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The specimen was identified based on morphological comparison with the types deposited at the Senckenberg Natural History Museum in Dresden, Germany. Further explorations must be conducted to study the biology, ecology, population, and distribution of P. rizali.<\/jats:p>","DOI":"10.56899\/153.01.04","type":"journal-article","created":{"date-parts":[[2024,9,18]],"date-time":"2024-09-18T01:20:57Z","timestamp":1726622457000},"source":"Crossref","is-referenced-by-count":1,"title":["New Distribution Record for Rizal\u2019s Jewel Weevil Pachyrhynchus rizali Schultze, 1934 (Coleoptera: Curculionidae: Entiminae)"],"prefix":"10.56899","volume":"153","author":[{"given":"Jhonnel","family":"Villegas","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Perry 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For instance, it is unknown whether translocation rates differ between insect orders. We address broad scale patterns of genome architecture across Insecta by examining synteny in a phylogenetic framework from open-source insect genomes. To accomplish this, we add a chromosome level genome to a crucial lineage, Coleoptera. Our assembly of the\n                    <jats:italic>Pachyrhynchus sulphureomaculatus<\/jats:italic>\n                    genome is the first chromosome scale genome for the hyperdiverse Phytophaga lineage and currently the largest insect genome assembled to this scale. The genome is significantly larger than those of other weevils, and this increase in size is caused by repetitive elements. Our results also indicate that, among beetles, there are instances of long-lasting (&gt;200 Ma) localization of genes to a particular chromosome with few translocation events. While some chromosomes have a paucity of translocations, intra-chromosomal synteny was almost absent, with gene order thoroughly shuffled along a chromosome. This large amount of reshuffling within chromosomes with few inter-chromosomal events contrasts with patterns seen in mammals in which the chromosomes tend to exchange larger blocks of material more readily. To place our findings in an evolutionary context, we compared syntenic patterns across Insecta in a phylogenetic framework. For the first time, we find that synteny decays at an exponential rate relative to phylogenetic distance. Additionally, there are significant differences in decay rates between insect orders, this pattern was not driven by Lepidoptera alone which has a substantially different rate.\n                  <\/jats:p>","DOI":"10.1371\/journal.pgen.1009745","type":"journal-article","created":{"date-parts":[[2021,8,30]],"date-time":"2021-08-30T13:34:08Z","timestamp":1630330448000},"page":"e1009745","update-policy":"https:\/\/doi.org\/10.1371\/journal.pgen.corrections_policy","source":"Crossref","is-referenced-by-count":26,"title":["The Easter Egg Weevil (Pachyrhynchus) genome reveals syntenic patterns in Coleoptera across 200 million years of evolution"],"prefix":"10.1371","volume":"17","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-7473-9727","authenticated-orcid":true,"given":"Matthew H.","family":"Van Dam","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0980-1651","authenticated-orcid":true,"given":"Analyn Anzano","family":"Cabras","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"James B.","family":"Henderson","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrew J.","family":"Rominger","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4173-3756","authenticated-orcid":true,"given":"Cynthia","family":"P\u00e9rez Estrada","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1336-2505","authenticated-orcid":true,"given":"Arina D.","family":"Omer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9163-9544","authenticated-orcid":true,"given":"Olga","family":"Dudchenko","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Erez","family":"Lieberman Aiden","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7782-6041","authenticated-orcid":true,"given":"Athena W.","family":"Lam","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"340","published-online":{"date-parts":[[2021,8,30]]},"reference":[{"key":"pgen.1009745.ref001","volume-title":"Species inventory. 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In contrast to previous work exhibiting highly ordered single\u2010network diamond\u2010type photonic crystals, here, it is shown by combining optical microscopy and spectroscopy measurements with 3D focused ion beam (FIB) tomography that the blue scales of\n                    <jats:italic>P.\u00a0congestus mirabilis<\/jats:italic>\n                    differ from that of an ordered diamond structure. Through the use of FIB tomography on elytral scales filled with platinum (Pt) by electron beam\u2010assisted deposition, it is revealed that the red scales of this weevil possess a periodic diamond structure, while the network morphology of the blue scales exhibit diamond morphology only on the single scattering unit level with disorder on longer length scales. Full wave simulations performed on the reconstructed volumes indicate that this local order is sufficient to open a partial photonic bandgap even at low dielectric constant contrast between chitin and air in the absence of long\u2010range or translational order. 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               <jats:p>\n                  Patterns of genomic architecture across insects remain largely undocumented or decoupled from a broader phylogenetic context. For instance, it is unknown whether translocation rates differ between insect orders? We address broad scale patterns of genome architecture across Insecta by examining synteny in a phylogenetic framework from open source insect genomes. To accomplish this, we add a chromosome level genome to a crucial lineage, Coleoptera. Our assembly of the\n                  <jats:italic>Pachyrhynchus sulphureomaculatus<\/jats:italic>\n                  genome is the first chromosome scale genome for the hyperdiverse Phytophaga lineage and currently the largest insect genome assembled to this scale. The genome is significantly larger than those of other weevils, and this increase in size is caused by repetitive elements. Our results also indicate that, among beetles, there are instances of long-lasting (&gt;200 Ma) localization of genes to a particular chromosome with few translocation events. While some chromosomes have a paucity of translocations, intra-chromosomal synteny was almost absent, with gene order thoroughly shuffled along a chromosome. To place our findings in an evolutionary context, we compared syntenic patterns across Insecta. We find that synteny largely scales with clade age, with younger clades, such as Lepidoptera, having especially high synteny. 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(2016) Six new species of the genus <em>Pachyrhynchus <\/em>Germar, 1824 (Coleoptera: Curculionidae) from the Philippines. <em>Acta Biologica Universitatis Daugavpiliensis<\/em>, <em>Ilgas<\/em>, 16 (1), 77-89.<\/p><p class=\"HeadingRunIn\">Schoenherr, C.J. (1845) <em>Genera et species Curculionidum, cum synonymia hujus familiae. Species novae aut hactenus minus cognitae, descriptionibus a Dom. Leonardo Gyllenhal, C. H. Boheman, et entomologis aliis illustratae. Tomus octavus. Pars secunda. Supplementum continens<\/em>. Roret, Parisiis and Fleischer, Lipsiae, viii + 504 pp., 27 pls. [Synopsis geographica]<\/p><p class=\"HeadingRunIn\">Schultze, W. (1922) X. Beitrag zur Coleopteren Fauna der Philippinen. <em>Philippine Journal of Science<\/em>, <em>Manila<\/em>, 21 (6), 569-596, 4 pls.<\/p><p class=\"HeadingRunIn\">Schultze, W. (1923) A monograph of the pachyrrhynchid group of the Brachyderinae, Curculionidae: Part I. The genus <em>Pachyrrhynchus <\/em>Germar. <em>Philippine Journal of Science<\/em>, <em>Manila<\/em>, 23 (6), 609-673, 6 pls.<\/p><p class=\"HeadingRunIn\">Waterhouse, G.R. (1841) Untitled [Descriptions of the species of the curculionideous genus <em>Pachyrhynchus<\/em>, Sch., collected by H. Cuming, Esq., in the Philippine Islands.] <em>Journal of Proceedings of the Entomological Society of London<\/em>, March 1, 1841, 23-26. [1841-1846]<\/p><p class=\"HeadingRunIn\">Waterhouse, G.R. (1842) Untitled [Descriptions of the species of the curculionideous genus <em>Pachyrhynchus<\/em>, Sch., collected by H. Cuming, Esq., in the Philippine Islands.] <em>Annals and Magazine of Natural History<\/em>, <em>London<\/em>, Series 1, 8 (50), 217-220.<\/p><p class=\"HeadingRunIn\">Waterhouse, G.R. (1843) Descriptions of the species of the curculionideous genus <em>Pachyrhynchus<\/em>, Sch., collected by H. Cuming, Esq., in the Philippine Islands. <em>Transactions of the Royal Entomological Society of London<\/em>, 3 (4), 310-327. [1841\/1843]<\/p><p> <\/p>"}],"container-title":["Zootaxa"],"link":[{"URL":"https:\/\/www.mapress.com\/zt\/article\/download\/zootaxa.4585.1.13\/23372","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/www.mapress.com\/zt\/article\/download\/zootaxa.4585.1.13\/23372","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,5,1]],"date-time":"2023-05-01T00:01:52Z","timestamp":1682899312000},"score":19.449266,"resource":{"primary":{"URL":"https:\/\/www.mapress.com\/zt\/article\/view\/zootaxa.4585.1.13"}},"issued":{"date-parts":[[2019,4,11]]},"references-count":2,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2019,4,11]]}},"URL":"https:\/\/doi.org\/10.11646\/zootaxa.4585.1.13","ISSN":["1175-5334","1175-5326"],"issn-type":[{"value":"1175-5334","type":"electronic"},{"value":"1175-5326","type":"print"}],"published":{"date-parts":[[2019,4,11]]}},{"indexed":{"date-parts":[[2026,11,5]],"date-time":"2026-11-05T07:33:33Z","timestamp":1793864013862,"version":"4.6.1"},"reference-count":0,"publisher":"Philippine Coleopterological Network","issue":"1","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["JTC"],"published-print":{"date-parts":[[2022,7,28]]},"abstract":"<jats:p>A new species of easter egg weevil belonging to the Pachyrhynchus speciosus group from Misamis  Oriental, Mindanao Island, Philippines is described with brief notes on its ecology and behavior.<\/jats:p>","DOI":"10.53716\/jtc.3.1.11.2022","type":"journal-article","created":{"date-parts":[[2022,8,2]],"date-time":"2022-08-02T03:08:34Z","timestamp":1659409714000},"page":"88-97","source":"Crossref","is-referenced-by-count":2,"title":["Pachyrhynchus panumanon sp.nov., a new species of easter egg weevil  (Coleoptera, Curculionidae, Entiminae, Pachyrhynchini) from  Northern Mindanao, Philippines"],"prefix":"10.53716","volume":"3","author":[{"name":"Coleoptera Research Center, Institute of Biodiversity and Environment,  University of Mindanao, Davao City, Philippines","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Analyn","family":"Cabras","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Milton","family":"Medina","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"31683","published-online":{"date-parts":[[2022,7,30]]},"container-title":["Journal of Tropical Coleopterology"],"deposited":{"date-parts":[[2022,8,2]],"date-time":"2022-08-02T03:08:46Z","timestamp":1659409726000},"score":19.223566,"resource":{"primary":{"URL":"http:\/\/jtcoleop.com\/submission_articles\/Pachyrhynchus%20panumanon%20sp.nov.,%20a%20new%20species%20of%20easter%20egg%20weevil%20(Coleoptera,%20Curculionidae,%20Entiminae,%20Pachyrhynchini)%20from%20Northern%20Mindanao,%20Philippines.pdf"}},"issued":{"date-parts":[[2022,7,28]]},"references-count":0,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2022,7,30]]},"published-print":{"date-parts":[[2022,7,28]]}},"URL":"https:\/\/doi.org\/10.53716\/jtc.3.1.11.2022","ISSN":["2719-1486","2718-9740"],"issn-type":[{"value":"2719-1486","type":"print"},{"value":"2718-9740","type":"electronic"}],"published":{"date-parts":[[2022,7,28]]}},{"indexed":{"date-parts":[[2025,11,29]],"date-time":"2025-11-29T07:39:41Z","timestamp":1764401981682},"reference-count":0,"publisher":"Philippine Journal of Systematic Biology","issue":"1","content-domain":{"domain":[],"crossmark-restriction":false},"abstract":"<jats:p>A new Philippine weevil species of the genus Pachyrhynchus Germar, 1824 is described and illustrated from Mount Candalaga, Davao de Oro as P. cebrem sp. nov. 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