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(ERDF)","award":["PTDC\/CTA-AMB\/31774\/2017"],"award-info":[{"award-number":["PTDC\/CTA-AMB\/31774\/2017"]}]},{"name":"European Regional Development Fund (ERDF)","award":["POCI-01-0145-FEDER\/031774\/2017"],"award-info":[{"award-number":["POCI-01-0145-FEDER\/031774\/2017"]}]},{"name":"European Regional Development Fund (ERDF)","award":["NORTE-01-0145-FEDER-000064"],"award-info":[{"award-number":["NORTE-01-0145-FEDER-000064"]}]},{"name":"European Regional Development Fund (ERDF)","award":["NORTE-01-0145- FEDER-000040"],"award-info":[{"award-number":["NORTE-01-0145- FEDER-000040"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Fishes"],"abstract":"<jats:p>Chondrichthyes (including sharks, rays, and chimaeras) are a class of jawed cartilaginous fishes (with skeletons composed primarily of cartilage), with major relevance to the marine ecosystems and to humanity. However, cartilaginous fishes are facing various threatens, inflicting abrupt declines in their populations. Thus, critical assessment of available molecular genetic variation, particularly retrieved from Chondrichthyans\u2019 transcriptomic analyses, represents a major resource to foster genomics research in this ancient group of vertebrate species. Briefly, RNA-Seq involves the sequencing of RNA strands present on a target tissue, which can assist genome annotation and elucidate genetic features on species without a sequenced genome. The resulting information can unravel responses of an individual to environmental changes, evolutionary processes, and support the development of biomarkers. We scrutinized more than 800 RNA-Seq entries publicly available, and reviewed more than one decade of available transcriptomic knowledge in chondrichthyans. We conclude that chondrichthyans\u2019 transcriptomics is a subject in early development, since not all the potential of this technology has been fully explored, namely their use to prospectively preserve these endangered species. Yet, the transcriptomic database provided findings on the vertebrates\u2019 evolution, chondrichthyans\u2019 physiology, morphology, and their biomedical potential, a trend likely to expand further in the future.<\/jats:p>","DOI":"10.3390\/fishes8050271","type":"journal-article","created":{"date-parts":[[2023,5,19]],"date-time":"2023-05-19T09:23:10Z","timestamp":1684488190000},"page":"271","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":6,"title":["Decoding the Transcriptome of Sharks, Rays, and Chimaeras: Insights into Their Physiology, Morphology, Evolution, and Biomedical Applications"],"prefix":"10.3390","volume":"8","author":[{"given":"Manuel J.","family":"Seixas","sequence":"first","affiliation":[{"name":"CIIMAR\/CIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leix\u00f5es, Av. General Norton de Matos, s\/n, 4450-208 Porto, Portugal"},{"name":"Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre, s\/n, 4169-007 Porto, Portugal"}]},{"given":"Rodrigo R.","family":"Domingues","sequence":"additional","affiliation":[{"name":"CIIMAR\/CIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leix\u00f5es, Av. General Norton de Matos, s\/n, 4450-208 Porto, Portugal"},{"name":"Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre, s\/n, 4169-007 Porto, Portugal"},{"name":"Oceanographic Institute, Department of Biological Oceanography, University of Sao Paulo, Pra\u00e7a do Oceanogr\u00e1fico, 191, Cidade Universit\u00e1ria, S\u00e3o Paulo 05508-120, Brazil"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1328-1732","authenticated-orcid":false,"given":"Agostinho","family":"Antunes","sequence":"additional","affiliation":[{"name":"CIIMAR\/CIMAR, Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leix\u00f5es, Av. General Norton de Matos, s\/n, 4450-208 Porto, Portugal"},{"name":"Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre, s\/n, 4169-007 Porto, Portugal"}]}],"member":"1968","published-online":{"date-parts":[[2023,5,19]]},"reference":[{"key":"ref_1","doi-asserted-by":"crossref","first-page":"104906","DOI":"10.1016\/j.marpol.2021.104906","article-title":"Estimating the Pelagic Ocean\u2019s Benefits to Humanity Can Enhance Ocean Governance","volume":"136","author":"Teneva","year":"2022","journal-title":"Mar. Policy"},{"key":"ref_2","doi-asserted-by":"crossref","first-page":"157","DOI":"10.1111\/1477-8947.12047","article-title":"Connecting Stressors, Ocean Ecosystem Services, and Human Health","volume":"38","author":"Sandifer","year":"2014","journal-title":"Nat. Resour. Forum"},{"key":"ref_3","unstructured":"Heithaus, M., Frid, A., Vaudo, J., Worm, B., and Wirsing, A. (2010). 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