{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,23]],"date-time":"2026-10-23T01:20:07Z","timestamp":1792718407671,"version":"4.5.0"},"reference-count":70,"publisher":"eLife Sciences Publications, Ltd","license":[{"start":{"date-parts":[[2023,7,3]],"date-time":"2023-07-03T00:00:00Z","timestamp":1688342400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2023,7,3]],"date-time":"2023-07-03T00:00:00Z","timestamp":1688342400000},"content-version":"am","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2023,7,3]],"date-time":"2023-07-03T00:00:00Z","timestamp":1688342400000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"publisher","award":["CRC 1182 \"Origin and Function of Metaorganisms\""],"award-info":[{"award-number":["CRC 1182 \"Origin and Function of Metaorganisms\""]}],"id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"publisher","award":["Project-ID 434434223 CRC 1461 \"Neurotronics: Bio-Inspired Information Pathways\""],"award-info":[{"award-number":["Project-ID 434434223 CRC 1461 \"Neurotronics: Bio-Inspired Information Pathways\""]}],"id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["grant 1 R01 HL 15362201-A"],"award-info":[{"award-number":["grant 1 R01 HL 15362201-A"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["INSPIRE grant 1608744"],"award-info":[{"award-number":["INSPIRE grant 1608744"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000001","name":"National Science Foundation","doi-asserted-by":"publisher","award":["RAISE grant"],"award-info":[{"award-number":["RAISE grant"]}],"id":[{"id":"10.13039\/100000001","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"publisher","award":["KL3475\/2-1"],"award-info":[{"award-number":["KL3475\/2-1"]}],"id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elifesciences.org"],"crossmark-restriction":false},"short-container-title":[],"accepted":{"date-parts":[[2023,6,30]]},"abstract":"<jats:p>\n                    The freshwater polyp\n                    <jats:italic>Hydra<\/jats:italic>\n                    is a popular biological model system; however, we still do not understand one of its most salient behaviors, the generation of spontaneous body wall contractions. Here, by applying experimental fluid dynamics analysis and mathematical modeling, we provide functional evidence that spontaneous contractions of body walls enhance the transport of chemical compounds from and to the tissue surface where symbiotic bacteria reside. Experimentally, a reduction in the frequency of spontaneous body wall contractions is associated with a changed composition of the colonizing microbiota. Together, our findings suggest that spontaneous body wall contractions create an important fluid transport mechanism that (1) may shape and stabilize specific host\u2013microbe associations and (2) create fluid microhabitats that may modulate the spatial distribution of the colonizing microbes. This mechanism may be more broadly applicable to animal\u2013microbe interactions since research has shown that rhythmic spontaneous contractions in the gastrointestinal tracts are essential for maintaining normal microbiota.\n                  <\/jats:p>","DOI":"10.7554\/elife.83637","type":"journal-article","created":{"date-parts":[[2023,7,3]],"date-time":"2023-07-03T11:25:17Z","timestamp":1688383517000},"update-policy":"https:\/\/doi.org\/10.7554\/elife.83637","source":"Crossref","is-referenced-by-count":7,"title":["Spontaneous body wall contractions stabilize the fluid microenvironment that shapes host\u2013microbe associations"],"prefix":"10.7554","volume":"12","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1898-3968","authenticated-orcid":true,"given":"Janna C","family":"Nawroth","sequence":"first","affiliation":[{"id":[{"id":"https:\/\/ror.org\/03taz7m60","id-type":"ROR","asserted-by":"publisher"}],"name":"Aerospace and Mechanical Engineering, University of Southern California","place":["Los Angeles, United States"]},{"name":"Helmholtz Pioneer Campus and Institute of Biological and Medical Imaging (IBMI), Helmholtz Munich (GmbH)","place":["Neuherberg, Germany"]},{"id":[{"id":"https:\/\/ror.org\/02kkvpp62","id-type":"ROR","asserted-by":"publisher"}],"name":"Chair of Biological Imaging at the Central Institute for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich","place":["Munich, Germany"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8101-6498","authenticated-orcid":true,"given":"Christoph","family":"Giez","sequence":"first","affiliation":[{"id":[{"id":"https:\/\/ror.org\/04v76ef78","id-type":"ROR","asserted-by":"publisher"}],"name":"Zoological Institute, Kiel University","place":["Kiel, Germany"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1764-0613","authenticated-orcid":true,"given":"Alexander","family":"Klimovich","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/04v76ef78","id-type":"ROR","asserted-by":"publisher"}],"name":"Zoological Institute, Kiel University","place":["Kiel, Germany"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0336-585X","authenticated-orcid":true,"given":"Eva","family":"Kanso","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/03taz7m60","id-type":"ROR","asserted-by":"publisher"}],"name":"Aerospace and Mechanical Engineering, University of Southern California","place":["Los Angeles, United States"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9488-5545","authenticated-orcid":true,"given":"Thomas CG","family":"Bosch","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/04v76ef78","id-type":"ROR","asserted-by":"publisher"}],"name":"Zoological Institute, Kiel University","place":["Kiel, Germany"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"4374","published-online":{"date-parts":[[2023,7,3]]},"reference":[{"key":"bib1","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-017-00625-1","article-title":"A secreted antibacterial neuropeptide shapes the microbiome of hydra","volume":"8","author":"Augustin","year":"2017","journal-title":"Nature Communications"},{"key":"bib2","doi-asserted-by":"publisher","first-page":"1","DOI":"10.5962\/bhl.title.64073","article-title":"M\u00e9moires pour Servir \u00c0 L\u2019Histoire d\u2019un genre de Polypes D\u2019Eau Douce, \u00c0 Bras en forme de Cornes","volume":"1","author":"Bayer","year":"1744","journal-title":"Memoire Sur Le Polypes"},{"key":"bib3","doi-asserted-by":"publisher","first-page":"193","DOI":"10.1016\/S0006-3495(77)85544-6","article-title":"Physics of Chemoreception","volume":"20","author":"Berg","year":"1977","journal-title":"Biophysical Journal"},{"key":"bib4","doi-asserted-by":"publisher","first-page":"499","DOI":"10.1146\/annurev-micro-092412-155626","article-title":"Cnidarian-microbe interactions and the origin of innate immunity in Metazoans","volume":"67","author":"Bosch","year":"2013","journal-title":"Annual Review of Microbiology"},{"key":"bib5","doi-asserted-by":"publisher","first-page":"495","DOI":"10.1016\/j.it.2014.07.008","article-title":"Rethinking the role of immunity: lessons from Hydra","volume":"35","author":"Bosch","year":"2014","journal-title":"Trends in Immunology"},{"key":"bib6","doi-asserted-by":"publisher","first-page":"92","DOI":"10.1016\/j.tins.2016.11.005","article-title":"Back to the basics: Cnidarians start to fire","volume":"40","author":"Bosch","year":"2017","journal-title":"Trends in Neurosciences"},{"key":"bib7","doi-asserted-by":"publisher","first-page":"399","DOI":"10.1016\/bs.ctdb.2020.11.007","article-title":"Animal development in the microbial world: re-thinking the conceptual framework","volume":"141","author":"Bosch","year":"2021","journal-title":"Current Topics in Developmental Biology"},{"key":"bib8","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0052278","article-title":"Horizontal gene transfer contributed to the evolution of extracellular surface structures: the freshwater Polyp Hydra is covered by a complex fibrous Cuticle containing Glycosaminoglycans and proteins of the Ppod and Swt (sweet tooth) families","volume":"7","author":"B\u00f6ttger","year":"2012","journal-title":"PLOS ONE"},{"key":"bib9","doi-asserted-by":"publisher","first-page":"581","DOI":"10.1038\/nmeth.3869","article-title":"Dada2: high-resolution sample inference from Illumina Amplicon data","volume":"13","author":"Callahan","year":"2016","journal-title":"Nature Methods"},{"key":"bib10","volume-title":"Conduction of Heat in Solids","author":"Carslaw","year":"1959"},{"key":"bib11","doi-asserted-by":"publisher","first-page":"11414","DOI":"10.1073\/pnas.1601306113","article-title":"Effect of flow and Peristaltic mixing on bacterial growth in a gut-like channel","volume":"113","author":"Cremer","year":"2016","journal-title":"PNAS"},{"key":"bib12","doi-asserted-by":"publisher","first-page":"443","DOI":"10.1093\/icb\/4.4.443","article-title":"Biology, molecular and organismic","volume":"4","author":"Dobzhansky","year":"1964","journal-title":"American Zoologist"},{"key":"bib13","doi-asserted-by":"publisher","first-page":"772","DOI":"10.1038\/s12276-021-00617-8","article-title":"Slimy partners: the mucus barrier and gut Microbiome in ulcerative colitis","volume":"53","author":"Fang","year":"2021","journal-title":"Experimental & Molecular Medicine"},{"key":"bib14","doi-asserted-by":"publisher","first-page":"6418","DOI":"10.1128\/JB.00621-10","article-title":"Silent mischief: Bacteriophage mu insertions contaminate products of Escherichia coli random Mutagenesis performed using suicidal Transposon delivery Plasmids mobilized by broad-host-range Rp4 Conjugative machinery","volume":"192","author":"Ferri\u00e8res","year":"2010","journal-title":"Journal of Bacteriology"},{"key":"bib15","doi-asserted-by":"publisher","first-page":"1288","DOI":"10.1016\/j.cell.2016.02.037","article-title":"Signaling in host-associated microbial communities","volume":"164","author":"Fischbach","year":"2016","journal-title":"Cell"},{"key":"bib16","doi-asserted-by":"publisher","first-page":"E3730","DOI":"10.1073\/pnas.1304960110","article-title":"Distinct antimicrobial peptide expression determines host species-specific bacterial associations","volume":"110","author":"Franzenburg","year":"2013","journal-title":"PNAS"},{"key":"bib17","doi-asserted-by":"publisher","first-page":"1543","DOI":"10.1038\/ismej.2014.239","article-title":"Bacteria-bacteria interactions within the Microbiota of the ancestral Metazoan Hydra contribute to fungal resistance","volume":"9","author":"Fraune","year":"2015","journal-title":"The ISME Journal"},{"key":"bib18","doi-asserted-by":"publisher","first-page":"1006","DOI":"10.1136\/gut.27.9.1006","article-title":"Human Colonic smooth muscle: spontaneous contractile activity and response to stretch","volume":"27","author":"Gill","year":"1986","journal-title":"Gut"},{"key":"bib19","doi-asserted-by":"publisher","first-page":"380","DOI":"10.1038\/nphys3981","article-title":"Vortex arrays and Ciliary tangles underlie the feeding\u2013swimming trade-off in Starfish larvae","volume":"13","author":"Gilpin","year":"2017","journal-title":"Nature Physics"},{"key":"bib20","doi-asserted-by":"publisher","first-page":"245","DOI":"10.1111\/j.1467-985X.2010.00676_9.x","article-title":"Ggplot2: elegant Graphics for data analysis","volume":"174","author":"Ginestet","year":"2011","journal-title":"Journal of the Royal Statistical Society Series A"},{"key":"bib21","doi-asserted-by":"publisher","first-page":"559","DOI":"10.1136\/gutjnl-2016-311935","article-title":"Stool frequency is associated with gut Microbiota composition","volume":"66","author":"Hadizadeh","year":"2017","journal-title":"Gut"},{"key":"bib22","doi-asserted-by":"publisher","DOI":"10.7554\/eLife.32605","article-title":"Comprehensive machine learning analysis of Hydra behavior reveals a stable basal behavioral repertoire","volume":"7","author":"Han","year":"2018","journal-title":"eLife"},{"key":"bib23","doi-asserted-by":"publisher","first-page":"1239","DOI":"10.1113\/jphysiol.2007.134403","article-title":"Characterization of flow and mixing regimes within the ileum of the Brushtail possum using residence time distribution analysis with simultaneous Spatio-temporal mapping","volume":"582","author":"Janssen","year":"2007","journal-title":"The Journal of Physiology"},{"key":"bib24","doi-asserted-by":"publisher","DOI":"10.1186\/s40851-019-0127-1","article-title":"Hydra Vulgaris exhibits day-night variation in behavior and gene expression levels","volume":"5","author":"Kanaya","year":"2019","journal-title":"Zoological Letters"},{"key":"bib25","doi-asserted-by":"publisher","DOI":"10.3390\/d13110527","article-title":"Developing inside a layer of germs\u2014a potential role for Multiciliated surface cells in vertebrate embryos","volume":"13","author":"Kerney","year":"2021","journal-title":"Diversity"},{"key":"bib26","doi-asserted-by":"publisher","DOI":"10.1002\/bies.201800060","article-title":"Rethinking the role of the nervous system: lessons from the Hydra Holobiont","volume":"40","author":"Klimovich","year":"2018","journal-title":"BioEssays"},{"key":"bib27","doi-asserted-by":"publisher","first-page":"951","DOI":"10.18632\/aging.101440","article-title":"Non-Senescent Hydra Tolerates severe disturbances in the nuclear Lamina","volume":"10","author":"Klimovich","year":"2018","journal-title":"Aging"},{"key":"bib28","doi-asserted-by":"publisher","first-page":"2069","DOI":"10.1038\/s41596-019-0173-3","article-title":"Transgenesis in Hydra to characterize gene function and visualize cell behavior","volume":"14","author":"Klimovich","year":"2019","journal-title":"Nature Protocols"},{"key":"bib29","doi-asserted-by":"publisher","first-page":"17854","DOI":"10.1073\/pnas.1920469117","article-title":"Prototypical pacemaker neurons interact with the resident Microbiota","volume":"117","author":"Klimovich","year":"2020","journal-title":"PNAS"},{"key":"bib30","doi-asserted-by":"publisher","first-page":"77","DOI":"10.1016\/0016-5085(88)90293-4","article-title":"Spontaneous contractions and some electrophysiologic properties of circular muscle from normal sigmoid colon and ulcerative colitis","volume":"95","author":"Koch","year":"1988","journal-title":"Gastroenterology"},{"key":"bib31","doi-asserted-by":"publisher","first-page":"3855","DOI":"10.1016\/j.cub.2022.07.017","article-title":"Sponges sneeze mucus to shed particulate waste from their seawater inlet pores","volume":"32","author":"Kornder","year":"2022","journal-title":"Current Biology"},{"key":"bib32","doi-asserted-by":"publisher","first-page":"1489","DOI":"10.1053\/j.gastro.2014.02.009","article-title":"The Microbiome in inflammatory bowel disease: Current status and the future ahead","volume":"146","author":"Kostic","year":"2014","journal-title":"Gastroenterology"},{"key":"bib33","doi-asserted-by":"publisher","first-page":"8978","DOI":"10.1073\/pnas.1301826110","article-title":"Benefit of pulsation in soft corals","volume":"110","author":"Kremien","year":"2013","journal-title":"PNAS"},{"key":"bib34","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-014-0550-8","article-title":"Moderated estimation of fold change and dispersion for RNA-Seq data with Deseq2","volume":"15","author":"Love","year":"2014","journal-title":"Genome Biology"},{"key":"bib35","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0061217","article-title":"Phyloseq: an R package for reproducible interactive analysis and graphics of Microbiome census data","volume":"8","author":"McMurdie","year":"2013","journal-title":"PLOS ONE"},{"key":"bib36","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-017-16191-x","article-title":"Spontaneous body contractions are modulated by the Microbiome of Hydra","volume":"7","author":"Murillo-Rincon","year":"2017","journal-title":"Scientific Reports"},{"key":"bib37","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1009508","article-title":"Microbiota\u2013host communications: bacterial extracellular Vesicles as a common language","volume":"17","author":"\u00d1ahui Palomino","year":"2021","journal-title":"PLOS Pathogens"},{"key":"bib38","doi-asserted-by":"publisher","first-page":"389","DOI":"10.1098\/rsbl.2010.0068","article-title":"Phenotypic plasticity in juvenile Jellyfish Medusae facilitates effective animal\u2013fluid interaction","volume":"6","author":"Nawroth","year":"2010","journal-title":"Biology Letters"},{"key":"bib39","doi-asserted-by":"publisher","first-page":"792","DOI":"10.1038\/nbt.2269","article-title":"A tissue-engineered Jellyfish with Biomimetic propulsion","volume":"30","author":"Nawroth","year":"2012","journal-title":"Nature Biotechnology"},{"key":"bib40","doi-asserted-by":"publisher","DOI":"10.1063\/1.4893537","article-title":"Induced drift by a self-propelled swimmer at intermediate Reynolds numbers","volume":"26","author":"Nawroth","year":"2014","journal-title":"Physics of Fluids"},{"key":"bib41","doi-asserted-by":"publisher","first-page":"9510","DOI":"10.1073\/pnas.1706926114","article-title":"Motile cilia create fluid-mechanical Microhabitats for the active recruitment of the host Microbiome","volume":"114","author":"Nawroth","year":"2017","journal-title":"PNAS"},{"key":"bib42","article-title":"Vegan","volume-title":"Github","author":"Oksanen","year":"2013","unstructured":"Oksanen J, Blanchet FG, Kindt R, Legendre P, McGlinn D, Minchin PR, O\u2019Hara RB, Simpson GL, Solymos P, Stevens MHH, Szoecs E, Wagner H. 2013. Vegan. Github. 0ddfa4e. https:\/\/github.com\/vegandevs\/vegan."},{"key":"bib43","doi-asserted-by":"publisher","first-page":"851","DOI":"10.1098\/rsif.2009.0419","article-title":"Nearby boundaries create eddies near microscopic filter feeders","volume":"7","author":"Pepper","year":"2010","journal-title":"Journal of the Royal Society, Interface"},{"key":"bib44","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1119\/1.10903","article-title":"Life at low Reynolds number","volume":"45","author":"Purcell","year":"1977","journal-title":"American Journal of Physics"},{"key":"bib45","doi-asserted-by":"publisher","first-page":"343","DOI":"10.1016\/j.ijmm.2016.03.004","article-title":"Analysis of factors contributing to variation in the C57Bl\/6J fecal Microbiota across German animal facilities","volume":"306","author":"Rausch","year":"2016","journal-title":"International Journal of Medical Microbiology"},{"key":"bib46","doi-asserted-by":"publisher","DOI":"10.1111\/nmo.13435","article-title":"Improved imaging of Zebrafish motility","volume":"30","author":"Rich","year":"2018","journal-title":"Neurogastroenterology and Motility"},{"key":"bib47","doi-asserted-by":"publisher","first-page":"886","DOI":"10.1126\/science.aay2832","article-title":"The role of multiple global change factors in driving soil functions and microbial Biodiversity","volume":"366","author":"Rillig","year":"2019","journal-title":"Science"},{"key":"bib48","volume-title":"Introduction to Probability Models","author":"Ross","year":"2014"},{"key":"bib49","doi-asserted-by":"publisher","first-page":"760","DOI":"10.1126\/science.139.3556.760","article-title":"Behavior in Hydra: contraction responses of Hydra Pirardi to mechanical and light stimuli","volume":"139","author":"Rushforth","year":"1963","journal-title":"Science"},{"key":"bib50","doi-asserted-by":"publisher","DOI":"10.1242\/jeb.192518","article-title":"A novel mechanism of mixing by pulsing corals","volume":"222","author":"Samson","year":"2019","journal-title":"The Journal of Experimental Biology"},{"key":"bib51","doi-asserted-by":"publisher","first-page":"413","DOI":"10.1002\/jez.1402600316","article-title":"Homeoboxes in Cnidarians","volume":"260","author":"Schierwater","year":"1991","journal-title":"The Journal of Experimental Zoology"},{"key":"bib52","doi-asserted-by":"publisher","first-page":"676","DOI":"10.1038\/nmeth.2019","article-title":"Fiji: an open-source platform for biological-image analysis","volume":"9","author":"Schindelin","year":"2012","journal-title":"Nature Methods"},{"key":"bib53","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-85829-1","volume-title":"Boundary-Layer Theory","author":"Schlichting","year":"2000"},{"key":"bib54","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.01184-16","article-title":"The origin of Mucosal immunity: lessons from the Holobiont Hydra","volume":"7","author":"Schr\u00f6der","year":"2016","journal-title":"MBio"},{"key":"bib55","doi-asserted-by":"publisher","first-page":"737","DOI":"10.1016\/0016-5085(82)90320-1","article-title":"Influence of the Interdigestive Myoelectric complex on Enteric Flora in the rat","volume":"82","author":"Scott","year":"1982","journal-title":"Gastroenterology"},{"key":"bib56","doi-asserted-by":"publisher","DOI":"10.1186\/gb-2011-12-6-r60","article-title":"Metagenomic biomarker discovery and explanation","volume":"12","author":"Segata","year":"2011","journal-title":"Genome Biology"},{"key":"bib57","doi-asserted-by":"publisher","DOI":"10.3791\/53828","article-title":"Video imaging and Spatiotemporal maps to analyze gastrointestinal motility in mice","volume":"1","author":"Swaminathan","year":"2016","journal-title":"Journal of Visualized Experiments"},{"key":"bib58","doi-asserted-by":"publisher","DOI":"10.5334\/jors.bl","article-title":"Pivlab\u2013towards user-friendly, affordable and accurate Digital particle image Velocimetry in Matlab","volume":"2","author":"Thielicke","year":"2014","journal-title":"Journal of Open Research Software"},{"key":"bib59","doi-asserted-by":"publisher","DOI":"10.1088\/1752-7155\/6\/2\/024001","article-title":"Microbial volatile compounds in health and disease conditions","volume":"6","author":"Thorn","year":"2012","journal-title":"Journal of Breath Research"},{"key":"bib60","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0026243","article-title":"Dancing for food in the deep sea: bacterial farming by a new species of Yeti crab","volume":"6","author":"Thurber","year":"2011","journal-title":"PLOS ONE"},{"key":"bib61","doi-asserted-by":"publisher","first-page":"80","DOI":"10.1016\/j.ymeth.2016.09.016","article-title":"Trackmate: an open and extensible platform for single-particle tracking","volume":"115","author":"Tinevez","year":"2017","journal-title":"Methods"},{"key":"bib62","first-page":"387","article-title":"Bacterial overgrowth of the gastrointestinal tract","volume":"38","author":"Toskes","year":"1993","journal-title":"Advances in Internal Medicine"},{"key":"bib63","doi-asserted-by":"publisher","DOI":"10.1038\/srep22940","article-title":"Pharyngeal pumping in Caenorhabditis elegans depends on tonic and Phasic signaling from the nervous system","volume":"6","author":"Trojanowski","year":"2016","journal-title":"Scientific Reports"},{"key":"bib64","doi-asserted-by":"publisher","first-page":"57","DOI":"10.1136\/gutjnl-2015-309618","article-title":"Stool consistency is strongly associated with gut Microbiota richness and composition, Enterotypes and bacterial growth rates","volume":"65","author":"Vandeputte","year":"2016","journal-title":"Gut"},{"key":"bib65","doi-asserted-by":"publisher","DOI":"10.2307\/j.ctvzsmfc6","volume-title":"Life in Moving Fluids: The Physical Biology of Flow-Revised And","author":"Vogel","year":"2020"},{"key":"bib66","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2018.00443","article-title":"Carrying capacity and Colonization Dynamics of Curvibacter in the Hydra host habitat","volume":"9","author":"Wein","year":"2018","journal-title":"Frontiers in Microbiology"},{"key":"bib67","doi-asserted-by":"publisher","first-page":"213","DOI":"10.1146\/annurev-cellbio-100818-125119","article-title":"Not just going with the flow: the effects of fluid flow on bacteria and Plankton","volume":"35","author":"Wheeler","year":"2019","journal-title":"Annual Review of Cell and Developmental Biology"},{"key":"bib68","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.01877-18","article-title":"Modernized tools for streamlined genetic manipulation and comparative study of wild and diverse Proteobacterial lineages","volume":"9","author":"Wiles","year":"2018","journal-title":"MBio"},{"key":"bib69","doi-asserted-by":"publisher","first-page":"6208","DOI":"10.1073\/pnas.0510163103","article-title":"Transgenic Hydra allow in vivo tracking of individual stem cells during Morphogenesis","volume":"103","author":"Wittlieb","year":"2006","journal-title":"PNAS"},{"key":"bib70","doi-asserted-by":"publisher","DOI":"10.1523\/ENEURO.0539-19.2020","article-title":"Whole-body imaging of neural and muscle activity during behavior in Hydra Vulgaris: effect of Osmolarity on contraction bursts","volume":"7","author":"Yamamoto","year":"2020","journal-title":"ENeuro"}],"container-title":["eLife"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/cdn.elifesciences.org\/articles\/83637\/elife-83637-v2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/cdn.elifesciences.org\/articles\/83637\/elife-83637-v2.xml","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/elifesciences.org\/articles\/83637","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,10,11]],"date-time":"2023-10-11T21:10:47Z","timestamp":1697058647000},"score":1,"resource":{"primary":{"URL":"https:\/\/elifesciences.org\/articles\/83637"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,7,3]]},"references-count":70,"alternative-id":["10.7554\/eLife.83637"],"URL":"https:\/\/doi.org\/10.7554\/elife.83637","archive":["CLOCKSS"],"relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2022.11.30.518486","asserted-by":"subject"},{"id-type":"doi","id":"10.1101\/2022.11.30.518486","asserted-by":"object"}],"is-supplemented-by":[{"id-type":"accession","id":"PRJNA842888","asserted-by":"subject"}],"has-review":[{"id-type":"doi","id":"10.7554\/eLife.83637.sa2","asserted-by":"object"},{"id-type":"doi","id":"10.7554\/eLife.83637.sa0","asserted-by":"object"},{"id-type":"doi","id":"10.7554\/eLife.83637.sa1","asserted-by":"object"}]},"ISSN":["2050-084X"],"issn-type":[{"value":"2050-084X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2023,7,3]]},"assertion":[{"value":"single anonymised","name":"peer_review_transparency","label":"Peer review transparency","group":{"name":"peer_review_taxonomy"}},{"value":"other reviewer(s), editor","name":"peer_review_interaction","label":"Peer review interaction","group":{"name":"peer_review_taxonomy"}},{"value":"review summaries, review reports, author\/editor communication, reviewer identities reviewer opt in, editor identities","name":"peer_review_published","label":"Peer review published","group":{"name":"peer_review_taxonomy"}},{"value":"open (sign in with ORCID iD required)","name":"post_publication_commenting","label":"Post publication commenting","group":{"name":"post_publication_commenting"}}],"article-number":"e83637"}}