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A major challenge in this field lies in the limitations of traditional brain imaging techniques, which often capture only fragments of the complex puzzle of brain function. Our research employs a novel approach termed \u2018molecular connectivity\u2019 (MC), which combines the strengths of various imaging methods to provide a comprehensive view of how specific molecules, such as the serotonin transporter, interact across different brain regions and influence brain function. This innovative technique bridges the gap between functional magnetic resonance imaging (fMRI), known for its ability to monitor brain activity by tracking blood flow, and positron emission tomography (PET), which visualizes specific molecular changes. By integrating these methods, we can better understand how drugs influence brain function. Our study focuses on the application of dynamic [\n                    <jats:sup>11<\/jats:sup>\n                    C]DASB PET scans to map the distribution of serotonin transporters, key players in regulating mood and emotions, and examines how these transporters are altered following exposure to methylenedioxymethamphetamine (MDMA), which is commonly known as ecstasy. Through a detailed comparison of MC with traditional measures of brain connectivity, we reveal significant patterns that closely align with physiological changes. Our results revealed clear changes in molecular connectivity after a single dose of MDMA, establishing a direct link between the effects of drugs on serotonin transporter occupancy and changes in the functional brain network. This work offers a novel methodology for the in-depth study of brain function at the molecular level and opens new pathways for understanding how drugs modulate brain activity.\n                  <\/jats:p>","DOI":"10.7554\/elife.97864","type":"journal-article","created":{"date-parts":[[2024,7,24]],"date-time":"2024-07-24T12:25:22Z","timestamp":1721823922000},"update-policy":"https:\/\/doi.org\/10.7554\/elife.97864","source":"Crossref","is-referenced-by-count":1,"title":["Mapping serotonergic dynamics using drug-modulated molecular connectivity in rats"],"prefix":"10.7554","volume":"13","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-7623-9566","authenticated-orcid":true,"given":"Tudor M","family":"Ionescu","sequence":"first","affiliation":[{"id":[{"id":"https:\/\/ror.org\/03a1kwz48","id-type":"ROR","asserted-by":"publisher"}],"name":"Werner Siemens Imaging Center, Department of Preclinical Imaging and Radiopharmacy, Eberhard Karls University Tuebingen","place":["Tuebingen, 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