{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,13]],"date-time":"2026-08-13T20:39:23Z","timestamp":1786653563296,"version":"build-2736575974"},"reference-count":38,"publisher":"Ovid Technologies (Wolters Kluwer Health)","issue":"3","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2013]]},"abstract":"<jats:sec>\n                    <jats:title>Background:<\/jats:title>\n                    <jats:p>\n                      The emergence of extensively drug-resistant tuberculosis (XDR-TB) is a major concern in the India. The burden of XDR-TB is increasing due to inadequate monitoring, lack of proper diagnosis, and treatment. The GenoType\n                      <jats:sup>\u00ae<\/jats:sup>\n                      <jats:italic toggle=\"yes\">Mycobacterium tuberculosis<\/jats:italic>\n                      drug resistance second line (MTBDR\n                      <jats:italic toggle=\"yes\">sl<\/jats:italic>\n                      ) assay is a novel line probe assay used for the rapid detection of mutational patterns conferring resistance to XDR-TB.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Aim:<\/jats:title>\n                    <jats:p>\n                      The aim of this study was to study the rapid detection of drug resistance and mutational patterns of the XDR-TB by a novel GenoType\n                      <jats:sup>\u00ae<\/jats:sup>\n                      MTBDR\n                      <jats:italic toggle=\"yes\">sl<\/jats:italic>\n                      assay.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Materials and Methods:<\/jats:title>\n                    <jats:p>\n                      We evaluated 98 multidrug-resistant (MDR)\n                      <jats:italic toggle=\"yes\">M. tuberculosis<\/jats:italic>\n                      isolates for second line drugs susceptibility testing by 1% proportion method (BacT\/ALERT 3D system) and GenoType\n                      <jats:sup>\u00ae<\/jats:sup>\n                      MTBDR\n                      <jats:italic toggle=\"yes\">sl<\/jats:italic>\n                      assay for rapid detection of conferring drug resistance to XDR-TB.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results:<\/jats:title>\n                    <jats:p>\n                      A total of seven (17.4%) were identified as XDR-TB by using standard phenotypic method. The concordance between phenotypic and GenoType\n                      <jats:sup>\u00ae<\/jats:sup>\n                      MTBDR\n                      <jats:italic toggle=\"yes\">sl<\/jats:italic>\n                      assay was 91.7-100% for different antibiotics. The sensitivity and specificity of the MTBDR\n                      <jats:italic toggle=\"yes\">sl<\/jats:italic>\n                      assay were 100% and 100% for aminoglycosides; 100% and 100% for fluoroquinolones; 91.7% and 100% for ethambutol. The most frequent mutations and patterns were\n                      <jats:italic toggle=\"yes\">gyrA<\/jats:italic>\n                      MUT1 (A90V) in seven (41.2%) and\n                      <jats:italic toggle=\"yes\">gyrA<\/jats:italic>\n                      +\n                      <jats:italic toggle=\"yes\">WT1-3<\/jats:italic>\n                      + MUT1 in four (23.5%);\n                      <jats:italic toggle=\"yes\">rrs<\/jats:italic>\n                      MUT1 (A1401G) in 11 (64.7%), and\n                      <jats:italic toggle=\"yes\">rrs WT1-2<\/jats:italic>\n                      + MUT1 in eight (47.1%); and\n                      <jats:italic toggle=\"yes\">embB<\/jats:italic>\n                      MUT1B (M306V) in 11 (64.7%) strains.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusions:<\/jats:title>\n                    <jats:p>\n                      These data suggest that the GenoType\n                      <jats:sup>\u00ae<\/jats:sup>\n                      MTBDR\n                      <jats:italic toggle=\"yes\">sl<\/jats:italic>\n                      assay is rapid, novel test for detection of resistance to second line anti-tubercular drugs. This assay provides additional information about the frequency and mutational patterns responsible for XDR-TB resistance.\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.4103\/0022-3859.118034","type":"journal-article","created":{"date-parts":[[2013,9,12]],"date-time":"2013-09-12T04:17:55Z","timestamp":1378959475000},"page":"179-185","source":"Crossref","is-referenced-by-count":9,"title":["Rapid detection of drug resistance and mutational patterns of extensively drug-resistant strains by a novel GenoType\u00ae MTBDRsl assay"],"prefix":"10.4103","volume":"59","author":[{"given":"AK","family":"Singh","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"AK","family":"Maurya","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S","family":"Kant","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"J","family":"Umrao","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"RAS","family":"Kushwaha","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"VL","family":"Nag","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"TN","family":"Dhole","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"276","reference":[{"key":"R2-4-20240205","doi-asserted-by":"crossref","first-page":"1050","DOI":"10.1056\/NEJMra0908076","article-title":"MDR tuberculosis-critical steps for prevention and control","volume":"363","author":"Nathanson","year":"2010","journal-title":"N Engl J Med"},{"key":"R3-4-20240205","doi-asserted-by":"crossref","first-page":"479","DOI":"10.1086\/505877","article-title":"Global incidence of multidrug-resistant tuberculosis","volume":"194","author":"Zignol","year":"2006","journal-title":"J Infect Dis"},{"key":"R5-4-20240205","first-page":"48","article-title":"Multi-drug resistant tuberculosis: An iatrogenic problem","volume":"4","author":"Kant","year":"2010","journal-title":"Biosci Trends"},{"key":"R6-4-20240205","doi-asserted-by":"crossref","first-page":"7672","DOI":"10.1073\/pnas.0812472106","article-title":"Averting epidemics of extensively drug-resistant tuberculosis","volume":"106","author":"Basu","year":"2009","journal-title":"Proc Natl Acad Sci U S A"},{"key":"R7-4-20240205","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1155\/2008\/857901","article-title":"Diagnosis of multidrug-resistant tuberculosis and extensively drug-resistant tuberculosis: Current standards and challenges","volume":"19","author":"Migliori","year":"2008","journal-title":"Can J Infect Dis Med Microbiol"},{"key":"R9-4-20240205","first-page":"392","article-title":"Prevalence of extensively drug-resistant tuberculosis among patients with multidrug-resistant tuberculosis: A retrospective hospital-based study","volume":"130","author":"Sharma","year":"2009","journal-title":"Indian J Med Res"},{"key":"R10-4-20240205","doi-asserted-by":"crossref","first-page":"19","DOI":"10.3855\/jidc.669","article-title":"Multidrug-resistant and extensively drug resistant tuberculosis in Kashmir, India","volume":"4","author":"Datta","year":"2010","journal-title":"J Infect Dev Ctries"},{"key":"R11-4-20240205","doi-asserted-by":"crossref","first-page":"4880","DOI":"10.1128\/JCM.43.9.4880-4884.2005","article-title":"Direct application of the INNO-LiPA Rif.TB line-probe assay for rapid identification of Mycobacterium tuberculosis complex strains and detection of rifampin resistance in 360 smear-positive respiratory specimens from an area of high incidence of multidrug-resistant tuberculosis","volume":"43","author":"Viveiros","year":"2005","journal-title":"J Clin Microbiol"},{"key":"R12-4-20240205","doi-asserted-by":"crossref","first-page":"3660","DOI":"10.1128\/JCM.00618-08","article-title":"GenoType MTBDRplus assay for molecular detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis strains and clinical samples","volume":"46","author":"Lacoma","year":"2008","journal-title":"J Clin Microbiol"},{"key":"R13-4-20240205","doi-asserted-by":"crossref","first-page":"2605","DOI":"10.1128\/JCM.00752-06","article-title":"Rapid genotypic detection of rifampin- and isoniazid-resistant Mycobacterium tuberculosis directly in clinical specimens","volume":"44","author":"Bang","year":"2006","journal-title":"J Clin Microbiol"},{"key":"R14-4-20240205","doi-asserted-by":"crossref","first-page":"3699","DOI":"10.1128\/JCM.43.8.3699-3703.2005","article-title":"Use of the genotype MTBDR assay for rapid detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis complex isolates","volume":"43","author":"Hillemann","year":"2005","journal-title":"J Clin Microbiol"},{"key":"R15-4-20240205","first-page":"1057","article-title":"Application of the Genotype MTBDR assay directly on sputum specimens","volume":"10","author":"Hillemann","year":"2006","journal-title":"Int J Tuberc Lung Dis"},{"key":"R16-4-20240205","doi-asserted-by":"crossref","first-page":"1165","DOI":"10.1183\/09031936.00061808","article-title":"GenoType MTBDR assays for the diagnosis of multidrug-resistant tuberculosis: A meta-analysis","volume":"32","author":"Ling","year":"2008","journal-title":"Eur Respir J"},{"key":"R17-4-20240205","doi-asserted-by":"crossref","first-page":"4459","DOI":"10.1128\/JCM.01506-06","article-title":"Use of smear-positive samples to assess the PCR-based genotype MTBDR assay for rapid, direct detection of the Mycobacterium tuberculosis complex as well as its resistance to isoniazid and rifampin","volume":"44","author":"Somoskovi","year":"2006","journal-title":"J Clin Microbiol"},{"key":"R18-4-20240205","doi-asserted-by":"crossref","first-page":"2084","DOI":"10.1128\/AAC.42.8.2084","article-title":"Correlation between quinolone susceptibility patterns and sequences in the A and B subunits of DNA gyrase in mycobacteria","volume":"42","author":"Guillemin","year":"1998","journal-title":"Antimicrob Agents Chemother"},{"key":"R19-4-20240205","doi-asserted-by":"crossref","first-page":"108","DOI":"10.1007\/s10517-008-0034-5","article-title":"Detection of mutations in Mycobacterium tuberculosis genome determining resistance to fluoroquinolones by hybridization on biological microchips","volume":"145","author":"Antonova","year":"2008","journal-title":"Bull Exp Biol Med"},{"key":"R20-4-20240205","doi-asserted-by":"crossref","first-page":"2937","DOI":"10.1128\/AAC.00036-08","article-title":"Molecular characterization of ofloxacin-resistant Mycobacterium tuberculosis strains from Russia","volume":"52","author":"Mokrousov","year":"2008","journal-title":"Antimicrob Agents Chemother"},{"key":"R21-4-20240205","first-page":"736","article-title":"Fluoroquinolone resistance detection in Mycobacterium tuberculosis with locked nucleic acid probe real-time PCR","volume":"12","author":"van Doorn","year":"2008","journal-title":"Int J Tuberc Lung Dis"},{"key":"R22-4-20240205","doi-asserted-by":"crossref","first-page":"1295","DOI":"10.1128\/AAC.42.5.1295","article-title":"Mechanism of resistance to amikacin and kanamycin in Mycobacterium tuberculosis","volume":"42","author":"Alangaden","year":"1998","journal-title":"Antimicrob Agents Chemother"},{"key":"R23-4-20240205","doi-asserted-by":"crossref","first-page":"3192","DOI":"10.1128\/AAC.49.8.3192-3197.2005","article-title":"Molecular analysis of cross-resistance to capreomycin, kanamycin, amikacin, and viomycin in Mycobacterium tuberculosis","volume":"49","author":"Maus","year":"2005","journal-title":"Antimicrob Agents Chemother"},{"key":"R24-4-20240205","doi-asserted-by":"crossref","first-page":"571","DOI":"10.1128\/AAC.49.2.571-577.2005","article-title":"Mutation of tlyA confers capreomycin resistance in Mycobacterium tuberculosis","volume":"49","author":"Maus","year":"2005","journal-title":"Antimicrob Agents Chemother"},{"key":"R25-4-20240205","doi-asserted-by":"crossref","first-page":"1900","DOI":"10.1128\/AAC.50.5.1900-1902.2006","article-title":"Significance of mutations in embB codon 306 for prediction of ethambutol resistance in clinical Mycobacterium tuberculosis isolates","volume":"50","author":"Plinke","year":"2006","journal-title":"Antimicrob Agents Chemother"},{"key":"R26-4-20240205","doi-asserted-by":"crossref","first-page":"2027","DOI":"10.1128\/AAC.01486-07","article-title":"Transfer of embB codon 306 mutations into clinical Mycobacterium tuberculosis strains alters susceptibility to ethambutol, isoniazid, and rifampin","volume":"52","author":"Safi","year":"2008","journal-title":"Antimicrob Agents Chemother"},{"key":"R28-4-20240205","first-page":"1086","article-title":"Evaluation of the MB\/BacT drug susceptibility system for INH, RMP, SM, EMB. A cooperative study of 6 laboratories","volume":"3","author":"Beer","year":"1997","journal-title":"Clin Microbiol Infect"},{"key":"R29-4-20240205","doi-asserted-by":"crossref","first-page":"1148","DOI":"10.1046\/j.1469-0691.2003.00783.x","article-title":"Evaluation of the BacT\/ALERT 3D system for recovery and drug susceptibility testing of Mycobacterium tuberculosis","volume":"9","author":"Angeby","year":"2003","journal-title":"Clin Microbiol Infect"},{"key":"R30-4-20240205","doi-asserted-by":"crossref","first-page":"263","DOI":"10.1590\/S0074-02762002000200021","article-title":"Direct sensitivity test of the MB\/BacT system","volume":"97","author":"Barreto","year":"2002","journal-title":"Mem Inst Oswaldo Cruz"},{"key":"R31-4-20240205","doi-asserted-by":"crossref","first-page":"651","DOI":"10.1128\/JCM.39.2.651-657.2001","article-title":"Comparison of MB\/Bact alert 3D system with radiometric BACTEC system and Lowenstein-Jensen medium for recovery and identification of mycobacteria from clinical specimens: A multicenter study","volume":"39","author":"Piersimoni","year":"2001","journal-title":"J Clin Microbiol"},{"key":"R32-4-20240205","doi-asserted-by":"crossref","first-page":"422","DOI":"10.1590\/S1413-86702009000600007","article-title":"Standardization of first and second-line antitubercular susceptibility testing using BacT Alert 3D system: A report from a tertiary care centre in India","volume":"13","author":"Nair","year":"2009","journal-title":"Braz J Infect Dis"},{"key":"R33-4-20240205","doi-asserted-by":"crossref","first-page":"1767","DOI":"10.1128\/JCM.00081-09","article-title":"Feasibility of the GenoType MTBDRsl assay for fluoroquinolone, amikacin-capreomycin, and ethambutol resistance testing of Mycobacterium tuberculosis strains and clinical specimens","volume":"47","author":"Hillemann","year":"2009","journal-title":"J Clin Microbiol"},{"key":"R34-4-20240205","doi-asserted-by":"crossref","first-page":"1683","DOI":"10.1128\/JCM.01947-09","article-title":"Detection by GenoType MTBDRsl test of complex mechanisms of resistance to second-line drugs and ethambutol in multidrug-resistant Mycobacterium tuberculosis complex isolates","volume":"48","author":"Brossier","year":"2010","journal-title":"J Clin Microbiol"},{"key":"R35-4-20240205","doi-asserted-by":"crossref","first-page":"2934","DOI":"10.1128\/JCM.00201-10","article-title":"Evaluation of the MTBDRsl test for detection of second-line-drug resistance in Mycobacterium tuberculosis","volume":"48","author":"Kiet","year":"2010","journal-title":"J Clin Microbiol"},{"key":"R36-4-20240205","doi-asserted-by":"crossref","first-page":"2502","DOI":"10.1128\/JCM.00197-11","article-title":"Performance assessment of the GenoType MTBDRsl test and DNA sequencing for detection of second-line and ethambutol drug resistance among patients infected with multidrug-resistant Mycobacterium tuberculosis","volume":"49","author":"Huang","year":"2011","journal-title":"J Clin Microbiol"},{"key":"R37-4-20240205","doi-asserted-by":"crossref","first-page":"104","DOI":"10.5588\/ijtld.10.0600","article-title":"Evaluation of the GenoType(R) MTBDRsl assay for susceptibility testing of second-line anti-tuberculosis drugs","volume":"16","author":"Said","year":"2012","journal-title":"Int J Tuberc Lung Dis"},{"key":"R38-4-20240205","doi-asserted-by":"crossref","first-page":"2749","DOI":"10.1128\/JCM.00652-10","article-title":"Comparative study on genotypic and phenotypic second-line drug resistance testing of Mycobacterium tuberculosis complex isolates","volume":"48","author":"van Ingen","year":"2010","journal-title":"J Clin Microbiol"},{"key":"R39-4-20240205","doi-asserted-by":"crossref","first-page":"37","DOI":"10.1186\/1471-2334-12-37","article-title":"Analysis of gene mutations associated with isoniazid, rifampicin and ethambutol resistance among Mycobacterium tuberculosis isolates from Ethiopia","volume":"12","author":"Tessema","year":"2012","journal-title":"BMC Infect Dis"},{"key":"R40-4-20240205","first-page":"231","article-title":"Quality assurance programme for drug susceptibility testing of Mycobacterium tuberculosis in the WHO\/IUATLD Supranational Laboratory Network: First round of proficiency testing","volume":"1","author":"Laszlo","year":"1997","journal-title":"Int J Tuberc Lung Dis"},{"key":"R41-4-20240205","first-page":"748","article-title":"WHO\/IUATLD Network of Supranational Reference Laboratories. Quality assurance programme for drug susceptibility testing of Mycobacterium tuberculosis in the WHO\/IUATLD Supranational Reference Laboratory Network: Five rounds of proficiency testing, 1994-1998","volume":"6","author":"Laszlo","year":"2002","journal-title":"Int J Tuberc Lung Dis"},{"key":"R42-4-20240205","doi-asserted-by":"crossref","first-page":"564","DOI":"10.1183\/09031936.05.00111304","article-title":"Drug-susceptibility testing in tuberculosis: Methods and reliability of results","volume":"25","author":"Kim","year":"2005","journal-title":"Eur Respir J"}],"container-title":["Journal of Postgraduate Medicine"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.ovid.com\/00005257-201359030-00004","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,8,13]],"date-time":"2026-08-13T19:39:22Z","timestamp":1786649962000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.ovid.com\/00005257-201359030-00004"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013]]},"references-count":38,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2013]]}},"URL":"https:\/\/doi.org\/10.4103\/0022-3859.118034","relation":{},"ISSN":["0022-3859"],"issn-type":[{"value":"0022-3859","type":"print"}],"subject":[],"published":{"date-parts":[[2013]]}}}