{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,9]],"date-time":"2025-10-09T12:50:23Z","timestamp":1760014223471,"version":"3.41.0"},"reference-count":23,"publisher":"Scientific Scholar","issue":"3","content-domain":{"domain":["lww.com","ovid.com"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2017,9]]},"abstract":"<jats:sec>\n            <jats:title>Background &amp; objectives:<\/jats:title>\n            <jats:p>Genomic constitution of the bacterium <jats:italic toggle=\"yes\">Legionella pneumophila<\/jats:italic> plays an important role in providing them a pathogenic potential. Here, we report the standardization and application of multiplex polymerase chain reaction (PCR) for the detection of molecular markers of pathogenic potential in <jats:italic toggle=\"yes\">L. pneumophila<\/jats:italic> in hospital environment.<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Methods:<\/jats:title>\n            <jats:p>Culture of the standard strains of <jats:italic toggle=\"yes\">L. pneumophila<\/jats:italic> was performed in buffered charcoal-yeast extract agar with L-cysteine at <jats:italic toggle=\"yes\">p<\/jats:italic>H 6.9. Primers were designed for multiplex PCR, and standardization for the detection of five markers annotated to <jats:italic toggle=\"yes\">L. pneumophila<\/jats:italic> plasmid pLPP (11A2), lipopolysaccharide synthesis (19H4), CMP-N-acetylneuraminic acid synthetase (10B12), conjugative coupling factor (24B1) and hypothetical protein (8D6) was done. A total of 195 water samples and 200 swabs were collected from the hospital environment. The bacterium was isolated from the hospital environment by culture and confirmed by 16S rRNA gene PCR and restriction enzyme analysis. A total of 45 <jats:italic toggle=\"yes\">L. pneumophila<\/jats:italic> isolates were studied using the standardized multiplex PCR.<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Results:<\/jats:title>\n            <jats:p>The PCR was sensitive to detect 0.1 ng\/\u03bcl DNA and specific for the two standard strains used in the study. Of the 45 hospital isolates tested, 11 isolates had four markers, 12 isolates had three markers, 10 isolates had two markers, nine isolates had one marker and three isolates had none of the markers. None of the isolates had all the five markers.<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Interpretation &amp; conclusions:<\/jats:title>\n            <jats:p>The findings of this study showed the presence of gene markers of pathogenic potential of the bacterium <jats:italic toggle=\"yes\">L. pneumophila<\/jats:italic>. However, the genomic constitution of the environmental isolates should be correlated with clinical isolates to prove their pathogenic potential. Rapid diagnostic methods such as multiplex PCR reported here, for elucidating gene markers, could help in future epidemiological studies of bacterium <jats:italic toggle=\"yes\">L. pneumophila<\/jats:italic>.<\/jats:p>\n          <\/jats:sec>","DOI":"10.4103\/ijmr.ijmr_623_16","type":"journal-article","created":{"date-parts":[[2024,12,19]],"date-time":"2024-12-19T19:15:56Z","timestamp":1734635756000},"page":"392-400","update-policy":"https:\/\/doi.org\/10.1097\/lww.0000000000001000","source":"Crossref","is-referenced-by-count":2,"title":["Multiplex polymerase chain reaction of genetic markers for detection of potentially pathogenic environmental Legionella pneumophila isolates"],"prefix":"10.25259","volume":"146","author":[{"given":"Arvind","family":"Valavane","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rama","family":"Chaudhry","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Pawan","family":"Malhotra","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"10894","reference":[{"key":"R1-16-20241212","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1128\/CMR.00029-14","article-title":"Current and emerging Legionella diagnostics for laboratory and outbreak investigations","volume":"28","author":"Mercante","year":"2015","journal-title":"Clin Microbiol Rev"},{"key":"R2-16-20241212","doi-asserted-by":"crossref","first-page":"127","DOI":"10.1086\/341087","article-title":"Distribution of Legionella species and serogroups isolated by culture in patients with sporadic community-acquired legionellosis: An international collaborative survey","volume":"186","author":"Yu","year":"2002","journal-title":"J Infect Dis"},{"key":"R3-16-20241212","doi-asserted-by":"crossref","first-page":"376","DOI":"10.1016\/S0140-6736(15)60078-2","article-title":"Legionnaires\u2019 disease","volume":"387","author":"Cunha","year":"2016","journal-title":"Lancet"},{"key":"R4-16-20241212","first-page":"21356","article-title":"Population structure and minimum core genome typing of Legionella pneumophila","volume":"6","author":"Qin","year":"2016","journal-title":"Nat Sci Rep"},{"key":"R5-16-20241212","doi-asserted-by":"crossref","first-page":"78","DOI":"10.1111\/j.1469-0691.2006.01558.x","article-title":"Comparison of clinical and environmental isolates of Legionella pneumophila obtained in the UK over 19 years","volume":"13","author":"Harrison","year":"2007","journal-title":"Clin Microbiol Infect"},{"key":"R6-16-20241212","doi-asserted-by":"crossref","first-page":"682","DOI":"10.1056\/NEJM199709043371006","article-title":"Legionellosis","volume":"337","author":"Stout","year":"1997","journal-title":"N Engl J Med"},{"key":"R7-16-20241212","doi-asserted-by":"crossref","first-page":"368","DOI":"10.1016\/S1473-3099(02)00291-8","article-title":"Hospital-acquired legionellosis: Solutions for a preventable infection","volume":"2","author":"Sabria","year":"2002","journal-title":"Lancet Infect Dis"},{"key":"R8-16-20241212","doi-asserted-by":"crossref","first-page":"433","DOI":"10.1186\/1471-2164-11-433","article-title":"Comparative genome analysis of a large Dutch Legionella pneumophila strain collection identifies five markers highly correlated with clinical strains","volume":"11","author":"Yzerman","year":"2010","journal-title":"BMC Genomics"},{"key":"R9-16-20241212","doi-asserted-by":"crossref","first-page":"433","DOI":"10.1128\/JCM.01778-09","article-title":"Two-step scheme for rapid identification and differentiation of Legionella pneumophila and non-Legionella pneumophila species","volume":"48","author":"Zhan","year":"2010","journal-title":"J Clin Microbiol"},{"key":"R10-16-20241212","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1186\/1471-2105-11-143","article-title":"MPprimer: A program for reliable multiplex PCR primer design","volume":"11","author":"Shen","year":"2010","journal-title":"BMC Bioinformatics"},{"key":"R12-16-20241212","doi-asserted-by":"crossref","first-page":"2047","DOI":"10.1128\/JCM.43.5.2047-2052.2005","article-title":"Consensus sequence-based scheme for epidemiological typing of clinical and environmental isolates of Legionella pneumophila","volume":"43","author":"Gaia","year":"2005","journal-title":"J Clin Microbiol"},{"key":"R13-16-20241212","doi-asserted-by":"crossref","first-page":"536","DOI":"10.1186\/1471-2164-12-536","article-title":"Extensive recombination events and horizontal gene transfer shaped the Legionella pneumophila genomes","volume":"12","author":"Gomez-Valero","year":"2011","journal-title":"BMC Genomics"},{"key":"R14-16-20241212","doi-asserted-by":"crossref","first-page":"710","DOI":"10.1007\/s10096-002-0820-3","article-title":"Pan-European study on culture-proven Legionnaires\u2019 disease: Distribution of Legionella pneumophila serogroups and monoclonal subgroups","volume":"21","author":"Helbig","year":"2002","journal-title":"Eur J Clin Microbiol Infect Dis"},{"key":"R15-16-20241212","doi-asserted-by":"crossref","first-page":"e47437","DOI":"10.1371\/journal.pone.0047437","article-title":"Genome analysis of Legionella pneumophila strains using a mixed-genome microarray","volume":"7","author":"Euser","year":"2012","journal-title":"PLoS One"},{"key":"R16-16-20241212","doi-asserted-by":"crossref","first-page":"435","DOI":"10.1186\/1471-2164-14-435","article-title":"Prediction of the origin of French Legionella pneumophila strains using a mixed-genome 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infection in community acquired pneumonia","volume":"131","author":"Javed","year":"2010","journal-title":"Indian J Med Res"},{"key":"R21-16-20241212","doi-asserted-by":"crossref","first-page":"324","DOI":"10.4103\/0255-0857.136590","article-title":"Legionella pneumophila infection associated with renal failure causing fatality in a known case of sarcoidosis","volume":"32","author":"Chaudhry","year":"2014","journal-title":"Indian J Med Microbiol"},{"key":"R22-16-20241212","first-page":"761","article-title":"Isolation of Legionella pneumophila from clinical & environmental sources in a tertiary care hospital","volume":"131","author":"Anbumani","year":"2010","journal-title":"Indian J Med Res"},{"key":"R23-16-20241212","first-page":"4582","article-title":"Clinical prevalence of Legionella, associated risk and clinical features","volume":"5","author":"Anbumani","year":"2014","journal-title":"Int J Biol Med Res"},{"key":"R24-16-20241212","doi-asserted-by":"crossref","first-page":"3502","DOI":"10.1128\/AEM.02878-08","article-title":"Viability PCR, a culture-independent method for rapid and selective quantification of viable Legionella pneumophila cells in environmental water samples","volume":"75","author":"Delgado-Viscogliosi","year":"2009","journal-title":"Appl Environ Microbiol"}],"container-title":["Indian Journal of Medical Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.lww.com\/02223309-201746030-00016","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,7,2]],"date-time":"2025-07-02T22:59:22Z","timestamp":1751497162000},"score":1,"resource":{"primary":{"URL":"https:\/\/ijmr.org.in\/multiplex-polymerase-chain-reaction-of-genetic-markers-for-detection-of-potentially-pathogenic-environmental-legionella-pneumophila-isolates\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,9]]},"references-count":23,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2017]]}},"URL":"https:\/\/doi.org\/10.4103\/ijmr.ijmr_623_16","relation":{},"ISSN":["0971-5916"],"issn-type":[{"type":"print","value":"0971-5916"}],"subject":[],"published":{"date-parts":[[2017,9]]}}}