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In the literature of decision-making, several approaches from the domains of CSC and AF have been used autonomously to support decisions. It is our belief that with the combination of these two fields the authors can propose socially fair decisions which take into account both (1) the involved agents' preferences and (2) the justifications behind these preferences. Therefore, this article implements a software tool for decision-making which is composed of two main systems, i.e., the social choice system and the deliberation system. In this article, the authors describe thoroughly the social choice system of our tool and how it can be applied to different alternatives on the valorization of materials coming from agriculture. As an example, that is demonstrated an application of our tool in the context of Ecobiocap European project where several decision problems are to be addressed. 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