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This article does not contain any studies involving animals or human participants performed by any of the authors.","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"COMPLIANCE WITH ETHICAL STANDARDS"}},{"value":"Samples analysed during this study has been deposited in the LAH Herbarium, University of the Punjab, Lahore (\n                      \n                      ). Sequences generated during this study has been deposited in NCBI, GenBank data repository (\n                      \n                      ).","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"ADDITIONAL INFORMATION"}}]},{"indexed":{"date-parts":[[2026,5,18]],"date-time":"2026-05-18T12:07:19Z","timestamp":1779106039174,"version":"3.51.4"},"posted":{"date-parts":[[2024,1,31]]},"reference-count":0,"publisher":"Wiley","content-domain":{"domain":[],"crossmark-restriction":false},"abstract":"<jats:p>\n                  The plant bug,\n                  <jats:italic toggle=\"yes\">Pachypeltis micranthus<\/jats:italic>\n                  Mu et Liu (Hemiptera:\nMiridae), is a potential biological control agent for\n                  <jats:italic toggle=\"yes\">Mikania\nmicrantha<\/jats:italic>\n                  H.B.K. (Asteraceae; one of the most invasive weeds\nworldwide). To date, only a few studies have investigated plant bugs.\nHere, we performed a chromosome-level genome assembly of\n                  <jats:italic toggle=\"yes\">P.\nmicranthus<\/jats:italic>\n                  using MGISEQ-2000 short-read, Nanopore, PacBio long-read,\nand high-throughput chromosome conformation capture (Hi-C) techniques.\nThe assembled genome was 712.72 Mb in size, with a contig N50 of 16.84\nMb. Using the Hi-C technique, 71 scaffolds were assembled into 15\nchromosomes, accounting for 99.96%. We predicted 11,746 protein-coding\ngenes in\n                  <jats:italic toggle=\"yes\">P. micranthus<\/jats:italic>\n                  with 96.20% complete benchmarking\nuniversal single-copy orthologs. Phylogenomic analysis showed that\n                  <jats:italic toggle=\"yes\">P. micranthus<\/jats:italic>\n                  and two other Miridae bugs (\n                  <jats:italic toggle=\"yes\">Apolygus lucorum<\/jats:italic>\n                  and\n                  <jats:italic toggle=\"yes\">Nesidiocoris tenuis<\/jats:italic>\n                  ) diverged from the common ancestor\napproximately 200.01 million years ago. Chromosome synteny analysis\nbetween\n                  <jats:italic toggle=\"yes\">P. micranthus<\/jats:italic>\n                  and\n                  <jats:italic toggle=\"yes\">A. lucorum<\/jats:italic>\n                  indicated high-level\nsynteny. Many gene families including chemosensory genes and digestive\nand detoxification enzyme genes\u2014were significantly expanded in the\n                  <jats:italic toggle=\"yes\">P. micranthus<\/jats:italic>\n                  genome. These expanded gene families may indicate\nthe bug to adapt to the single host plant. This high-quality\nchromosome-level genome assembly provides an invaluable resource for\nfurther molecular and evolutionary research on mirid bugs and also\nprovides a basis for further research on biological control mechanisms\nfor\n                  <jats:italic toggle=\"yes\">M. micrantha<\/jats:italic>\n                  .\n                <\/jats:p>","DOI":"10.22541\/au.170668451.17862296\/v1","type":"posted-content","created":{"date-parts":[[2024,1,31]],"date-time":"2024-01-31T02:02:06Z","timestamp":1706666526000},"source":"Crossref","is-referenced-by-count":0,"title":["Genome sequencing of Pachypeltis micranthus Mu et Liu (Hemiptera: Miridae), a potential biological control agent for Mikania micrantha"],"prefix":"10.22541","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-4613-1367","authenticated-orcid":false,"given":"Xiafei","family":"Wang","sequence":"first","affiliation":[{"name":"Southwest Forestry 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University"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"311","link":[{"URL":"https:\/\/www.authorea.com\/doi\/pdf\/10.22541\/au.170668451.17862296\/v1","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,5,18]],"date-time":"2026-05-18T11:08:18Z","timestamp":1779102498000},"score":12.519726,"resource":{"primary":{"URL":"https:\/\/www.authorea.com\/doi\/full\/10.22541\/au.170668451.17862296\/v1"}},"issued":{"date-parts":[[2024,1,31]]},"references-count":0,"URL":"https:\/\/doi.org\/10.22541\/au.170668451.17862296\/v1","published":{"date-parts":[[2024,1,31]]},"subtype":"preprint"},{"indexed":{"date-parts":[[2025,7,5]],"date-time":"2025-07-05T04:10:18Z","timestamp":1751688618983,"version":"3.41.0"},"posted":{"date-parts":[[2025]]},"group-title":"SSRN","reference-count":0,"publisher":"Elsevier BV","content-domain":{"domain":[],"crossmark-restriction":false},"DOI":"10.2139\/ssrn.5304832","type":"posted-content","created":{"date-parts":[[2025,6,18]],"date-time":"2025-06-18T19:18:19Z","timestamp":1750274299000},"source":"Crossref","is-referenced-by-count":0,"title":["Transcriptomic and Metabolomic Analyses Uncover the Molecular Defense Strategy of Mikania Micrantha Under Feeding Stress from Pachypeltis Micranthus"],"prefix":"10.2139","author":[{"given":"Bin","family":"Yang","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiafei","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jinqiang","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wenzhu","family":"Ai","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ning","family":"Zhao","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yongke","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Liyue","family":"Xu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiangdong","family":"Kong","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jing","family":"Gao","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Chengmei","family":"Zheng","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","deposited":{"date-parts":[[2025,7,4]],"date-time":"2025-07-04T14:26:14Z","timestamp":1751639174000},"score":12.4740925,"resource":{"primary":{"URL":"https:\/\/www.ssrn.com\/abstract=5304832"}},"issued":{"date-parts":[[2025]]},"references-count":0,"URL":"https:\/\/doi.org\/10.2139\/ssrn.5304832","published":{"date-parts":[[2025]]},"subtype":"preprint"},{"indexed":{"date-parts":[[2026,8,18]],"date-time":"2026-08-18T05:53:37Z","timestamp":1787032417982,"version":"build-2736575974"},"reference-count":0,"publisher":"Researcher 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Rese."],"DOI":"10.5958\/0974-4576.2019.00059.8","type":"journal-article","created":{"date-parts":[[2019,11,12]],"date-time":"2019-11-12T06:38:26Z","timestamp":1573540706000},"page":"319","source":"Crossref","is-referenced-by-count":1,"title":["Biology of\n                    <i>Helopeltis antonii<\/i>\n                    Signoret and\n                    <i>Pachypeltis measarum<\/i>\n                    Kirkaldy (Hemiptera: Miridae) on Cashew"],"prefix":"10.65521","volume":"43","author":[{"given":"Omprakash","family":"Navik","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S.K.","family":"Godase","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S.K.","family":"Mehendale","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"55029","published-online":{"date-parts":[[2019]]},"container-title":["Journal of Entomological 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Published by Elsevier B.V.","name":"copyright","label":"Copyright"}],"article-number":"101097"},{"indexed":{"date-parts":[[2026,2,27]],"date-time":"2026-02-27T04:11:58Z","timestamp":1772165518522,"version":"3.50.1"},"reference-count":183,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2023,6,20]],"date-time":"2023-06-20T00:00:00Z","timestamp":1687219200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0"},{"start":{"date-parts":[[2023,6,20]],"date-time":"2023-06-20T00:00:00Z","timestamp":1687219200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0"}],"funder":[{"name":"Province Key R&D program of Yunnan","award":["2018BB009"],"award-info":[{"award-number":["2018BB009"]}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Genomics"],"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:sec>\n                    <jats:title>Background<\/jats:title>\n                    <jats:p>\n                      The plant bug,\n                      <jats:italic>Pachypeltis micranthus<\/jats:italic>\n                      Mu et Liu (Hemiptera: Miridae), is an effective potential biological control agent for\n                      <jats:italic>Mikania micrantha<\/jats:italic>\n                      H.B.K. (Asteraceae; one of the most notorious invasive weeds worldwide). However, limited knowledge about this species hindered its practical application and research. Accordingly, sequencing the genome of this mirid bug holds great significance in controlling\n                      <jats:italic>M. micrantha<\/jats:italic>\n                      .\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>\n                      Here, 712.72\u00a0Mb high-quality chromosome-level scaffolds of\n                      <jats:italic>P. micranthus<\/jats:italic>\n                      were generated, of which 707.51\u00a0Mb (99.27%) of assembled sequences were anchored onto 15 chromosome-level scaffolds with contig N50 of 16.84\u00a0Mb. The\n                      <jats:italic>P. micranthus<\/jats:italic>\n                      genome had the highest GC content (42.43%) and the second highest proportion of repetitive sequences (375.82\u00a0Mb, 52.73%) than the three other mirid bugs (i.e.,\n                      <jats:italic>Apolygus lucorum<\/jats:italic>\n                      ,\n                      <jats:italic>Cyrtorhinus lividipennis<\/jats:italic>\n                      , and\n                      <jats:italic>Nesidiocoris tenuis<\/jats:italic>\n                      ). Phylogenetic analysis showed that\n                      <jats:italic>P. micranthus<\/jats:italic>\n                      clustered with other mirid bugs and diverged from the common ancestor approximately 200 million years ago. Gene family expansion and\/or contraction were analyzed, and significantly expanded gene families associated with\n                      <jats:italic>P. micranthus<\/jats:italic>\n                      feeding and adaptation to\n                      <jats:italic>M. micrantha<\/jats:italic>\n                      were manually identified. Compared with the whole body, transcriptome analysis of the salivary gland revealed that most of the upregulated genes were significantly associated with metabolism pathways and peptidase activity, particularly among cysteine peptidase, serine peptidase, and polygalacturonase; this could be one of the reasons for precisely and highly efficient feeding by the oligophagous bug\n                      <jats:italic>P. micranthus<\/jats:italic>\n                      on\n                      <jats:italic>M. micrantha<\/jats:italic>\n                      .\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusion<\/jats:title>\n                    <jats:p>\n                      Collectively, this work provides a crucial chromosome-level scaffolds resource to study the evolutionary adaptation between mirid bug and their host. It is also helpful in searching for novel environment-friendly biological strategies to control\n                      <jats:italic>M. micrantha<\/jats:italic>\n                      .\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1186\/s12864-023-09445-8","type":"journal-article","created":{"date-parts":[[2023,6,20]],"date-time":"2023-06-20T03:03:04Z","timestamp":1687230184000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["High-quality chromosome-level scaffolds of the plant bug Pachypeltis micranthus provide insights into the availability of Mikania micrantha control"],"prefix":"10.1186","volume":"24","author":[{"given":"Xiafei","family":"Wang","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ning","family":"Zhao","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Liqiong","family":"Cai","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Naiyong","family":"Liu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jiaying","family":"Zhu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bin","family":"Yang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2023,6,20]]},"reference":[{"issue":"3","key":"9445_CR1","first-page":"181","volume":"39","author":"Y Mu","year":"2017","unstructured":"Mu Y, Liu G. 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(Asteraceae; one of the most notorious invasive weeds worldwide). However, limited knowledge about this species hindered its practical application and research. Accordingly, we sequenced the genome of this mirid bug, which is of great significance for<jats:italic>M. micrantha<\/jats:italic>control.<jats:bold>Results<\/jats:bold>Here, we generated a 712.72 Mb high-quality chromosome-level assembly of<jats:italic>P. micranthus<\/jats:italic>, of which 707.51 Mb (99.27%) of assembled sequences were anchored onto 15 chromosomes with contig N50 of 16.84 Mb. The<jats:italic>P. micranthus<\/jats:italic>genome had the highest GC content (42.43%) and the second highest proportion of repetitive sequences (375.82 Mb, 52.73%) than the three other mirid bugs (i.e.,<jats:italic>Apolygus lucorum<\/jats:italic>,<jats:italic>Cyrtorhinus lividipennis<\/jats:italic>, and<jats:italic>Nesidiocoris tenuis<\/jats:italic>). Phylogenetic analysis showed that<jats:italic>P. micranthus<\/jats:italic>clustered with other mirid bugs and diverged from the common ancestor approximately 200.01 million years ago. We analyzed gene family expansion and or contraction and manually identified some significantly expanded gene families associated with<jats:italic>P. micranthus<\/jats:italic>feeding and adaptation to<jats:italic>M. micrantha<\/jats:italic>. Compared with the whole body, transcriptome analysis of the salivary gland revealed that most of the upregulated genes were significantly associated with metabolism pathways and peptidase activity, particularly among cysteine peptidase, serine peptidase, and polygalacturonase; this could be one of the reasons for precisely and highly efficient feeding by the oligophagous bug<jats:italic>P. micranthus<\/jats:italic>on<jats:italic>M. micrantha<\/jats:italic>.<jats:bold>Conclusion<\/jats:bold>Collectively, this work provides a crucial chromosome-level genome resource to study the evolutionary adaptation between mirid bug and their host. It is also helpful in searching for novel environment-friendly biological strategies to control<jats:italic>M. micrantha<\/jats:italic>.<\/jats:p>","DOI":"10.21203\/rs.3.rs-2769389\/v1","type":"posted-content","created":{"date-parts":[[2023,4,12]],"date-time":"2023-04-12T20:28:22Z","timestamp":1681331302000},"source":"Crossref","is-referenced-by-count":0,"title":["High-quality chromosome-level genome assembly of the plant bug Pachypeltis micranthus provides insights into the availability of Mikania micrantha control"],"prefix":"10.21203","author":[{"given":"Xiafei","family":"Wang","sequence":"first","affiliation":[{"name":"Southwest Forestry University"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ning","family":"Zhao","sequence":"additional","affiliation":[{"name":"Southwest Forestry University"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Liqiong","family":"Cai","sequence":"additional","affiliation":[{"name":"Southwest Forestry University"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Naiyong","family":"Liu","sequence":"additional","affiliation":[{"name":"Southwest Forestry University"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jiaying","family":"Zhu","sequence":"additional","affiliation":[{"name":"Southwest Forestry University"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bin","family":"Yang","sequence":"additional","affiliation":[{"name":"Southwest Forestry University"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"8761","reference":[{"issue":"3","key":"ref1","first-page":"181","article-title":"A new species in the genus Pachypeltis (Hemiptera: Miridae) from China","volume":"39","author":"Mu Y","year":"2017","unstructured":"Mu Y, Liu G. 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