{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,7,2]],"date-time":"2025-07-02T05:47:46Z","timestamp":1751435266578,"version":"3.37.3"},"reference-count":29,"publisher":"Korea Genome Organization","issue":"3","license":[{"start":{"date-parts":[[2021,9,30]],"date-time":"2021-09-30T00:00:00Z","timestamp":1632960000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"Ministry of SMEs and Startups\u2019 2018 technology development project to foster regional key industries","award":["P0002726"],"award-info":[{"award-number":["P0002726"]}]}],"content-domain":{"domain":["genominfo.org"],"crossmark-restriction":true},"short-container-title":["Genomics Inform"],"published-print":{"date-parts":[[2021,9,30]]},"abstract":"<jats:p>Semisulcospira libertina, a species of freshwater snail, is widespread in East Asia. It is important as a food source. Additionally, it is a vector of clonorchiasis, paragonimiasis, metagonimiasis, and other parasites. Although S. libertina has ecological, commercial, and clinical importance, its whole-genome has not been reported yet. Here, we revealed the genome of S. libertina through de novo assembly. We assembled the whole-genome of S. libertina and determined its transcriptome for the first time using Illumina NovaSeq 6000 platform. According to the k-mer analysis, the genome size of S. libertina was estimated to be 3.04 Gb. Using RepeatMasker, a total of 53.68% of repeats were identified in the genome assembly. Genome data of S. libertina reported in this study will be useful for identification and conservation of S. libertina in East Asia.<\/jats:p>","DOI":"10.5808\/gi.21039","type":"journal-article","created":{"date-parts":[[2021,9,30]],"date-time":"2021-09-30T05:45:08Z","timestamp":1632980708000},"page":"e32","update-policy":"https:\/\/doi.org\/10.5808\/crossmark_policy","source":"Crossref","is-referenced-by-count":3,"title":["Draft genome of Semisulcospira libertina, a species of freshwater snail"],"prefix":"10.5808","volume":"19","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-7292-2520","authenticated-orcid":true,"given":"Jeong-An","family":"Gim","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8445-3773","authenticated-orcid":true,"given":"Kyung-Wan","family":"Baek","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8571-2722","authenticated-orcid":true,"given":"Young-Sool","family":"Hah","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1798-4360","authenticated-orcid":true,"given":"Ho Jin","family":"Choo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8829-5138","authenticated-orcid":true,"given":"Ji-Seok","family":"Kim","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3575-4123","authenticated-orcid":true,"given":"Jun-Il","family":"Yoo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"3815","reference":[{"key":"ref1","doi-asserted-by":"publisher","DOI":"10.3109\/24701394.2016.1149823"},{"key":"ref2","doi-asserted-by":"publisher","DOI":"10.1007\/s11033-014-3238-y"},{"key":"ref3","doi-asserted-by":"publisher","DOI":"10.1016\/j.ympev.2007.02.018"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.3109\/19401736.2013.861449"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1080\/23802359.2018.1443030"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijbiomac.2019.06.036"},{"key":"ref7","first-page":"15451","volume-title":"Whole genome analysis of a schistosomiasis-transmitting freshwater snail","author":"Adema","year":"2017"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1038\/nature11696"},{"key":"ref9","first-page":"1","volume-title":"Genome sequence of pacific abalone (<italic>Haliotis discus hannai<\/italic>): the first draft genome in family Haliotidae","author":"Nam","year":"2017"},{"key":"ref10","first-page":"585","volume-title":"An annotated draft genome for <italic>Radix auricularia<\/italic> (Gastropoda, Mollusca)","author":"Schell","year":"2017"},{"key":"ref11","doi-asserted-by":"publisher","DOI":"10.1007\/s00438-015-1119-2"},{"key":"ref12","first-page":"18","volume-title":"SOAPdenovo2: an empirically improved memory-efficient short-read <italic>de novo<\/italic> assembler","author":"Luo","year":"2012"},{"key":"ref13","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv351"},{"volume-title":"","year":"2015","author":"Smit","key":"ref14"},{"key":"ref15","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkw413"},{"key":"ref16","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btt509"},{"volume-title":"","year":"2014","author":"Altschul","key":"ref17"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts635"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv661"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gki458"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1002\/0471250953.bi0207s21"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msy096"},{"key":"ref23","first-page":"512","volume-title":"Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees","author":"Tamura","year":"1993"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1101\/gr.170720.113"},{"key":"ref25","first-page":"160","volume-title":"Gene expression correlated with delay in shell formation in larval Pacific oysters (<italic>Crassostrea gigas<\/italic>) exposed to experimental ocean acidification provides insights into shell formation mechanisms","author":"De Wit","year":"2018"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1038\/nature11413"},{"key":"ref27","first-page":"949","volume-title":"The draft genome of an octocoral, <italic>Dendronephthya gigantea<\/italic>","author":"Jeon","year":"2019"},{"key":"ref28","doi-asserted-by":"publisher","DOI":"10.1093\/gbe\/evx096"},{"key":"ref29","doi-asserted-by":"publisher","DOI":"10.1007\/s00227-021-03826-x"}],"container-title":["Genomics &amp; 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