{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,12]],"date-time":"2026-09-12T05:08:13Z","timestamp":1789189693004,"version":"build-2803163510"},"reference-count":55,"publisher":"The Society for Antibacterial and Antifungal Agents, Japan","issue":"3","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2026]]},"DOI":"10.4265\/jmc.31.3_105","type":"journal-article","created":{"date-parts":[[2026,9,9]],"date-time":"2026-09-09T22:13:05Z","timestamp":1788991985000},"page":"105-113","source":"Crossref","is-referenced-by-count":0,"title":["Endophytic fungi isolated from coffee plants promote &lt;i&gt;Arabidopsis thaliana&lt;\/i&gt; growth and suppress soil-borne fungal pathogens"],"prefix":"10.4265","volume":"31","author":[{"given":"BRENDA DEL ROSARIO","family":"SALDA\u00d1A-MORALES","sequence":"first","affiliation":[{"name":"Biofertilizers and Bioinsecticides Laboratory, University of Science and Arts of Chiapas"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"VIDAL","family":"HERN\u00c1NDEZ-GARC\u00cdA","sequence":"additional","affiliation":[{"name":"Biofertilizers and Bioinsecticides Laboratory, University of Science and Arts of Chiapas"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"NIDIA DEL CARMEN R\u00cdOS-DE","family":"LE\u00d3N","sequence":"additional","affiliation":[{"name":"Biofertilizers and Bioinsecticides Laboratory, University of Science and Arts of Chiapas"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"CLAUDIO","family":"R\u00cdOS-VELASCO","sequence":"additional","affiliation":[{"name":"Food and Development Research Center"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"DANIEL ALONSO","family":"P\u00c9REZ-CORRAL","sequence":"additional","affiliation":[{"name":"Food and Development Research Center"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"SERGIO","family":"CASAS-FLORES","sequence":"additional","affiliation":[{"name":"IPICYT, Molecular Biology Divisio\u0301n, Functional and Comparative Genomics Laboratory"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"MIGUEL \u00c1NGEL","family":"SALAS-MARINA","sequence":"additional","affiliation":[{"name":"Biofertilizers and Bioinsecticides Laboratory, University of Science and Arts of Chiapas"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"2789","reference":[{"key":"1","doi-asserted-by":"publisher","unstructured":"Aceves, M.A.C., Hern\u00e1ndez, M.J., Toledo, A.R., Sabino, L.J.E., and Romero, R.T. (2019) Antagonistic capacity of native <i>Trichoderma<\/i> spp. against <i>Phytophthora<\/i> <i>parasitica<\/i> and <i>Fusarium<\/i> <i>oxysporum<\/i> isolated from hibiscus crops (in Spanish). <i>Rev. Fitotec. Mex.<\/i>, <b>42 <\/b>(3), 235-241. https:\/\/doi.org\/10.35196\/rfm.2019.3.235","DOI":"10.35196\/rfm.2019.3.235"},{"key":"2","doi-asserted-by":"publisher","unstructured":"Afzal, I., Shinwari, K.Z., Sikandar, S., and Shahzad, S. (2019) Plant beneficial endophytic bacteria: mechanisms, diversity, host and genetic determinants. <i>Microbiol. Res.<\/i>, <b>221<\/b>, 36-49. https:\/\/doi.org\/10.1016\/j.micres.2019.02.001","DOI":"10.1016\/j.micres.2019.02.001"},{"key":"3","doi-asserted-by":"crossref","unstructured":"Aguilar A.M.E. (2022). Identification of microbial diversity in <i>Coffea<\/i> <i>arabica<\/i> and <i>Coffea<\/i> <i>canephora<\/i> under different cultivation and processing methods using next-generation mass sequencing and the prevalence of ochratoxin A in Chiapas coffee (in Spanish). Doctoral thesis, Metropolitan Autonomous University, Iztapalapa Unit. https:\/\/doi.org\/10.24275\/uami.hx11xf43r","DOI":"10.24275\/uami.hx11xf43r"},{"key":"4","doi-asserted-by":"crossref","unstructured":"Altschul, S.F., Gish, W., Miller, W., Myers, W.E., and Lipman, D.J. (1990) Basic local alignment search tool. <i>J. Mol. Biol.<\/i>, <b>215<\/b>, 403-410. https:\/\/doi.org\/10.1016\/S0022-2836(05)80360-2","DOI":"10.1016\/S0022-2836(05)80360-2"},{"key":"5","doi-asserted-by":"publisher","unstructured":"Asad, S., Priyashantha, A.K.H., Tibpromma, S., Luo, Y., Zhang, J., Fan, Z., Zhao, L., Shen, K., Niu, C., Lu, L., Promputtha, I., and Karunarathna, S. (2023) Coffee-Associated Endophytes: Plant Growth Promotion and Crop Protection. <i>Biology<\/i>, <b>12<\/b> (7), 911. https:\/\/doi.org\/10.3390\/biology12070911","DOI":"10.3390\/biology12070911"},{"key":"6","doi-asserted-by":"publisher","unstructured":"Bongiorno, V.A., Rhoden, S.A., Garc\u00eda, A., Polonio, J.C., Azevedo, J.L., Pereira, J.O., and Pamphile, J.A. (2016) Genetic diversity of endophytic fungi from <i>Coffea arabica<\/i> cv. IAPAR-59 in organic crops. <i>Ann. Microbiol.<\/i>, <b>66<\/b>, 855-865. https:\/\/doi.org\/10.1007\/s13213-015-1168-0","DOI":"10.1007\/s13213-015-1168-0"},{"key":"7","doi-asserted-by":"crossref","unstructured":"Castrillo, M., Bich, G., Sioli, G., Zapata, P., and Villalba, L. (2021) Biocontrol capacity of native isolates of <i>Trichoderma<\/i> sp. Against the phytopathogenic fungus Alternaria alternata, isolated from yerba mate (Ilex paraguariensis Saint Hil). <i>Chil. J. Agric. Anim Sci<\/i>., <b>37<\/b> (3), 244-256. https:\/\/doi.org\/10.29393\/CHJAAS37-26CB ML50026","DOI":"10.29393\/CHJAAS37-26CBML50026"},{"key":"8","doi-asserted-by":"publisher","unstructured":"Corral, M.J.J., Garc\u00eda-Saucedo, P.A., Aguirre-Paleo, S., Vargas-Sandoval, M., Guzm\u00e1n-de Casa, A., and \u00c1vila-Val, T.C. (2024) Antagonistic microorganisms for managing blackberry wilt caused by <i>Fusarium<\/i> <i>oxysporum<\/i> (in Spanish). <i>Rev. Mex. Cienc. Agr\u00edc.<\/i>, <b>15<\/b> (3). https:\/\/doi.org\/10.29312\/remexca.v15i3.3655","DOI":"10.29312\/remexca.v15i3.3655"},{"key":"9","unstructured":"De Von, C.M., Herrera, R., and Cortez, M. (2023) Characterization of endophytic fungi in ruminant pastures in the Santa Ana district, Los Santos province (in Spanish). <i>Rev. semilla este.<\/i>, <b>3<\/b> (2), 99-121. https:\/\/revistas.up.ac.pa\/index.php\/semilla_este\/article\/view\/3761"},{"key":"10","doi-asserted-by":"publisher","unstructured":"Fiorentino, N., Ventorino, V., Woo, S.L., Pepe, O., De Rosa, A., Gioia, L., Romano, I., Lombardi, N., Napolitano, M., Colla, G., and Rouphael, Y. (2018) <i>Trichoderma<\/i>-Based Biostimulants Modulate Rhizosphere Microbial Populations and Improve N Uptake Efficiency, Yield, and Nutritional Quality of Leafy Vegetables. <i>Front.<\/i> <i>Plant<\/i> <i>Sci.<\/i>, <b>9<\/b>, 743. http:\/\/dx.doi.org\/10.3389\/fpls.2018.00743","DOI":"10.3389\/fpls.2018.00743"},{"key":"#cr-split#-11.1","unstructured":"Flores, F.V. (2015) Coffee production in Mexico: a window of opportunity for Chiapas&apos"},{"key":"#cr-split#-11.2","unstructured":"agricultural sector (in Spanish). <i>R&amp;D Space, Innovation plus Development.<\/i>, <b>4<\/b>, 174-194. http:\/\/dx.doi.org\/10.3 1644\/IMASD.7.2015.a07"},{"key":"12","unstructured":"Garc\u00eda, N.G. (2018) Evaluation of the quality and production methods of biopesticides for the management of <i>Hemileia<\/i> <i>vastatrix<\/i> in coffee plantations (in Spanish). Doctoral thesis, Tropical Agricultural Research and Higher Education Center, Turrialba. https:\/\/repositorio.catie.ac.cr\/handle\/11554\/8823"},{"key":"13","doi-asserted-by":"publisher","unstructured":"Garrido, R.M., and Vilela, S.N. (2019) Antagonistic capacity of <i>Trichoderma<\/i> <i>harzianum<\/i> against <i>Rhizoctonia<\/i>, <i>Nakatea<\/i> <i>sigmoidea<\/i> and <i>Sclerotium<\/i> <i>rolfsii<\/i> and its effect on native <i>Trichoderma<\/i> strains isolated from rice crops (in Spanish). <i>Sci. Agropecu.<\/i>, <b>10<\/b>, 199-206. https:\/\/doi.org\/10.17268\/sci.agropecu.2019.02.05","DOI":"10.17268\/sci.agropecu.2019.02.05"},{"key":"14","unstructured":"Gonz\u00e1lez-Marquetti, I., Infante-Mart\u00ednez, D., Arias-Vargas, Y., Gorrita-Ram\u00edrez, S., Hern\u00e1ndez-Garc\u00eda, T., de la Noval-Pons, B.M., Mart\u00ednez-Coca, B., and Peteira, B. (2019) Effect of <i>Trichoderma<\/i> <i>asperellum<\/i> Samuels, Lieckfeldt &amp; Nirenberg on growth and development indicators of <i>Phaseolus<\/i> <i>vulgaris<\/i> L. cultivar BAT-304 (in Spanish). <i>Rev. protecci\u00f3n veg.<\/i>, <b>34<\/b>, 1-10. https:\/\/censa.edicionescervantes.com\/index.php\/RPV\/article\/view\/1032"},{"key":"15","doi-asserted-by":"publisher","unstructured":"Hern\u00e1ndez, M.D.J., Ferrera, C.R., and Alarc\u00f3n, A. (2019). <i>Trichoderma<\/i>: agricultural and biotechnological importance, and fermentation systems to produce biomass and enzymes of industrial interest (in Spanish). <i>Chil. J. Agric. Anim Sci.<\/i>, <b>35<\/b>, 98-112. http:\/\/dx.doi.org\/10.4067\/S0719-38902019005000205","DOI":"10.4067\/S0719-38902019005000205"},{"key":"16","unstructured":"Herrera, R., de Von Chong, M., Artola, A., Tu\u00f1on, J., Cruz, A., Camargo, V., Gonz\u00e1lez, F., and Mej\u00eda, F. (2023) Characterization of beneficial microorganisms for the biological control of rice pathogens (in Spanish). <i>Sci. Agropecu<\/i>., <b>37<\/b>, 35-61. http:\/\/www.revistacienciaagropecuaria.ac.pa\/index.php\/ciencia-agropecuaria\/article\/view\/615"},{"key":"17","doi-asserted-by":"publisher","unstructured":"Hoyos-Andrade. P., Luna, C.A., Osorio, H.E., Molina, G.E., Landero, V.N., and Barrales, C.H.J. (2019) Antagonism of <i>Trichoderma<\/i> spp. vs. fungi associated with chili pepper wilt (in Spanish). <i>Rev. Mex. Cienc. Agr\u00edc.<\/i>, <b>10<\/b>, 1259-1272. https:\/\/doi.org\/10.29312\/remexca.v10i6.1326","DOI":"10.29312\/remexca.v10i6.1326"},{"key":"18","doi-asserted-by":"publisher","unstructured":"Hoyos-Andrade, P., Rivera-Jim\u00e9nez, M.N., Landero-Valenzuela, N., Silva-Rojas, H.V., Mart\u00ednez-Salgado, S., and Romero-Arenas, O. (2023) Ecological and biological benefits of the cosmopolitan fungus <i>Trichoderma<\/i> spp. in agriculture: a perspective from the Mexican countryside (in Spanish). <i>Rev. Argent. Microbiol.<\/i>, <b>55<\/b>, 366-377. https:\/\/doi.org\/10.1016\/j.ram.2023.06.005","DOI":"10.1016\/j.ram.2023.06.005"},{"key":"19","doi-asserted-by":"publisher","unstructured":"Husseiny, S., Dishisha, T., Soliman, H.A., Adeleke, R., and Raslan, M. (2021) Characterization of growth promoting bacterial endophytes isolated from<i> Artemisia annua <\/i>L. <i>S. African J. Bot.<\/i>, <b>143<\/b>, 238-247. https:\/\/doi.org\/10.1016\/j.sajb.2021.07.042","DOI":"10.1016\/j.sajb.2021.07.042"},{"key":"20","unstructured":"Hyder, S., Inam-Ul, H.M., Bibi, S., and Humayun, M.A. (2017) Novel potential of <i>Trichoderma <\/i>spp. as biocontrol agent. <i>J. Entomol. Zool. Stud.<\/i>, <b>5<\/b>, 214-222. https:\/\/www.entomoljournal.com\/archives\/ 2017\/vol5issue4\/PartC\/5-3-244-140.pdf"},{"key":"21","doi-asserted-by":"crossref","unstructured":"Khan, M.S., Gao, J., Munir, I., Zhang, M., Liu, Y., Moe T,S., Xue, J., and Zhang, X. (2021) Characterization of endophytic fungi, <i>Acremonium<\/i> sp., from <i>Lilium davidii<\/i> and analysis of its antifungal and plant growth-promoting effects. <i>Hindawi BioMed Research International<\/i>., <b>11<\/b>, 1-14. https:\/\/doi.org\/10.1155\/2021\/9930210","DOI":"10.1155\/2021\/9930210"},{"key":"22","doi-asserted-by":"publisher","unstructured":"Li, Y.T., Hwang, S.G., Huang, Y.M., and Huang, C.H. (2018) Effects of <i>Trichoderma asperellum<\/i> on nutrient uptake and <i>Fusarium<\/i> wilt of tomato. <i>Crop Protection.<\/i>, <b>110<\/b>, 275-282. https:\/\/doi.org\/10.1016\/j.cropro.2017.03.021","DOI":"10.1016\/j.cropro.2017.03.021"},{"key":"23","doi-asserted-by":"publisher","unstructured":"Louden, C.B., Haarmann, D., and Lynne M.A. (2011) Use of blue agar CAS Assay for Siderophore detection. <i>J. Microbiol. Biol. educ.<\/i>, <b>12<\/b>, 51-53. https:\/\/doi.org\/10.1128\/jmbe.v12i1.249","DOI":"10.1128\/jmbe.v12i1.249"},{"key":"24","doi-asserted-by":"publisher","unstructured":"Lu, L., Karunarathna, S.C., Hyde, K.D., Suwannarach, N., Elgorban, A.M., Stephenson, S.L., Al-Rejaie, S., Jayawardena, S.R., and Tibpromma, S. (2022) Endophytic fungi associated with coffee leaves in China exhibited in vitro antagonism against fungal and bacterial pathogens. <i>J. Fungi.<\/i>, <b>8<\/b>, 698. https:\/\/doi.org\/10.3390\/jof8070698","DOI":"10.3390\/jof8070698"},{"key":"25","doi-asserted-by":"publisher","unstructured":"Mart\u00ednez, M.T.O., Guerrero, A.B.Z., Pecina, Q.V., Rivas, V.P., Gonz\u00e1lez, P.E., and Angeles, N.J.G. (2020) Antagonism of <i>Trichoderma<\/i> <i>harzianum<\/i> against chickpea <i>Fusarium<\/i> wilt and its biofertilizer effect. <i>Rev. Mex. Cienc. Agr\u00edc.<\/i>, <b>11<\/b>, 1135-1147. https:\/\/doi.org\/10.29312\/remexca.v11i5.2325","DOI":"10.29312\/remexca.v11i5.2325"},{"key":"26","unstructured":"Mart\u00ednez P.E., and P\u00e9rez, V.L. (2015) Incidence of fungal diseases in cocoa plantations in the eastern provinces of Cuba (in Spanish). <i>Rev. Protecci\u00f3n Veg.<\/i>, <b>30<\/b>, 87-96. https:\/\/censa.edicionescervantes.com\/index.php\/RPV\/article\/view\/572"},{"key":"27","unstructured":"Medina, T.L.F., L\u00f3pez, V.B.E., Valenzuela, C.E., Valenzuela, E.F.A., Romero, F.C.S., Ayala, A.Q.A., Lugo, G.G.A., and Sauceda, A.C.P. (2022) <i>Trichoderma spp. As an antagonist of phytopathogens of blueberry <\/i>(<i>Vaccinium corymbosum L.<\/i>). In Research in Agricultural Sciences. Scientific and technological development in sustainable agricultural production (in Spanish), (A.C. Carlos Enrique, M.B. Blanca. and G.J. Marisol., Ed.), pp. 607-613. Astra editorial, Mexico. https:\/\/www.researchgate.net\/publication\/368755831"},{"key":"28","unstructured":"Morel, M., Garc\u00eda, S., Castillo, Y., Moya, J.D., Rengifo, D., Reinoso, T., and Mart\u00ednez, N. (2021) Isolation and selection of native endophytic fungi with antagonistic potential to plant-parasitic nematodes in bananas in the provinces of Valverde and Montecristi (in Spanish). <i>APF.<\/i>, <b>10<\/b>, 11-24. https:\/\/sodiaf.org.do\/apf\/index.php\/apf\/article\/view\/126"},{"key":"29","doi-asserted-by":"publisher","unstructured":"Nwachukwu, B.C., Ayangbenro, A.S., and Babalola, O.O. (2021) Comparative study of microbial structure and functional profle of sunfower rhizosphere grown in two felds. <i>BMC Microbiology.<\/i>, <b>21<\/b>, 337. https:\/\/doi.org\/10.1186\/s12866-021-02397-7","DOI":"10.1186\/s12866-021-02397-7"},{"key":"30","doi-asserted-by":"crossref","unstructured":"Oliveira, L.S.M., Marra, L.M., Soares, B.L., Bomfeti, C.A., Da Silva, K., Ferreira, P.A.A., and De Souza, M.F.M. (2014) Bacteria isolated from soils of the western Amazon and from rehabilitated bauxite-mining areas have potential as plant growth promoters. <i>World J. Microbiol. Biotechnol.<\/i>, <b>30<\/b>, 1239-1250. https:\/\/doi.org\/10.1007\/ s11274-013-1547-2","DOI":"10.1007\/s11274-013-1547-2"},{"key":"31","doi-asserted-by":"publisher","unstructured":"P\u00e9rez-Corral, D.A., Ornelas-Paz, J.D.J., Olivas, G.I., Acosta-Mu\u00f1iz, C.H., Salas-Marina, M.A., Berlanga-Reyes, D.I., Sepulveda, D.R., Mares-Ponce de Le\u00f3n, Y., and R\u00edos-Velasco, C. (2022) Growth promotion of <i>Phaseolus vulgaris<\/i> and <i>Arabidopsis thaliana<\/i> seedlings by <i>Streptomycetes<\/i> volatile compounds. <i>Plants.<\/i>, <b>11<\/b>, 875. https:\/\/doi.org\/10.3390\/plants11070875","DOI":"10.3390\/plants11070875"},{"key":"32","doi-asserted-by":"publisher","unstructured":"Pinheiro, E.A.A., Pina, R.S.J., Feitosa, O.A., Carvalho, M.J., Borges, C.F., Marinho, S.B.P., and Marinho, M.R.A. (2017) Bioprospecting of antimicrobial activity of extracts of endophytic fungi from <i>Bauhinia guianensis<\/i>. <i>Rev. Argent. Microbiol.<\/i>, <b>49<\/b>, 3-6. https:\/\/doi.org\/10.1016\/j.ram.2016.08.005","DOI":"10.1016\/j.ram.2016.08.005"},{"key":"33","doi-asserted-by":"crossref","unstructured":"Posada, R.H., S\u00e1nchez de Prager, M., Hereida-Abarca, G., and Sieverding, E. (2016) Effects of soil physical and chemical parameters, and farm management practices on arbuscular mycorrhizal fungi communities and diversities in coffee plantations in Colombia and M\u00e9xico. <i>Agrofores. Syst.<\/i>, <b>92<\/b>, 555-574. https:\/\/doi.org\/10.10 07\/s10457-016-0030-0","DOI":"10.1007\/s10457-016-0030-0"},{"key":"34","doi-asserted-by":"publisher","unstructured":"Raeder, U., and Broda, P. (1985) Rapid DNA preparation from filamentous fungi. <i>Lett. of Appl. Microbiol.<\/i>, <b>1<\/b>, 17-20. https:\/\/doi.org\/10.1111\/j.1472-765X.1985.tb01479.x","DOI":"10.1111\/j.1472-765X.1985.tb01479.x"},{"key":"35","doi-asserted-by":"publisher","unstructured":"R\u00edos-Velasco, C., Caro-Cisneros, J.M., Berlanga-Reyes, D.I., Ru\u00edz-Cisneros, M.F., Ornelas-Paz, J.J., Salas-Marina, M.A., Villalobos, P.E., and Guerrero, P.V. (2016) Identification and antagonistic activity <i>in vitro<\/i> of <i>Bacillus<\/i> spp. and <i>Trichoderma<\/i> spp. isolates against common phytopathogenic fungi. <i>Rev. Mex. Fitopatol.<\/i>, <b>34<\/b>, 84-99. https:\/\/doi.org\/10.18781\/R.MEX.FIT.1507-1","DOI":"10.18781\/R.MEX.FIT.1507-1"},{"key":"36","doi-asserted-by":"crossref","unstructured":"Rodr\u00edguez, R.J., White Jr, J.F., Arnold, A.E. and Redman, R.S. (2009) Fungal endophytes: diversity and functional roles. <i>New Phytol.<\/i>, <b>182<\/b>, 314-330. https:\/\/doi.org\/10.1111\/j.1469-8137.2009.02773.x","DOI":"10.1111\/j.1469-8137.2009.02773.x"},{"key":"37","doi-asserted-by":"publisher","unstructured":"Ruiz-Cisneros, M.F., R\u00edos-Velasco, C., Berlanga-Reyes, D.I., Ornelas-Paz, J.J., Acosta-Mun\u0303iz, C.H., Romo-Chaco\u0301n A., Zamudio-Flores, P.B., Pe\u0301rez-Corral, D.A., Salas-Marina, M.A\u0301., Ibarra-Rendo\u0301n, J.E., and Ferna\u0301ndez-Pavi\u0301a, S.P. (2017) Incidence and causal agents of root diseases and its antagonists in apple orchards of Chihuahua, Me\u0301xico. <i>Rev. Mexic. Fitopatol<\/i>., <b>35<\/b>, 437-462. http:\/\/dx.doi.org\/10.18781\/R.MEX.FIT.1704-3","DOI":"10.18781\/R.MEX.FIT.1704-3"},{"key":"38","doi-asserted-by":"publisher","unstructured":"Shaffer, J.P., Sarmiento, C., Zalamea, P.C., Gallery, R.E., Davis, A.S., Baltrus, D.A., and Arnold A.E. (2016) Diversity, specificity, and phylogenetic relationships of endohyphal bacteria in fungi that inhabit tropical seeds and leaves. <i>Front Ecol Evol<\/i>., <b>4<\/b>, 116. doi: 10.3389\/fevo.2016.00116","DOI":"10.3389\/fevo.2016.00116"},{"key":"39","doi-asserted-by":"crossref","unstructured":"Salas-Marina, M.A., Silva-Flores, M.A., Uresti-Rivera, E.E., Castro-Longoria, E., Herrera-Estrella, A., and Casas-Flores, S. (2011) Colonization of <i>Arabidopsis <\/i>roots by <i>Trichoderma atroviride<\/i> promotes growth and enhances systemic disease resistance through jasmonic acid\/ethylene and salicylic acid pathways. <i>Eur. J. Plant Pathol.<\/i>, <b>131<\/b>, 15\u201326. https:\/\/doi.org\/10.1007\/s10658-0 11-9782-6","DOI":"10.1007\/s10658-011-9782-6"},{"key":"40","unstructured":"Salazar, L.A.M., and Ordo\u00f1ez, G.C.A. (2013) Isolation and identification of nitrogen-fixing actinomycetes in the soil of the botanical garden of the Technological University of Pereira (in Spanish). Bachelor thesis, Technological University of Pereira. https:\/\/hdl.handle.net\/11059\/3050"},{"key":"41","unstructured":"S\u00e1nchez, H.D. (2021) Bioprotection and biostimulation in tomato plants (<i>Solanum<\/i> <i>lycopersicum<\/i>) by inoculation with <i>Trichoderma<\/i> spp (in Spanish). Master\u00b4s thesis, Autonomous University of Quer\u00e9taro. http:\/\/ri-ng.uaq.mx\/handle\/123456789\/2680"},{"key":"42","doi-asserted-by":"crossref","unstructured":"Sanger, F., and Coulson, A.R. (1975) A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase. <i>J. Mol. Biol.<\/i>, <b>94<\/b>, 441-446. https:\/\/doi.org\/10.1016\/0022-2836(75)90213-2","DOI":"10.1016\/0022-2836(75)90213-2"},{"key":"43","doi-asserted-by":"crossref","unstructured":"Santoyo, G., Moreno-Hagelsieb, G., Orozco-Mosqueda, M.C., and Glick, R.B. (2016) Plant growth-promoting bacterial endophytes. <i>Microbiol. Res.<\/i>, <b>183<\/b>, 92-99. https:\/\/doi.org\/10.1016\/j.micres. 2015.11.008","DOI":"10.1016\/j.micres.2015.11.008"},{"key":"44","doi-asserted-by":"publisher","unstructured":"Saucedo-Garc\u00eda, A., Anaya, A.L., Espinosa-Garc\u00eda, F.J., and Gonz\u00e1lez, M.C. (2014) Diversity and Communities of Foliar Endophytic Fungi from Different Agroecosystems of <i>Coffea arabica <\/i>L. in Two Regions of Veracruz, Mexico. <i>Plos One.<\/i>, <b>9<\/b> (6), E98454. https:\/\/doi.org\/10.1371\/journal.pone.0098454","DOI":"10.1371\/journal.pone.0098454"},{"key":"45","doi-asserted-by":"publisher","unstructured":"Shekhar, N.C. (1999) An efficient microbiological growth medium for screening phosphate solubilizing microorganisms. <i>FEMS Microbiology Letters.<\/i>, <b>170<\/b>, 265-270. https:\/\/doi.org\/10.1016\/S0378-1097(98)00555-2","DOI":"10.1016\/S0378-1097(98)00555-2"},{"key":"46","doi-asserted-by":"publisher","unstructured":"Sollepura, B.R., Murali, N., Arkere, C.U., Siddapura, R.N., Ole, S.L., and Harischandra, S.P. (2020) Diversity, plant growth-promoting traits, and biocontrol potential of fungal endophytes of Sorghum bicolor. <i>Plant Pathol.<\/i>, <b>69<\/b>, 642-654. https:\/\/doi.org\/10.1111\/ppa.13151","DOI":"10.1111\/ppa.13151"},{"key":"47","unstructured":"Sol\u00eds, P.A.L. (2023) Endophytic fungi in coffee for the management of <i>Hemileia<\/i> <i>vastatrix<\/i> (BERK. &amp; BR.) from Soconusco, Chiapas (in Spanish). Master\u2019s thesis, Universidad Aut\u00f3noma Chapingo. https:\/\/repositorio.chapingo.edu.mx\/handle\/123456789\/2322"},{"key":"48","doi-asserted-by":"crossref","unstructured":"Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011) MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. <i>Molecular Biology and Evolution.<\/i>, 28, 2731-2739. https:\/\/doi.org\/10.1093\/molbev\/msr121","DOI":"10.1093\/molbev\/msr121"},{"key":"49","doi-asserted-by":"publisher","unstructured":"Tseng, Y.H., Rouina, H., Groten, K., Rajani, P., Furch, C.U.A., Reichelt, M., Baldwin, T.I., Nataraja, N.K., Shaanker, U.R., and Oelm\u00fcller, R. (2020) An endophytic <i>Trichoderma<\/i> strain promotes growth of its hosts and defends against pathogen attack<i>. Front. Plant Sci.<\/i>, <b>3<\/b>, 573-670. https:\/\/doi.org\/10.3389\/fpls.2020.573670","DOI":"10.3389\/fpls.2020.573670"},{"key":"50","doi-asserted-by":"crossref","unstructured":"Tyskiewicz, R., Nowak, A., Ozimek, E., and Jaroszuk-Sciset, J. (2022) <i>Trichoderma<\/i>: The current status of its application in agriculture for the biocontrol of fungal phytopathogens and stimulation of plant growth. <i>Int. J. Mol. Sci.<\/i>, <b>23<\/b>, 2329. https:\/\/doi.org\/10.33 90\/ijms23042329","DOI":"10.3390\/ijms23042329"},{"key":"51","doi-asserted-by":"publisher","unstructured":"Wang, H., Zhang, R., Duan, Y., Jiang, W., Chen, X., Shen, X., Yin, C., and Mao, Z. (2021) The Endophytic Strain <i>Trichoderma asperellum <\/i>6S-2: An Efficient Biocontrol Agent against Apple Replant Disease in China and a Potential Plant-Growth-Promoting Fungus. <i>J. Fungi.<\/i>, <b>7<\/b>, 1050. https:\/\/doi.org\/10.3390\/jof7121050","DOI":"10.3390\/jof7121050"},{"key":"52","doi-asserted-by":"crossref","unstructured":"Watanabe, T. (2002) Pictorial atlas of soil and seed fungi: Morphologies of cultured fungi and key to species. 3rd ed. CRC Press. Florida, EE.UU. https:\/\/doi.org\/10.1201\/EBK1439804193","DOI":"10.1201\/9781420040821"},{"key":"53","doi-asserted-by":"crossref","unstructured":"White, T.J., Bruns, T., Lee, S., and Taylor, J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR protocols: a guide to methods and applications (M.A. Innis, D.H. Gelfand, J.J. Sninsky. and T.J. White. Ed.), pp. 315-322. Academic Press, New York, USA.","DOI":"10.1016\/B978-0-12-372180-8.50042-1"},{"key":"54","doi-asserted-by":"crossref","unstructured":"Zarza, E., Lop\u00e9z-Pastrana, A., Damon, A., Guill\u00e9n-Navarro, K., and Garc\u00eda-Fajardo, L.V. (2022). Fungal diversity in shade-coffee plantations in Soconusco, Mexico. <i>PeerJ.<\/i>, 1-23. https:\/\/doi.org\/10.77 17\/peerj.13610","DOI":"10.7717\/peerj.13610"}],"container-title":["Journal of Microorganism Control"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.jstage.jst.go.jp\/article\/jmc\/31\/3\/31_105\/_pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,9,12]],"date-time":"2026-09-12T04:45:43Z","timestamp":1789188343000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.jstage.jst.go.jp\/article\/jmc\/31\/3\/31_105\/_article"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026]]},"references-count":55,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2026]]}},"URL":"https:\/\/doi.org\/10.4265\/jmc.31.3_105","relation":{},"ISSN":["2758-6383","2758-6391"],"issn-type":[{"value":"2758-6383","type":"print"},{"value":"2758-6391","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026]]}}}