{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,13]],"date-time":"2026-01-13T00:22:27Z","timestamp":1768263747799,"version":"3.49.0"},"reference-count":9,"publisher":"Naturalis Historia Publishing","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"abstract":"<jats:p>The Russian desman (<jats:italic>Desmana moschata<\/jats:italic>) is a rare member of the Desmaninae subfamily, displaying a semi-aquatic lifestyle. We assembled the whole genome of this species using Illumina, a short-read sequencing approach. The whole genome sequencing outputs were assembled using the Abyss2 <jats:italic>de novo<\/jats:italic> approach. The raw data and assembled genome are publicly available via European Nucleotide Archive: (ERR13337211 and GCA_965120235, respectively).<\/jats:p>","DOI":"10.56179\/001c.129602","type":"journal-article","created":{"date-parts":[[2025,2,14]],"date-time":"2025-02-14T15:28:06Z","timestamp":1739546886000},"source":"Crossref","is-referenced-by-count":3,"title":["The Complete Genome Sequence of <i>Desmana moschata<\/i>, the Russian desman"],"prefix":"10.56179","author":[{"given":"Sara","family":"Sampaio","sequence":"first","affiliation":[{"name":"University of Porto","department":["CIBIO\/InBIO, Research Center in Biodiversity and Genetic Resources"]},{"name":"University of Porto","department":["Department of Biology"]},{"name":"Campus de Vair\u00e3o","department":["Program in Genomics, Biodiversity and Land Planning"]}]},{"given":"Andr\u00e9","family":"Gomes-dos-Santos","sequence":"additional","affiliation":[{"name":"University of Porto","department":["Interdisciplinary Centre of Marine and Environmental Research"]}]},{"given":"Elsa","family":"Froufe","sequence":"additional","affiliation":[{"name":"University of Porto","department":["Interdisciplinary Centre of Marine and Environmental Research"]}]},{"given":"Ivan N.","family":"Bolotov","sequence":"additional","affiliation":[{"name":"N. Laverov Federal Center for Integrated Arctic Research of the Ural Branch of the Russian Academy of Sciences"}]},{"given":"Viatcheslav V.","family":"Rozhnov","sequence":"additional","affiliation":[{"name":"A. N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences"}]},{"given":"Marina V.","family":"Rutovskaya","sequence":"additional","affiliation":[{"name":"A. N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences"}]},{"given":"Ilia G.","family":"Meschersky","sequence":"additional","affiliation":[{"name":"A. N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences"}]},{"given":"Paulo C.","family":"Alves","sequence":"additional","affiliation":[{"name":"University of Porto","department":["Department of Biology"]},{"name":"Campus de Vair\u00e3o","department":["Program in Genomics, Biodiversity and Land Planning"]},{"name":"University of Porto","department":["Research Center in Biodiversity and Genetic Resources"]},{"name":"Biological Station of M\u00e9rtola"}]},{"given":"L. Filipe C.","family":"Castro","sequence":"additional","affiliation":[{"name":"University of Porto","department":["Department of Biology"]},{"name":"University of Porto","department":["Interdisciplinary Centre of Marine and Environmental Research"]}]},{"given":"Manuel","family":"Lopes-Lima","sequence":"additional","affiliation":[{"name":"University of Porto","department":["Department of Biology"]},{"name":"Campus de Vair\u00e3o","department":["Program in Genomics, Biodiversity and Land Planning"]},{"name":"University of Porto","department":["Research Center in Biodiversity and Genetic Resources"]}]}],"member":"35248","published-online":{"date-parts":[[2025,2,13]]},"reference":[{"issue":"15","key":"ref1","doi-asserted-by":"publisher","first-page":"2114","DOI":"10.1093\/bioinformatics\/btu170","article-title":"Trimmomatic: a flexible trimmer for Illumina sequence data","volume":"30","author":"A. M. Bolger","year":"2014","journal-title":"Bioinformatics"},{"issue":"1","key":"ref2","doi-asserted-by":"publisher","first-page":"31","DOI":"10.1093\/bioinformatics\/btt310","article-title":"Informed and automated k -mer size selection for genome assembly","volume":"30","author":"R. Chikhi","year":"2014","journal-title":"Bioinformatics"},{"issue":"5","key":"ref3","doi-asserted-by":"publisher","first-page":"768","DOI":"10.1101\/gr.214346.116","article-title":"ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter","volume":"27","author":"S. D. Jackman","year":"2017","journal-title":"Genome Research"},{"issue":"16","key":"ref4","doi-asserted-by":"publisher","first-page":"8958","DOI":"10.1073\/pnas.1917836117","article-title":"Convergent evolution of olfactory and thermoregulatory capacities in small amphibious mammals","volume":"117","author":"Q. Martinez","year":"2020","journal-title":"Proceedings of the National Academy of Sciences"},{"key":"ref5","series-title":"Enciclopedia Virtual de los Vertebrados Espa\u00f1oles","article-title":"Desm\u00e1n ib\u00e9rico \u2013 <i>Galemys pyrenaicus<\/i>","author":"C. Nores","year":"2007"},{"key":"ref6","article-title":"<i>Galemys pyrenaicus<\/i>.","author":"L. Quaglietta","year":"2024","journal-title":"The IUCN Red List of Threatened Species 2024"},{"key":"ref7","article-title":"<i>Desmana moschata<\/i>.","author":"M. Rutovskaya","year":"2023","journal-title":"The IUCN Red List of Threatened Species 2023"},{"issue":"2","key":"ref8","doi-asserted-by":"publisher","first-page":"36","DOI":"10.24189\/ncr.2020.011","article-title":"Habitat conditions of <i>Desmana moschata<\/i> (Talpidae, Eulipotyphla, Mammalia) in the buffer zone of the Prisurskiy State Nature Reserve (Russia)","volume":"5","author":"M. V. Rutovskaya","year":"2020","journal-title":"Nature Conservation Research"},{"key":"ref9","series-title":"Handbook of the Mammals of the World","first-page":"709","article-title":"Insectivores, Sloths and Colugos","volume":"8","author":"D. E. 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