{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,23]],"date-time":"2025-10-23T00:55:16Z","timestamp":1761180916034,"version":"build-2065373602"},"reference-count":10,"publisher":"Naturalis Historia Publishing","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"abstract":"<jats:p>\n                    We present the first genome assembly of the recently described deep-sea spiny eel,\n                    <jats:italic>Notacanthus arrontei<\/jats:italic>\n                    (Notacanthiformes: Notacanthidae). The whole genome was assembled using Illumina short-read sequencing approaches. The raw data and assembled genome are publicly available under the NCBI Accession Number JBQVWD000000000 under BioProject Accession PRJNA1294845.\n                  <\/jats:p>","DOI":"10.56179\/001c.144906","type":"journal-article","created":{"date-parts":[[2025,10,22]],"date-time":"2025-10-22T16:09:09Z","timestamp":1761149349000},"source":"Crossref","is-referenced-by-count":0,"title":["First genome of a deep-sea notacanthid fish,\n                    <i>Notacanthus arrontei<\/i>\n                    (Notacanthiformes; Notacanthidae)"],"prefix":"10.56179","author":[{"given":"David","family":"Barros-Garc\u00eda","sequence":"first","affiliation":[{"name":"University of Porto, Terminal de Cruzeiros do Porto de Leix\u00f5es, 4450-208 Matosinhos, Portugal.","department":["CIIMAR\/CIMAR LA, Interdisciplinary Centre of Marine and Environmental Research"]}]},{"given":"Andr\u00e9 M.","family":"Machado","sequence":"additional","affiliation":[{"name":"University of Porto, Terminal de Cruzeiros do Porto de Leix\u00f5es, 4450-208 Matosinhos, Portugal.","department":["CIIMAR\/CIMAR LA, Interdisciplinary Centre of Marine and Environmental Research"]},{"name":"University of Porto (U. Porto), Rua do Campo Alegre, Porto, Portugal.","department":["FCUP - Department of Biology, Faculty of Sciences"]}]},{"given":"Juan Carlos","family":"Arronte","sequence":"additional","affiliation":[{"name":"Santander Oceanographic Centre (COST-IEO), CSIC, Severiano Ballesteros 16, 39004 Santander, Spain.","department":["Spanish Institute of Oceanography"]}]},{"given":"Andr\u00e9","family":"Gomes-dos-Santos","sequence":"additional","affiliation":[{"name":"University of Porto, Terminal de Cruzeiros do Porto de Leix\u00f5es, 4450-208 Matosinhos, Portugal.","department":["CIIMAR\/CIMAR LA, Interdisciplinary Centre of Marine and Environmental Research"]}]},{"given":"L. Filipe C.","family":"Castro","sequence":"additional","affiliation":[{"name":"University of Porto, Terminal de Cruzeiros do Porto de Leix\u00f5es, 4450-208 Matosinhos, Portugal.","department":["CIIMAR\/CIMAR LA, Interdisciplinary Centre of Marine and Environmental Research"]},{"name":"University of Porto, 4169-007 Porto, Portugal.","department":["Department of Biology, Faculty of Sciences"]}]},{"given":"Elsa","family":"Froufe","sequence":"additional","affiliation":[{"name":"University of Porto, Terminal de Cruzeiros do Porto de Leix\u00f5es, 4450-208 Matosinhos, Portugal.","department":["CIIMAR\/CIMAR LA, Interdisciplinary Centre of Marine and Environmental Research"]},{"name":"University of Porto, Laboratory of Cytogenetics","department":["ICBAS - School of Medicine and Biomedical Sciences"]}]}],"member":"35248","published-online":{"date-parts":[[2025,10,21]]},"reference":[{"issue":"6","key":"ref1","doi-asserted-by":"publisher","first-page":"1910","DOI":"10.1111\/jfb.15734","article-title":"Unveiling taxonomic diversity in the deep-sea fish genus <i>Notacanthus<\/i> (Notacanthiformes: Notacanthidae) with description of <i>Notacanthus arrontei<\/i> n. sp.","volume":"104","author":"R. Ba\u00f1\u00f3n","year":"2024","journal-title":"J. Fish Biol"},{"issue":"15","key":"ref2","doi-asserted-by":"publisher","first-page":"2114","DOI":"10.1093\/bioinformatics\/btu170","article-title":"Trimmomatic: a flexible trimmer for Illumina sequence data","volume":"30","author":"A. M. Bolger","year":"2014","journal-title":"Bioinformatics"},{"key":"ref3","doi-asserted-by":"publisher","first-page":"665","DOI":"10.1017\/S0025315402006033","article-title":"Feeding strategies of <i>Polyacanthonotus rissoanus<\/i> (Pisces: Notacanthidae) in the deep western Mediterranean","volume":"82","author":"M. 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Devine","year":"2006","journal-title":"Nature"},{"key":"ref7","doi-asserted-by":"publisher","first-page":"101182","DOI":"10.1016\/j.margen.2025.101182","article-title":"A \"light in the darkness\": First transcriptomic data from deep-sea spiny eels (Notacanthidae)","volume":"80","author":"A. Gomes-dos-Santos","year":"2025","journal-title":"Marine Genomics"},{"issue":"1","key":"ref8","doi-asserted-by":"publisher","first-page":"18","DOI":"10.1186\/2047-217X-1-18","article-title":"SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler","volume":"1","author":"R. Luo","year":"2012","journal-title":"GigaScience"},{"key":"ref9","article-title":"Fishes of the world","author":"J. S. Nelson","year":"2016","edition":"5"},{"key":"ref10","doi-asserted-by":"publisher","first-page":"890","DOI":"10.1134\/S0032945216060102","article-title":"First data on the age, growth processes, and otoliths of snub-nosed spiny eel <i>Notacanthus chemnitzii<\/i> (Notacanthidae)","volume":"56","author":"E. V. Vedishcheva","year":"2016","journal-title":"Journal of Ichthyology"}],"container-title":["Biodiversity Genomes"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/biodiversitygenomes.scholasticahq.com\/article\/144906-first-genome-of-a-deep-sea-notacanthid-fish-_notacanthus-arrontei_-notacanthiformes-notacanthidae","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,22]],"date-time":"2025-10-22T16:09:09Z","timestamp":1761149349000},"score":1,"resource":{"primary":{"URL":"https:\/\/biodiversitygenomes.scholasticahq.com\/article\/144906-first-genome-of-a-deep-sea-notacanthid-fish-_notacanthus-arrontei_-notacanthiformes-notacanthidae"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,10,21]]},"references-count":10,"URL":"https:\/\/doi.org\/10.56179\/001c.144906","relation":{},"ISSN":["2687-7945"],"issn-type":[{"value":"2687-7945","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,10,21]]}}}