{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,22]],"date-time":"2026-10-22T13:44:33Z","timestamp":1792676673799,"version":"4.5.0"},"reference-count":17,"publisher":"MyJove Corporation","issue":"120","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["JoVE"],"DOI":"10.3791\/55133","type":"journal-article","created":{"date-parts":[[2017,2,15]],"date-time":"2017-02-15T19:00:11Z","timestamp":1487185211000},"source":"Crossref","is-referenced-by-count":1,"title":["Large-scale Reconstructions and Independent, Unbiased Clustering Based on Morphological Metrics to Classify Neurons in Selective Populations"],"prefix":"10.3791","author":[{"given":"Elise M.","family":"Bragg","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Farran","family":"Briggs","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"2098","published-online":{"date-parts":[[2017,2,15]]},"reference":[{"key":"ref1","type":"book","volume-title":"Histologie du systeme nerveaux de l'homme et des vertebres","author":"Cajal","year":"1911","unstructured":"Cajal, S. R. y. Histologie du systeme nerveaux de l'homme et des vertebres. Maloine (1911)."},{"key":"ref2","doi-asserted-by":"crossref","first-page":"170","DOI":"10.1038\/471170a","type":"journal-article","article-title":"Toward functional connectomics","volume":"471","author":"Seung","year":"2011","unstructured":"Seung, H. S. Toward functional connectomics. Nature. 471, 170-172 (2011).","journal-title":"Nature"},{"key":"ref3","first-page":"1","type":"journal-article","article-title":"Transneuronal circuit tracing with neurotropic viruses","volume":"18","author":"Callaway","year":"2009","unstructured":"Callaway, E. M. Transneuronal circuit tracing with neurotropic viruses. Current Opinion in Neurobiology. 18, 1-7 (2009).","journal-title":"Current Opinion in Neurobiology"},{"key":"ref4","doi-asserted-by":"crossref","first-page":"47","DOI":"10.1038\/nmeth999","type":"journal-article","article-title":"Retrograde neuronal tracing with a deletion-mutant rabies virus","volume":"4","author":"Wickersham","year":"2007","unstructured":"Wickersham, I. R., Finke, S., Conzelmann, K. K., & Callaway, E. M. Retrograde neuronal tracing with a deletion-mutant rabies virus. Nature Methods. 4, 47-49 (2007).","journal-title":"Nature Methods"},{"key":"ref5","doi-asserted-by":"crossref","first-page":"388","DOI":"10.1016\/j.neuron.2016.02.038","type":"journal-article","article-title":"Morphological substrates for parallel streams of corticogeniculate feedback originating in both V1 and V2 of the macaque monkey","volume":"90","author":"Briggs","year":"2016","unstructured":"Briggs, F., Kiley, C. W., Callaway, E. M., & Usrey, W. M. Morphological substrates for parallel streams of corticogeniculate feedback originating in both V1 and V2 of the macaque monkey. Neuron. 90, 388-399 (2016).","journal-title":"Neuron"},{"key":"ref6","doi-asserted-by":"crossref","first-page":"6144","DOI":"10.1073\/pnas.97.11.6144","type":"journal-article","article-title":"Classification of fusiform neocortical interneurons based on unsupervised clustering","volume":"97","author":"Cauli","year":"2000","unstructured":"Cauli, B. et al. Classification of fusiform neocortical interneurons based on unsupervised clustering. PNAS. 97, 6144-6149 (2000).","journal-title":"PNAS"},{"issue":"5","key":"ref7","doi-asserted-by":"crossref","first-page":"1273","DOI":"10.1002\/cne.24134","type":"journal-article","article-title":"Morphology of visual sector thalamic reticular neurons in the macaque monkey sugests retinotopically-specialized, parallel stream-mixed input to the lateral geniculate nucleus","volume":"525","author":"Bragg","year":"2017","unstructured":"Bragg, E.M., Fairless, E.A., Liu, S., Briggs, F. Morphology visual sector thalamic reticular neurons in the macaque monkey suggests retinotopically-specialized, parallel stream-mixed input to the lateral geniculate nucleus. J. Comparative Neurology. 525 (5) 1273-1290 (2017).","journal-title":"J. Comparative Neurology"},{"key":"ref8","doi-asserted-by":"crossref","first-page":"617","DOI":"10.1016\/j.neuron.2011.07.005","type":"journal-article","article-title":"New rabies virus varients for monitoring and manipulating activity and gene expression in defined neural circuits","volume":"71","author":"Osakada","year":"2011","unstructured":"Osakada, F. et al. New rabies virus varients for monitoring and manipulating activity and gene expression in defined neural circuits. Neuron. 71, 617-631 (2011).","journal-title":"Neuron"},{"key":"ref9","doi-asserted-by":"crossref","first-page":"8979","DOI":"10.1523\/JNEUROSCI.0409-15.2015","type":"journal-article","article-title":"Monosynaptic circuit tracing with glycoprotein-deleted rabies viruses","volume":"35","author":"Callaway","year":"2015","unstructured":"Callaway, E. M., & Luo, L. Monosynaptic circuit tracing with glycoprotein-deleted rabies viruses. Journal of Neuroscience. 35, 8979-8985 (2015).","journal-title":"Journal of Neuroscience"},{"key":"ref10","doi-asserted-by":"crossref","first-page":"52","DOI":"10.1002\/cne.22685","type":"journal-article","article-title":"Morphology of superior colliculus- and middle temporal area-projecting neurons in primate primary visual cortex","volume":"520","author":"Nhan","year":"2012","unstructured":"Nhan, H. L., & Callaway, E. M. Morphology of superior colliculus- and middle temporal area-projecting neurons in primate primary visual cortex. J. Comparative Neurology. 520, 52-80 (2012).","journal-title":"J. Comparative Neurology"},{"key":"ref11","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/j.brainresrev.2004.04.008","type":"journal-article","article-title":"The thalamic reticular nucleus: structure, function and concept","volume":"46","author":"Pinault","year":"2004","unstructured":"Pinault, D. The thalamic reticular nucleus: structure, function and concept. Brain Research Reviews. 46, 1-31 (2004).","journal-title":"Brain Research Reviews"},{"key":"ref12","first-page":"e3564","type":"journal-article","article-title":"Whole Animal Perfusion Fixation for Rodents","volume":"65","author":"Gage","year":"2012","unstructured":"Gage, G. J., Kipke, D. R., & Shain, W. Whole Animal Perfusion Fixation for Rodents. Journal of Visualized Experiments. 65, e3564 (2012).","journal-title":"Journal of Visualized Experiments"},{"key":"ref13","doi-asserted-by":"crossref","first-page":"11","DOI":"10.1016\/0006-8993(79)90728-5","type":"journal-article","article-title":"Changes in the visual system of monocularly sutured or enucleated cats demonstrable with cytochrome oxidase histochemistry","volume":"171","author":"Wong-Riley","year":"1979","unstructured":"Wong-Riley, M. Changes in the visual system of monocularly sutured or enucleated cats demonstrable with cytochrome oxidase histochemistry. Brain Research. 171, 11-28 (1979).","journal-title":"Brain Research"},{"key":"ref14","first-page":"Unit 1.1","type":"journal-article","article-title":"Basic neuroanatomical methods","volume":"Chapter 1","author":"Gerfen","year":"2003","unstructured":"Gerfen, C. R. Basic neuroanatomical methods. Current Protocols in Neuroscience. Chapter 1, Unit 1.1 (2003).","journal-title":"Current Protocols in Neuroscience"},{"key":"ref15","doi-asserted-by":"crossref","first-page":"267","DOI":"10.1007\/BF02289263","type":"journal-article","article-title":"Who belongs in the family?","volume":"18","author":"Thorndike","year":"1953","unstructured":"Thorndike, R. L. Who belongs in the family? Psychometrika. 18, 267-276 (1953).","journal-title":"Psychometrika"},{"key":"ref16","doi-asserted-by":"crossref","first-page":"2556","DOI":"10.1152\/jn.00659.2015","type":"journal-article","article-title":"Categorically distinct types of receptive fields in early visual cortex","volume":"115","author":"Talebi","year":"2016","unstructured":"Talebi, V., & Baker, C. I. Categorically distinct types of receptive fields in early visual cortex. Journal of Neurophysiology. 115, 2556-2576 (2016).","journal-title":"Journal of Neurophysiology"},{"key":"ref17","doi-asserted-by":"crossref","first-page":"168","DOI":"10.1038\/nature12346","type":"journal-article","article-title":"Connectomic reconstruction of the inner plexiform layer in the mouse retina","volume":"500","author":"Helmstaedter","year":"2013","unstructured":"Helmstaedter, M. et al. Connectomic reconstruction of the inner plexiform layer in the mouse retina. Nature. 500, 168-174 (2013).","journal-title":"Nature"}],"container-title":["Journal of Visualized Experiments"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/www.jove.com\/video\/55133\/large-scale-reconstructions-independent-unbiased-clustering-based-on","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,10,22]],"date-time":"2026-10-22T13:33:10Z","timestamp":1792675990000},"score":1,"resource":{"primary":{"URL":"https:\/\/app.jove.com\/t\/55133"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,2,15]]},"references-count":17,"journal-issue":{"issue":"120","published-online":{"date-parts":[[2017]]}},"URL":"https:\/\/doi.org\/10.3791\/55133","relation":{},"ISSN":["1940-087X"],"issn-type":[{"value":"1940-087X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,2,15]]}}}