{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,22]],"date-time":"2026-09-22T03:17:47Z","timestamp":1790047067870,"version":"4.0.1"},"reference-count":114,"publisher":"MathDoc\/Centre Mersenne","issue":"G1","license":[{"start":{"date-parts":[[2025,6,11]],"date-time":"2025-06-11T00:00:00Z","timestamp":1749600000000},"content-version":"unspecified","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"abstract":"<jats:p>\n                    Endosymbionts are very common in nature, offering multiple occasions to recapitulate events that have led to the generation of mitochondria and plastids. However, both these organelles are unique because they are thought to derive from two individual events that gave rise to all eukaryotes and the plastids in algae and plants (excluding\n                    <jats:italic>Paulinella chromatophora<\/jats:italic>\n                    ), respectively. This review focuses on the differences and similarities existing between extant endosymbionts and the two major endosymbiont derived organelles: the mitochondria and plastids. Emphasis is put on recent developments that point to the major role of intracellular pathogens in the establishment of these organelles. We argue that metabolic integration of bacterial endosymbionts into mitochondria and plastids required an unusually high degree of preadaptation not shared by most extant endosymbionts. We propose that this was achieved by either recruiting intracellular bacterial pathogens as \u201chelper genomes\u201d providing needed gene products, or by selecting endosymbionts destined to become organelles directly from such obligate intracellular bacteria.\n                  <\/jats:p>","DOI":"10.5802\/crbiol.176","type":"journal-article","created":{"date-parts":[[2025,6,11]],"date-time":"2025-06-11T03:18:21Z","timestamp":1749611901000},"page":"107-135","source":"Crossref","is-referenced-by-count":1,"title":["Obligate intracellular bacterial pathogens as major players in the metabolic integration of organelles"],"prefix":"10.5802","volume":"348","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1629-1650","authenticated-orcid":false,"given":"Steven","family":"Ball","sequence":"first","affiliation":[{"name":"Unit\u00e9 de Glycobiologie Structurale et Fonctionnelle UMR8576 CNRS\/Universit\u00e9 de Lille, B\u00e2timent C9, Cit\u00e9 Scientifique, 59655 Villeneuve d\u2019Ascq, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2388-6185","authenticated-orcid":false,"given":"Denis","family":"Baurain","sequence":"additional","affiliation":[{"name":"Laboratoire de Phylog\u00e9nomique des Eucaryotes B\u00e2t. B22 Quartier Vall\u00e9e 1 chemin de la Vall\u00e9e 4, 4000 Li\u00e8ge 1, Belgium"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0008-1446-665X","authenticated-orcid":false,"given":"Marie","family":"Leleu","sequence":"additional","affiliation":[{"name":"Laboratoire de Phylog\u00e9nomique des Eucaryotes B\u00e2t. B22 Quartier Vall\u00e9e 1 chemin de la Vall\u00e9e 4, 4000 Li\u00e8ge 1, Belgium"},{"name":"Unit\u00e9 de Glycobiologie Structurale et Fonctionnelle UMR8576 CNRS\/Universit\u00e9 de Lille, B\u00e2timent C9, Cit\u00e9 Scientifique, 59655 Villeneuve d\u2019Ascq, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4544-8055","authenticated-orcid":false,"given":"Ingrid","family":"Lafontaine","sequence":"additional","affiliation":[{"name":"Unit\u00e9 de Biologie du chloroplaste et perception de la lumi\u00e8re chez les micro-algues UMR7141 CNRS\/Sorbonne Universit\u00e9, Institut de Biologie Physico-Chimique, 13, rue Pierre et Marie Curie, 75005 Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9725-9833","authenticated-orcid":false,"given":"Ugo","family":"Cenci","sequence":"additional","affiliation":[{"name":"Unit\u00e9 de Glycobiologie Structurale et Fonctionnelle UMR8576 CNRS\/Universit\u00e9 de Lille, B\u00e2timent C9, Cit\u00e9 Scientifique, 59655 Villeneuve d\u2019Ascq, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6534-6120","authenticated-orcid":false,"given":"Christophe","family":"Colleoni","sequence":"additional","affiliation":[{"name":"Unit\u00e9 de Glycobiologie Structurale et Fonctionnelle UMR8576 CNRS\/Universit\u00e9 de Lille, B\u00e2timent C9, Cit\u00e9 Scientifique, 59655 Villeneuve d\u2019Ascq, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8827-4927","authenticated-orcid":false,"given":"Olivier","family":"Vallon","sequence":"additional","affiliation":[{"name":"Unit\u00e9 de Biologie du chloroplaste et perception de la lumi\u00e8re chez les micro-algues UMR7141 CNRS\/Sorbonne Universit\u00e9, Institut de Biologie Physico-Chimique, 13, rue Pierre et Marie Curie, 75005 Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9529-3317","authenticated-orcid":false,"given":"Gilbert","family":"Greub","sequence":"additional","affiliation":[{"name":"Institut de microbiologie de l\u2019Universit\u00e9 de Lausanne, D\u00e9partement des laboratoires Bureau IMUL 02-222, Bugnon 48, CH-1011 Lausanne, Switzerland"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0970-4672","authenticated-orcid":false,"given":"Andreas","family":"Weber","sequence":"additional","affiliation":[{"name":"Institute for Plant Biochemistry, Heinrich-Heine-University, Geb. 26.14.02, Room 106, Universitaetsstrasse 1, D-40225 Duesseldorf, Germany"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0611-1273","authenticated-orcid":false,"given":"Debashish","family":"Bhattacharya","sequence":"additional","affiliation":[{"name":"Department of Biochemistry and Microbiology, Rutgers, The State University of New Jersey, Foran Hall, Room 102, 59 Dudley Road, New Brunswick, NJ 08901-8520, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"3842","published-online":{"date-parts":[[2025,6,11]]},"reference":[{"key":"key2025121113373263593_1","doi-asserted-by":"publisher","first-page":"2","DOI":"10.1016\/0027-5107(64)90047-8","article-title":"The relation of recombination to mutational advance","volume":"106","author":"Muller, H. 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Recombination and the maintenance of plant organelle genome stability, New Phytol., Volume 186 (2010) no. 2, 43, pp. 299-317","journal-title":"New Phytol."},{"issue":"3","key":"key2025121113373263593_6","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.02057-15","article-title":"Defying Muller\u2019s ratchet: ancient heritable endobacteria escape extinction through retention of recombination and genome plasticity","volume":"7","author":"Naito, M.","year":"2016","unstructured":"[6] Naito, M.; Pawlowska, T. E. Defying Muller\u2019s ratchet: ancient heritable endobacteria escape extinction through retention of recombination and genome plasticity, mBio, Volume 7 (2016) no. 3, e02057-15","journal-title":"mBio"},{"issue":"1","key":"key2025121113373263593_7","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-024-54047-x","article-title":"Genetic potential for aerobic respiration and denitrification in globally distributed respiratory endosymbionts","volume":"15","author":"Speth, D. 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Peptidoglycan production by an insect-bacterial mosaic, Cell, Volume 179 (2019) no. 3, 703-712.e7","journal-title":"Cell"},{"issue":"14","key":"key2025121113373263593_9","doi-asserted-by":"publisher","first-page":"R640","DOI":"10.1016\/j.cub.2014.06.038","article-title":"Aphid gene of bacterial origin encodes a protein transported to an obligate endosymbiont","volume":"24","author":"Nakabachi, A.","year":"2014","unstructured":"[9] Nakabachi, A.; Ishida, K.; Hongoh, Y.; Ohkuma, M.; Miyagishima, S.-Y. Aphid gene of bacterial origin encodes a protein transported to an obligate endosymbiont, Curr. Biol., Volume 24 (2014) no. 14, p. R640-R641","journal-title":"Curr. Biol."},{"issue":"6692","key":"key2025121113373263593_10","doi-asserted-by":"publisher","first-page":"217","DOI":"10.1126\/science.adk1075","article-title":"Nitrogen-fixing organelle in a marine alga","volume":"384","author":"Coale, T. H.","year":"2024","unstructured":"[10] Coale, T. H.; Loconte, V.; Turk-Kubo, K. A. et al. 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M.","year":"2015","unstructured":"[12] Archibald, J. M. Endosymbiosis and eukaryotic cell evolution, Curr. Biol., Volume 25 (2015) no. 19, p. R911-R921","journal-title":"Curr. Biol."},{"issue":"4","key":"key2025121113373263593_13","doi-asserted-by":"publisher","DOI":"10.1101\/cshperspect.a016105","article-title":"Origin and evolution of plastids and photosynthesis in eukaryotes","volume":"6","author":"McFadden, G. I.","year":"2014","unstructured":"[13] McFadden, G. I. Origin and evolution of plastids and photosynthesis in eukaryotes, Cold Spring Harb. Perspect. Biol., Volume 6 (2014) no. 4, a016105","journal-title":"Cold Spring Harb. Perspect. Biol."},{"issue":"2","key":"key2025121113373263593_14","doi-asserted-by":"publisher","first-page":"618","DOI":"10.1111\/nph.15965","article-title":"Horizontal and endosymbiotic gene transfer in early plastid evolution","volume":"224","author":"Ponce-Toledo, R. I.","year":"2019","unstructured":"[14] Ponce-Toledo, R. I.; L\u00f3pez-Garc\u00eda, P.; Moreira, D. Horizontal and endosymbiotic gene transfer in early plastid evolution, New Phytol., Volume 224 (2019) no. 2, 17, pp. 618-624","journal-title":"New Phytol."},{"issue":"5","key":"key2025121113373263593_15","doi-asserted-by":"publisher","first-page":"1693","DOI":"10.1111\/nph.17478","article-title":"Why is primary endosymbiosis so rare?","volume":"231","author":"Stephens, T. G.","year":"2021","unstructured":"[15] Stephens, T. G.; Gabr, A.; Calatrava, V.; Grossman, A. R.; Bhattacharya, D. Why is primary endosymbiosis so rare?, New Phytol., Volume 231 (2021) no. 5, pp. 1693-1699","journal-title":"New Phytol."},{"issue":"6671","key":"key2025121113373263593_16","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1038\/32096","article-title":"The hydrogen hypothesis for the first eukaryote","volume":"392","author":"Martin, W.","year":"1998","unstructured":"[16] Martin, W.; M\u00fcller, M. The hydrogen hypothesis for the first eukaryote, Nature, Volume 392 (1998) no. 6671, 703-712.e7, pp. 37-41","journal-title":"Nature"},{"issue":"1","key":"key2025121113373263593_17","doi-asserted-by":"publisher","first-page":"31","DOI":"10.1093\/gbe\/evs117","article-title":"Genomes of stigonematalean cyanobacteria (Subsection V) and the evolution of oxygenic photosynthesis from Prokaryotes to Plastids","volume":"5","author":"Dagan, T.","year":"2013","unstructured":"[17] Dagan, T.; Roettger, M.; Stucken, K. et al. Genomes of stigonematalean cyanobacteria (Subsection V) and the evolution of oxygenic photosynthesis from Prokaryotes to Plastids, Genome Biol. Evol., Volume 5 (2013) no. 1, e22054, pp. 31-44","journal-title":"Genome Biol. 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Nitrogen-fixing organelle in a marine alga, Science, Volume 384 (2024) no. 6692, pp. 217-222 (Epub April 11, 2024. PMID: 38603509)","journal-title":"Science"},{"key":"key2025121113373263593_22","doi-asserted-by":"publisher","DOI":"10.3389\/fphys.2023.1213866","article-title":"The journey of preproteins across the chloroplast membrane systems","volume":"14","author":"Ballabani, G.","year":"2023","unstructured":"[22] Ballabani, G.; Forough, M.; Kessler, F.; Shanmugabalaji, V. The journey of preproteins across the chloroplast membrane systems, Front. Physiol., Volume 14 (2023), 1213866","journal-title":"Front. Physiol."},{"issue":"2","key":"key2025121113373263593_23","doi-asserted-by":"publisher","first-page":"332","DOI":"10.1016\/j.bbamcr.2012.03.019","article-title":"Molecular chaperone involvement in chloroplast protein import","volume":"1833","author":"Flores-P\u00e9rez, \u00da.","year":"2013","unstructured":"[23] Flores-P\u00e9rez, \u00da.; Jarvis, P. 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