{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,7]],"date-time":"2026-10-07T06:30:33Z","timestamp":1791354633488,"version":"4.3.1"},"reference-count":36,"publisher":"Scientific Scholar","issue":"6","content-domain":{"domain":["lww.com","ovid.com"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2016,12]]},"abstract":"<jats:sec>\n            <jats:title>Background &amp; objectives:<\/jats:title>\n            <jats:p>Chronic obstructive pulmonary disease (COPD) is a complex chronic inflammatory disease of the respiratory system affecting primarily distal respiratory pathways and lung parenchyma. This study was aimed at investigating the association of COPD with <jats:italic toggle=\"yes\">IREB2<\/jats:italic>, <jats:italic toggle=\"yes\">CHRNA5<\/jats:italic>, <jats:italic toggle=\"yes\">CHRNA3<\/jats:italic>, <jats:italic toggle=\"yes\">FAM13A<\/jats:italic> and hedgehog interacting protein (<jats:italic toggle=\"yes\">HHIP<\/jats:italic>) genes in a Tatar population from Russia.<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Methods:<\/jats:title>\n            <jats:p>Six single nucleotide polymorphisms (SNPs) (rs13180, rs16969968, rs1051730, rs6495309, rs7671167, rs13118928) were genotyped by the real-time polymerase chain reaction in this study (511 COPD patients and 508 controls). Logistic regression was used to detect the association of SNPs and haplotypes of linked loci in different models. Linear regression analyses were performed to estimate the relationship between SNPs and lung function parameters and pack-years.<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Results:<\/jats:title>\n            <jats:p>The rs13180 (<jats:italic toggle=\"yes\">IREB2<\/jats:italic>), rs16969968 (<jats:italic toggle=\"yes\">CHRNA5<\/jats:italic>) and rs1051730 (<jats:italic toggle=\"yes\">CHRNA3<\/jats:italic>) were significantly associated with COPD in additive model [<jats:italic toggle=\"yes\">P<\/jats:italic>\n                                 <jats:sub>adj<\/jats:sub>=0.00001, odds ratio (OR)=0.64; <jats:italic toggle=\"yes\">P<\/jats:italic>\n                                 <jats:sub>adj<\/jats:sub>=0.0001, OR=1.41 and <jats:italic toggle=\"yes\">P<\/jats:italic>\n                                 <jats:sub>adj<\/jats:sub>=0.0001, OR=1.47]. The C-G haplotype by rs13180 and rs1051730 was a protective factor for COPD in our population (<jats:italic toggle=\"yes\">P<\/jats:italic>\n                                 <jats:sub>adj<\/jats:sub>=0.0005, OR=0.61). These results were confirmed only in smokers. The rs16969968 and rs1051730 were associated with decrease of forced expiratory volume in 1 sec % predicted (<jats:italic toggle=\"yes\">P<\/jats:italic>\n                                 <jats:sub>adj<\/jats:sub>=0.005 and <jats:italic toggle=\"yes\">P<\/jats:italic>\n                                 <jats:sub>adj<\/jats:sub>=0.0019).<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Interpretation &amp; conclusions:<\/jats:title>\n            <jats:p>Our study showed the association of rs13180, rs16969968 and rs1051730 with COPD and lung function in Tatar population from Russia. Further studies need to be done in other ethnic populations.<\/jats:p>\n          <\/jats:sec>","DOI":"10.4103\/ijmr.ijmr_1233_14","type":"journal-article","created":{"date-parts":[[2017,4,28]],"date-time":"2017-04-28T13:56:29Z","timestamp":1493387789000},"page":"865-876","update-policy":"https:\/\/doi.org\/10.1097\/lww.0000000000001000","source":"Crossref","is-referenced-by-count":14,"title":["IREB2, CHRNA5, CHRNA3, FAM13A &amp; hedgehog interacting protein genes polymorphisms &amp; risk of chronic obstructive pulmonary disease in Tatar population from Russia"],"prefix":"10.25259","volume":"144","author":[{"given":"Gulnaz Faritovna","family":"Korytina","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Leysan Zinurovna","family":"Akhmadishina","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Elena Vitalievna","family":"Viktorova","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Olga Vladimirovna","family":"Kochetova","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tatyana Victorovna","family":"Viktorova","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"10894","reference":[{"key":"R2-12-20241212","doi-asserted-by":"crossref","first-page":"121","DOI":"10.3109\/15412555.2011.558864","article-title":"Opportunities and challenges in the genetics of COPD 2010: an International COPD Genetics Conference report","volume":"8","author":"Silverman","year":"2011","journal-title":"COPD"},{"key":"R3-12-20241212","doi-asserted-by":"crossref","first-page":"200","DOI":"10.1038\/ng.535","article-title":"Variants in FAM13A are associated with chronic obstructive pulmonary disease","volume":"42","author":"Cho","year":"2010","journal-title":"Nat Genet"},{"key":"R4-12-20241212","doi-asserted-by":"crossref","first-page":"e1000421","DOI":"10.1371\/journal.pgen.1000421","article-title":"A genome-wide association study in chronic obstructive pulmonary disease (COPD): identification of two major susceptibility loci","volume":"5","author":"Pillai","year":"2009","journal-title":"PLoS Genet"},{"key":"R5-12-20241212","doi-asserted-by":"crossref","first-page":"493","DOI":"10.1016\/j.ajhg.2009.09.004","article-title":"Integration of genomic and genetic approaches implicates IREB2 as a COPD susceptibility gene","volume":"85","author":"DeMeo","year":"2009","journal-title":"Am J Hum Genet"},{"key":"R6-12-20241212","doi-asserted-by":"crossref","first-page":"1498","DOI":"10.1164\/rccm.201002-0151OC","article-title":"Loci identified by genome-wide association studies influence different disease-related phenotypes in chronic obstructive pulmonary disease","volume":"182","author":"Pillai","year":"2010","journal-title":"Am J Respir Crit Care Med"},{"key":"R7-12-20241212","doi-asserted-by":"crossref","first-page":"894","DOI":"10.1136\/thoraxjnl-2011-200154","article-title":"Genome-wide association study of smoking behaviours in patients with COPD","volume":"66","author":"Siedlinski","year":"2011","journal-title":"Thorax"},{"key":"R8-12-20241212","doi-asserted-by":"crossref","first-page":"1325","DOI":"10.1093\/hmg\/ddr569","article-title":"Identification of a chronic obstructive pulmonary disease genetic determinant that regulates HHIP","volume":"21","author":"Zhou","year":"2012","journal-title":"Hum Mol Genet"},{"key":"R9-12-20241212","doi-asserted-by":"crossref","first-page":"1683","DOI":"10.1016\/j.clinbiochem.2013.07.013","article-title":"Association of FAM13A polymorphisms with COPD and COPD-related phenotypes in Han Chinese","volume":"46","author":"Wang","year":"2013","journal-title":"Clin Biochem"},{"key":"R10-12-20241212","doi-asserted-by":"crossref","first-page":"203","DOI":"10.1165\/rcmb.2012-0011OC","article-title":"CHRNA3\/5, IREB2, and ADCY2 are associated with severe chronic obstructive pulmonary disease in Poland","volume":"47","author":"Hardin","year":"2012","journal-title":"Am J Respir Cell Mol Biol"},{"key":"R11-12-20241212","doi-asserted-by":"crossref","first-page":"24","DOI":"10.1186\/1471-2350-12-24","article-title":"The role of IREB2 and transforming growth factor beta-1 genetic variants in COPD: a replication case-control study","volume":"12","author":"Chappell","year":"2011","journal-title":"BMC Med Genet"},{"key":"R12-12-20241212","doi-asserted-by":"crossref","first-page":"1293","DOI":"10.1038\/ejhg.2013.26","article-title":"Association between a 15q25 gene variant, nicotine-related habits, lung cancer and COPD among 56,307 individuals from the HUNT study in Norway","volume":"21","author":"Gabrielsen","year":"2013","journal-title":"Eur J Hum Genet"},{"key":"R13-12-20241212","doi-asserted-by":"crossref","first-page":"45","DOI":"10.1038\/ng.500","article-title":"Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function","volume":"42","author":"Hancock","year":"2010","journal-title":"Nat Genet"},{"key":"R14-12-20241212","doi-asserted-by":"crossref","first-page":"158","DOI":"10.1186\/1465-9921-12-158","article-title":"Nicotinic acetylcholine receptor variants associated with susceptibility to chronic obstructive pulmonary disease: a meta-analysis","volume":"12","author":"Zhang","year":"2011","journal-title":"Respir Res"},{"key":"R15-12-20241212","doi-asserted-by":"crossref","first-page":"5344","DOI":"10.1093\/hmg\/dds372","article-title":"Genetic variation in the 15q25 nicotinic acetylcholine receptor gene cluster (CHRNA5-CHRNA3-CHRNB4) interacts with maternal self-reported smoking status during pregnancy to influence birth weight","volume":"21","author":"Tyrrell","year":"2012","journal-title":"Hum Mol Genet"},{"key":"R16-12-20241212","doi-asserted-by":"crossref","first-page":"194","DOI":"10.1016\/j.cmet.2010.06.007","article-title":"Iron regulatory proteins secure mitochondrial iron sufficiency and function","volume":"12","author":"Galy","year":"2010","journal-title":"Cell Metab"},{"key":"R17-12-20241212","doi-asserted-by":"crossref","first-page":"374","DOI":"10.1016\/j.ygeno.2004.03.005","article-title":"Cloning and characterization of FAM13A1 \u2013 A gene near a milk protein QTL on BTA6: evidence for population-wide linkage disequilibrium in Israeli Holsteins","volume":"84","author":"Cohen","year":"2004","journal-title":"Genomics"},{"key":"R18-12-20241212","doi-asserted-by":"crossref","first-page":"1457","DOI":"10.1016\/j.jaci.2011.01.056","article-title":"Importance of hedgehog interacting protein and other lung function genes in asthma","volume":"127","author":"Li","year":"2011","journal-title":"J Allergy Clin Immunol"},{"key":"R19-12-20241212","doi-asserted-by":"crossref","first-page":"89","DOI":"10.1183\/09031936.00129509","article-title":"Hedgehog-interacting protein is a COPD susceptibility gene: the Rotterdam Study","volume":"36","author":"Van Durme","year":"2010","journal-title":"Eur Respir J"},{"key":"R20-12-20241212","doi-asserted-by":"crossref","first-page":"e1000429","DOI":"10.1371\/journal.pgen.1000429","article-title":"A genome-wide association study of pulmonary function measures in the Framingham Heart Study","volume":"5","author":"Wilk","year":"2009","journal-title":"PLoS Genet"},{"key":"R23-12-20241212","doi-asserted-by":"crossref","first-page":"5","DOI":"10.1183\/09041950.005s1693","article-title":"Lung volumes and forced ventilatory flows. Report Working Party Standardization of Lung Function Tests, European Community for Steel and Coal. Official Statement of the European Respiratory Society","volume":"16","author":"Quanjer","year":"1993","journal-title":"Eur Respir J Suppl"},{"key":"R24-12-20241212","doi-asserted-by":"crossref","first-page":"454","DOI":"10.1016\/S0954-6111(98)90291-8","article-title":"Prediction equations for plethysmographic lung volumes","volume":"92","author":"Roca","year":"1998","journal-title":"Respir Med"},{"key":"R26-12-20241212","first-page":"31","article-title":"The isolation of high molecular weight eukaryotic DNA","volume":"2","author":"Mathew","year":"1985","journal-title":"Methods Mol Biol"},{"key":"R27-12-20241212","doi-asserted-by":"crossref","first-page":"1928","DOI":"10.1093\/bioinformatics\/btl268","article-title":"SNPStats: a web tool for the analysis of association studies","volume":"22","author":"Sol\u00e9","year":"2006","journal-title":"Bioinformatics"},{"key":"R28-12-20241212","doi-asserted-by":"crossref","first-page":"559","DOI":"10.1086\/519795","article-title":"PLINK: a tool set for whole-genome association and population-based linkage analyses","volume":"81","author":"Purcell","year":"2007","journal-title":"Am J Hum Genet"},{"key":"R29-12-20241212","doi-asserted-by":"crossref","first-page":"263","DOI":"10.1093\/bioinformatics\/bth457","article-title":"Haploview: analysis and visualization of LD and haplotype maps","volume":"21","author":"Barrett","year":"2005","journal-title":"Bioinformatics"},{"key":"R30-12-20241212","doi-asserted-by":"crossref","first-page":"738","DOI":"10.1038\/jhg.2012.104","article-title":"Association of IREB2 and CHRNA3\/5 polymorphisms with COPD and COPD-related phenotypes in a Chinese Han population","volume":"57","author":"Zhou","year":"2012","journal-title":"J Hum Genet"},{"key":"R31-12-20241212","doi-asserted-by":"crossref","first-page":"5065","DOI":"10.1158\/0008-5472.CAN-09-0081","article-title":"Genetic variants on chromosome 15q25 associated with lung cancer risk in Chinese populations","volume":"69","author":"Wu","year":"2009","journal-title":"Cancer Res"},{"key":"R32-12-20241212","doi-asserted-by":"crossref","first-page":"16","DOI":"10.1186\/1465-9921-13-16","article-title":"Association of IREB2 and CHRNA3 polymorphisms with airflow obstruction in severe alpha-1 antitrypsin deficiency","volume":"13","author":"Kim","year":"2012","journal-title":"Respir Res"},{"key":"R33-12-20241212","first-page":"40","article-title":"Genetic aspects of occupational chronic obstructive lung disease under exposure to various risk factors","volume":"3","author":"Shpagina","year":"2014","journal-title":"Med Tr Prom Ekol"},{"key":"R34-12-20241212","doi-asserted-by":"crossref","first-page":"431","DOI":"10.1007\/s00439-012-1262-3","article-title":"Dissecting direct and indirect genetic effects on chronic obstructive pulmonary disease (COPD) susceptibility","volume":"132","author":"Siedlinski","year":"2013","journal-title":"Hum Genet"},{"key":"R35-12-20241212","doi-asserted-by":"crossref","first-page":"5863","DOI":"10.2174\/092986712804143312","article-title":"Role of CHRNA5-A3 genetic locus variants and developing drug for chronic obstructive pulmonary disease","volume":"19","author":"Lococo","year":"2012","journal-title":"Curr Med Chem"},{"key":"R36-12-20241212","doi-asserted-by":"crossref","first-page":"1536","DOI":"10.3346\/jkms.2012.27.12.1536","article-title":"A functional polymorphism in the CHRNA3 gene and risk of chronic obstructive pulmonary disease in a Korean population","volume":"27","author":"Lee","year":"2012","journal-title":"J Korean Med Sci"},{"key":"R37-12-20241212","doi-asserted-by":"crossref","first-page":"e46071","DOI":"10.1371\/journal.pone.0046071","article-title":"Functional polymorphisms of CHRNA3 predict risks of chronic obstructive pulmonary disease and lung cancer in Chinese","volume":"7","author":"Yang","year":"2012","journal-title":"PLoS One"},{"key":"R38-12-20241212","doi-asserted-by":"crossref","first-page":"101","DOI":"10.1016\/j.gene.2013.08.069","article-title":"Association of HHIP polymorphisms with COPD and COPD-related phenotypes in a Chinese Han population","volume":"531","author":"Wang","year":"2013","journal-title":"Gene"},{"key":"R39-12-20241212","doi-asserted-by":"crossref","first-page":"e89957","DOI":"10.1371\/journal.pone.0089957","article-title":"Genetic determinants of chronic obstructive pulmonary disease in South Indian male smokers","volume":"9","author":"Arja","year":"2014","journal-title":"PLoS One"},{"key":"R40-12-20241212","doi-asserted-by":"crossref","first-page":"597","DOI":"10.1097\/RCT.0000000000000077","article-title":"Quantitative analysis of lungs and airways with CT in subjects with the chronic obstructive pulmonary disease (COPD) candidate FAM13A gene: case control study for CT quantification in COPD risk gene","volume":"38","author":"Choo","year":"2014","journal-title":"J Comput Assist Tomogr"}],"container-title":["Indian Journal of Medical Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.lww.com\/02223309-201644060-00012","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,7,2]],"date-time":"2025-07-02T23:01:30Z","timestamp":1751497290000},"score":1,"resource":{"primary":{"URL":"https:\/\/ijmr.org.in\/ireb2-chrna5-chrna3-fam13a-hedgehog-interacting-protein-genes-polymorphisms-risk-of-chronic-obstructive-pulmonary-disease-in-tatar-population-from-russia\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,12]]},"references-count":36,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2016]]}},"URL":"https:\/\/doi.org\/10.4103\/ijmr.ijmr_1233_14","relation":{},"ISSN":["0971-5916"],"issn-type":[{"value":"0971-5916","type":"print"}],"subject":[],"published":{"date-parts":[[2016,12]]}}}