, Medical Microbiology and Pharmacology, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, HI 96813, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1968","published-online":{"date-parts":[[2023,3,29]]},"reference":[{"key":"ref_1","doi-asserted-by":"crossref","first-page":"927","DOI":"10.1007\/s00705-018-04127-3","article-title":"Taxonomy of the order Bunyavirales: Second update 2018","volume":"164","author":"Maes","year":"2019","journal-title":"Arch. Virol."},{"key":"ref_2","doi-asserted-by":"crossref","unstructured":"Laenen, L., Vergote, V., Calisher, C.H., Klempa, B., Klingstr\u00f6m, J., Kuhn, J.H., and Maes, P. (2019). Hantaviridae: Current Classification and Future Perspectives. Viruses, 11.","DOI":"10.3390\/v11090788"},{"key":"ref_3","doi-asserted-by":"crossref","first-page":"2677","DOI":"10.1099\/0022-1317-77-11-2677","article-title":"Hantaviruses: Genome structure, expression and evolution","volume":"77","author":"Plyusnin","year":"1996","journal-title":"J. Gen. 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