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Its fossil record includes Baltic, Burmese, Dominican, Mexican, and Sumatra ambers, as well as in fossil compressions. In this study, we described two more species of Trentepohlia from Miocene Mexican amber, including illustrations and an updated identification key for fossil Trentepohlia (Paramongoma). We also compare the new species with previously fossil species described in the genus, discussing their morphology, paleobiology, and systematics.<\/jats:p>","DOI":"10.11646\/palaeoentomology.8.2.9","type":"journal-article","created":{"date-parts":[[2025,4,28]],"date-time":"2025-04-28T23:50:45Z","timestamp":1745884245000},"page":"182-194","source":"Crossref","is-referenced-by-count":0,"title":["Two new species of Trentepohlia (Paramongona) (Diptera: Limoniinae) from Mexican amber (Miocene)"],"prefix":"10.11646","volume":"8","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-1220-1267","authenticated-orcid":false,"given":"DAUBIAN","family":"SANTOS","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6316-3064","authenticated-orcid":false,"given":"V\u00cdCTOR","family":"C\u00d3RDOVA-TABARES","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4782-2015","authenticated-orcid":false,"given":"LUCAS R. P.","family":"GOMES","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"4913","published-online":{"date-parts":[[2025,4,29]]},"container-title":["Palaeoentomology"],"link":[{"URL":"https:\/\/mapress.com\/pe\/article\/download\/palaeoentomology.8.2.9\/56168","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/mapress.com\/pe\/article\/download\/palaeoentomology.8.2.9\/56168","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,4,28]],"date-time":"2025-04-28T23:50:45Z","timestamp":1745884245000},"score":13.40065,"resource":{"primary":{"URL":"https:\/\/mapress.com\/pe\/article\/view\/palaeoentomology.8.2.9"}},"issued":{"date-parts":[[2025,4,29]]},"references-count":0,"journal-issue":{"issue":"2","published-online":{"date-parts":[[2025,4,29]]}},"URL":"https:\/\/doi.org\/10.11646\/palaeoentomology.8.2.9","ISSN":["2624-2834","2624-2826"],"issn-type":[{"value":"2624-2834","type":"electronic"},{"value":"2624-2826","type":"print"}],"published":{"date-parts":[[2025,4,29]]}},{"indexed":{"date-parts":[[2025,7,30]],"date-time":"2025-07-30T08:22:14Z","timestamp":1753863734421,"version":"3.41.2"},"reference-count":1,"publisher":"Wiley","issue":"38","license":[{"start":{"date-parts":[[2016,3,14]],"date-time":"2016-03-14T00:00:00Z","timestamp":1457913600000},"content-version":"vor","delay-in-days":15147,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Chemischer Informationsdienst"],"published-print":{"date-parts":[[1974,9,24]]},"DOI":"10.1002\/chin.197438394","type":"journal-article","created":{"date-parts":[[2016,3,19]],"date-time":"2016-03-19T17:49:40Z","timestamp":1458409780000},"source":"Crossref","is-referenced-by-count":0,"title":["ChemInform Abstract: ALGAL CAROTENOIDS PART 11, NEW CAROTENOID EPOXIDES FROM TRENTEPOHLIA IOLITHUS"],"prefix":"10.1002","volume":"5","author":[{"given":"GERD","family":"NYBRAATEN","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"SYNNOEVE","family":"LIAAEN\u2010JENSEN","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"311","published-online":{"date-parts":[[2016,3,14]]},"reference":[{"key":"e_1_2_1_1_2","doi-asserted-by":"publisher","DOI":"10.3891\/acta.chem.scand.28b-0483"}],"container-title":["Chemischer Informationsdienst"],"language":"en","link":[{"URL":"http:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1002%2Fchin.197438394","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1002%2Fchin.197438394","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1002\/chin.197438394","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,11,6]],"date-time":"2023-11-06T05:33:15Z","timestamp":1699248795000},"score":13.40065,"resource":{"primary":{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/chin.197438394"}},"issued":{"date-parts":[[1974,9,24]]},"references-count":1,"journal-issue":{"issue":"38","published-print":{"date-parts":[[1974,9,24]]}},"alternative-id":["10.1002\/chin.197438394"],"URL":"https:\/\/doi.org\/10.1002\/chin.197438394","archive":["Portico"],"ISSN":["0009-2975","2199-2924"],"issn-type":[{"type":"print","value":"0009-2975"},{"type":"electronic","value":"2199-2924"}],"published":{"date-parts":[[1974,9,24]]},"article-number":"chin.197438394"},{"indexed":{"date-parts":[[2026,10,31]],"date-time":"2026-10-31T10:34:05Z","timestamp":1793442845512,"version":"4.5.0"},"reference-count":37,"publisher":"Museum National d'Histoire Naturelle, Paris, France","issue":"29","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Zoosystema"],"published-print":{"date-parts":[[2020,11,24]]},"abstract":"<jats:p>We present the description of a new species of Limoniidae Rondani, 1856. Trentepohlia (Paramongoma) miocenica Mederos &amp; Wang n. sp. is described from resinites (little or poorly polymerized amber) of Yanigua Formation, in the Eastern District of Dominican Republic, well differentiated from the other species from the fossil record of Hispaniola to date, Trentepohlia (Paramongoma) agriPodenas &amp; Poinar, 1999. A key to the five fossil species of the subgenus ParamongomaBrunetti, 1911 described to date is also offered. Since the biology of the immature stages of Paramongoma are associated with aquatic microhabitats (such as phytotelmata and small mountain streams), the occurrence of such microhabitats can therefore be hypothesized in the area then occupied by the Hispaniolan paleo-island. The records of extant species of the subgenus Paramongoma from several islands of the Lesser and Greater Antilles, as well as presence of the suitable ecological conditions, offers the possibility of finding living species of TrentepohliaBigot, 1854 at Hispaniola, which is currently the only large island in the Caribbean without records of the genus.<\/jats:p>","DOI":"10.5252\/zoosystema2020v42a29","type":"journal-article","created":{"date-parts":[[2020,11,30]],"date-time":"2020-11-30T23:18:25Z","timestamp":1606778305000},"page":"583-592","source":"Crossref","is-referenced-by-count":1,"title":["A new fossil species of Trentepohlia (Diptera, Limoniidae) from the Dominican Miocene"],"prefix":"10.5252","volume":"42","author":[{"given":"Jorge","family":"Mederos","sequence":"first","affiliation":[{"name":"Museu de Ci\u00e8ncies Naturals de Barcelona, Passeig Picasso s\/n, 08003, Barcelona (SPAIN)"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yinan","family":"Wang","sequence":"additional","affiliation":[{"name":"Yinan, Box 2882, 1301 S Fern St, Arlington VA 22202 (USA)"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Susana","family":"Duque-Valero","sequence":"additional","affiliation":[{"name":"Museu de Ci\u00e8ncies Naturals de Barcelona, Passeig Picasso s\/n, 08003, Barcelona (SPAIN)"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marc","family":"Campeny","sequence":"additional","affiliation":[{"name":"Museu de Ci\u00e8ncies Naturals de Barcelona, Passeig Picasso s\/n, 08003, Barcelona (SPAIN)"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"3209","reference":[{"key":"1","unstructured":"C. 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Eight species of the genus <jats:italic>Trentepohlia<\/jats:italic> have been reported in Japan. We report another taxon, <jats:italic>Trentepohlia brevicellulis<\/jats:italic> (Cribb) S. Handa and H. Tsubota comb. et stat. nov., growing on bark in western Honshu, Japan. This alga was previously described as <jats:italic>Trentepohlia bosseae<\/jats:italic> var. <jats:italic>brevicellulis<\/jats:italic> Cribb. However, the relationship between the <jats:italic>bosseae<\/jats:italic> and <jats:italic>brevicellulis<\/jats:italic> varieties of <jats:italic>T. bosseae<\/jats:italic> could not be ascertained owing to the lack of genetic information for <jats:italic>brevicellulis<\/jats:italic>. Therefore, we aimed to examine the detailed morphological characteristics of <jats:italic>brevicellulis<\/jats:italic> in wild samples and cultured strains and to review the taxonomy, including systematic information obtained by genetic analysis. Its phylogenetic position was resolved based on 18S rDNA sequence data. It differs from <jats:italic>T. bosseae<\/jats:italic> and its variety <jats:italic>samoensis<\/jats:italic> in exhibiting a warty zoosporangium surface, an unthickened septum with no central pit field, and a non\u2010rusty\u2010brown cell wall. The four key characteristics of <jats:italic>T. brevicellulis<\/jats:italic> include a warty layer on the inner surface of the non\u2010bent side of the suffultory cell wall, an ostiole located near the base of the zoosporangium, curved tapering filaments with thickened cell walls, and globular vegetative spores in the basal portion of the filament. Transmission electron microscopy revealed a pit field wherein simple plasmodesmata were present in the septum. Phylogenetic analysis suggested that this alga and <jats:italic>T. bosseae<\/jats:italic> form distinct clades and that <jats:italic>T. brevicellulis<\/jats:italic> is separate from <jats:italic>T. bosseae<\/jats:italic>. Thus, our study helped redefine the accurate taxonomic position of the species under study as <jats:italic>Trentepohlia brevicellulis<\/jats:italic> (Cribb) S. Handa and H. Tsubota comb. et stat. nov., a clade distinct from <jats:italic>T. bosseae<\/jats:italic> and reported for the first time in Japan.<\/jats:p>","DOI":"10.1111\/pre.12537","type":"journal-article","created":{"date-parts":[[2023,11,30]],"date-time":"2023-11-30T07:31:55Z","timestamp":1701329515000},"page":"12-26","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":4,"title":["<i>Trentepohlia brevicellulis<\/i> comb. et stat. nov. 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Antioxidant activity was evaluated by five different methods: free radical scavenging, superoxide anion radical scavenging, reducing power, determination of total phenolic compounds and determination of total flavonoid content. As a result of the study methanol extract of Trentepohlia umbrina had moderate free radical scavenging activity with IC50 values 665.28 ?g\/ml. Moreover, the tested extract had effective reducing power and superoxide anion radical scavenging. Total content of phenol and flavonoid in extract were determined as pyrocatechol equivalent, and as rutin equivalent, respectively. The antimicrobial activity was estimated by determination of the minimal inhibitory concentration by the broth microdilution method against five species of bacteria and five species of fungi, including agents of human, animal and plant diseases, mycotoxin producers, and food spoilage agents. Generally, the tested extract had relatively strong antimicrobial activity against the tested microorganisms with minimum inhibitory concentration values ranging from 1.25 to 5 mg\/ml. The present study shows that tested methanol extract demonstrated relatively strong antioxidant and antimicrobial activities. It suggests that this microalga may be used as good sources of natural antioxidant and antimicrobial agents.<\/jats:p>","DOI":"10.15835\/nbha4027933","type":"journal-article","created":{"date-parts":[[2018,3,28]],"date-time":"2018-03-28T04:26:07Z","timestamp":1522211167000},"page":"86","source":"Crossref","is-referenced-by-count":17,"title":["Evaluation of In Vitro Antioxidant and Antimicrobial Activities of Green Microalgae Trentepohlia umbrina"],"prefix":"10.15835","volume":"40","author":[{"given":"Snezana","family":"SIMIC","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marijana","family":"KOSANIC","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Branislav","family":"RANKOVIC","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"6456","published-online":{"date-parts":[[2012,9,24]]},"container-title":["Notulae Botanicae Horti Agrobotanici Cluj-Napoca"],"link":[{"URL":"http:\/\/www.notulaebotanicae.ro\/index.php\/nbha\/article\/viewFile\/7933\/7029","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/www.notulaebotanicae.ro\/index.php\/nbha\/article\/viewFile\/7933\/7029","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2018,3,28]],"date-time":"2018-03-28T04:26:17Z","timestamp":1522211177000},"score":13.061068,"resource":{"primary":{"URL":"http:\/\/www.notulaebotanicae.ro\/index.php\/nbha\/article\/view\/7933"}},"issued":{"date-parts":[[2012,9,24]]},"references-count":0,"journal-issue":{"issue":"2","published-online":{"date-parts":[[2012,11,5]]}},"URL":"https:\/\/doi.org\/10.15835\/nbha4027933","ISSN":["1842-4309","0255-965X"],"issn-type":[{"value":"1842-4309","type":"electronic"},{"value":"0255-965X","type":"print"}],"published":{"date-parts":[[2012,9,24]]}},{"indexed":{"date-parts":[[2026,5,20]],"date-time":"2026-05-20T03:35:27Z","timestamp":1779248127425,"version":"3.51.4"},"reference-count":0,"publisher":"Egyptian Knowledge Bank","issue":"1","content-domain":{"domain":["egyjs.journals.ekb.eg"],"crossmark-restriction":false},"short-container-title":["Egyptian Journal of Phycology"],"published-print":{"date-parts":[[2024,12,1]]},"DOI":"10.21608\/egyjs.2024.295582.1029","type":"journal-article","created":{"date-parts":[[2024,7,23]],"date-time":"2024-07-23T08:28:13Z","timestamp":1721723293000},"page":"15-20","update-policy":"https:\/\/doi.org\/10.21608\/crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["BIOCHEMICAL PROFILING OF CHLOROPHYLLS, CAROTENOIDS, PROTEINS AND LIPIDS OF TRENTEPOHLIA AUREA (L) C. 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Mart, was made to clarify the phylogenetic position of the alga. Mitosis was closed and centric at late anphase with cytokinesis involving the production of cleavage membranes by dictyasames between the numerous, well\u2010separated daughter nuclei. Neither phycoplast nor phragmoplast microtubules were observed during cytokinesis. The lack of phycoplast microtubules and the presence of multilayered structures in flagellated cells suggest<\/jats:italic>Trentepohlia<jats:italic>is phylogenetically related to those green algae thought to have given rise to the land plants. 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Biodeterioration Bull."}],"container-title":["Journal of Phycology"],"language":"en","link":[{"URL":"https:\/\/api.wiley.com\/onlinelibrary\/tdm\/v1\/articles\/10.1111%2Fj.0022-3646.1992.00567.x","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/pdf\/10.1111\/j.0022-3646.1992.00567.x","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,10,23]],"date-time":"2023-10-23T08:58:09Z","timestamp":1698051489000},"score":12.958698,"resource":{"primary":{"URL":"https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/j.0022-3646.1992.00567.x"}},"issued":{"date-parts":[[1992,8]]},"references-count":11,"journal-issue":{"issue":"4","published-print":{"date-parts":[[1992,8]]}},"alternative-id":["10.1111\/j.0022-3646.1992.00567.x"],"URL":"https:\/\/doi.org\/10.1111\/j.0022-3646.1992.00567.x","archive":["Portico"],"ISSN":["0022-3646","1529-8817"],"issn-type":[{"value":"0022-3646","type":"print"},{"value":"1529-8817","type":"electronic"}],"published":{"date-parts":[[1992,8]]}},{"indexed":{"date-parts":[[2025,11,20]],"date-time":"2025-11-20T12:53:31Z","timestamp":1763643211934},"reference-count":0,"publisher":"ALOKI Ltd","issue":"3","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Appl. Ecol. Env. Res."],"DOI":"10.15666\/aeer\/1903_24432458","type":"journal-article","created":{"date-parts":[[2021,6,5]],"date-time":"2021-06-05T10:44:32Z","timestamp":1622889872000},"page":"2443-2458","source":"Crossref","is-referenced-by-count":1,"title":["FACTORS IN CULTURE MEDIA AFFECTING THE GROWTH, AND PIGMENT CONTENTS OF ALGA TRENTEPOHLIA MONILIA"],"prefix":"10.15666","volume":"19","author":[{"given":"S.","family":"SARAPHOL","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"S.","family":"VAJRODAYA","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"N.","family":"WONGKANTRAKORN","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"N.","family":"SANEVAS","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"6361","published-online":{"date-parts":[[2021]]},"container-title":["Applied Ecology and Environmental Research"],"link":[{"URL":"http:\/\/aloki.hu\/pdf\/1903_24432458.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,6,5]],"date-time":"2021-06-05T10:44:33Z","timestamp":1622889873000},"score":12.937595,"resource":{"primary":{"URL":"http:\/\/aloki.hu\/pdf\/1903_24432458.pdf"}},"issued":{"date-parts":[[2021]]},"references-count":0,"journal-issue":{"issue":"3","published-online":{"date-parts":[[2021]]}},"URL":"https:\/\/doi.org\/10.15666\/aeer\/1903_24432458","ISSN":["1589-1623","1785-0037"],"issn-type":[{"value":"1589-1623","type":"print"},{"value":"1785-0037","type":"electronic"}],"published":{"date-parts":[[2021]]}},{"indexed":{"date-parts":[[2026,8,5]],"date-time":"2026-08-05T03:18:07Z","timestamp":1785899887507,"version":"3.56.0"},"reference-count":43,"publisher":"MDPI AG","issue":"7","license":[{"start":{"date-parts":[[2019,4,10]],"date-time":"2019-04-10T00:00:00Z","timestamp":1554854400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["31600168"],"award-info":[{"award-number":["31600168"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IJMS"],"abstract":"<jats:p>Trentepohliales is an aerial order of Chlorophyta with approximately 80 species distributed mainly in tropical and subtropical regions. The taxonomy of this genus is quite difficult and presents a challenge for many phycologists. Although plentiful molecular data is available, most of the sequences are not identified at the species level. In the present study, we described a new specimen with detailed morphological data and identified it as Trentepohlia odorata. A phylogenetic analysis showed T. odorata as a novel lineage in Trentepohliales. T. odorata has the closest relationship with T. annulata, which is expected since sporangia of both species are without stalk cell and with dorsal pore. Species with such morphological characteristics may represent deep lineages in Trentepohliales. Although an increasing number of chloroplast genomes of Ulvophyceae have been reported in recent years, the whole plastome of Trentepohliales has not yet been reported. Thus, the chloroplast genome of Trentepohlia odorata was reported in the present study. The whole plastome was 399,372 bp in length, with 63 predicted protein-coding genes, 31 tRNAs, and 3 rRNAs. Additionally, we annotated 95 free-standing open reading frames, of which seven were annotated with plastid origins, 16 with eukaryotic genome origins, and 33 with bacterial genome origins. Four rpo genes (rpoA, rpoB, rpoC1, and rpoC2) were annotated within ORF clusters. These four genes were fragmented into several (partial) ORFs by in-frame stop codons. Additionally, we detected a frame shift mutation in the rpoB gene. The phylogenetic analysis supported that Trentepohliales clustered with Dasycladales and nested into the BDT clade (Bryopsidales, Dasycladales and Trentepohliales). Our results present the first whole chloroplast genome of a species of Trentepohliales and provided new data for understanding the evolution of the chloroplast genome in Ulvophyceae.<\/jats:p>","DOI":"10.3390\/ijms20071774","type":"journal-article","created":{"date-parts":[[2019,4,10]],"date-time":"2019-04-10T11:25:08Z","timestamp":1554895508000},"page":"1774","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":13,"title":["Characterization of the Chloroplast Genome of Trentepohlia odorata (Trentepohliales, Chlorophyta), and Discussion of its Taxonomy"],"prefix":"10.3390","volume":"20","author":[{"given":"Huan","family":"Zhu","sequence":"first","affiliation":[{"name":"Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yuxin","family":"Hu","sequence":"additional","affiliation":[{"name":"Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Feng","family":"Liu","sequence":"additional","affiliation":[{"name":"Key Laboratory of Marine Ecology and Environmental Sciences, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zhengyu","family":"Hu","sequence":"additional","affiliation":[{"name":"State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8565-2363","authenticated-orcid":false,"given":"Guoxiang","family":"Liu","sequence":"additional","affiliation":[{"name":"Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1968","published-online":{"date-parts":[[2019,4,10]]},"reference":[{"key":"ref_1","unstructured":"Guiry, M.D., and Guiry, G.M. 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This study emphasised the seasonal changes in carotenoid content amongst four different species of<jats:italic>Trentepohlia<\/jats:italic>, that is,<jats:italic>T. diffracta<\/jats:italic>,<jats:italic>T. arborum<\/jats:italic>,<jats:italic>T. umbrina<\/jats:italic>, and<jats:italic>T. abietina<\/jats:italic>, collected from four different substrata, that is, wall, rock, electric pole, and three types of tree bark (smooth, fissured, and rough). Quantitative estimation of different carotenoids, namely,<jats:italic>\u03b2<\/jats:italic>-cryptoxanthin, lutein, and<jats:italic>\u03b2<\/jats:italic>-carotene, from HPLC chromatogram peak showed a significant seasonal variation in all of the four species and<jats:italic>\u03b2<\/jats:italic>-carotene was threefold more in winter compared to summer. Amongst the selected species,<jats:italic>T. diffracta<\/jats:italic>collected from wall contained the highest amount of<jats:italic>\u03b2<\/jats:italic>-carotene both in summer and in winter, followed by<jats:italic>T. arborum<\/jats:italic>from rock and<jats:italic>T. abietina<\/jats:italic>from bark, and least amount was in<jats:italic>T. umbrina<\/jats:italic>collected from electric pole. Comparing the carotenoid content in<jats:italic>Trentepohlia abietina<\/jats:italic>growing in different types of barks, sample from smooth bark had the highest amount of carotenoids both in summer and in winter, followed by the sample from rough bark, and lowest amount was noted in fissured bark.<\/jats:p>","DOI":"10.1155\/2015\/201641","type":"journal-article","created":{"date-parts":[[2015,12,27]],"date-time":"2015-12-27T21:01:44Z","timestamp":1451250104000},"page":"1-8","source":"Crossref","is-referenced-by-count":10,"title":["Spatial and Temporal Variation of Carotenoids in Four Species of<i>Trentepohlia<\/i>(Trentepohliales, Chlorophyta)"],"prefix":"10.1155","volume":"2015","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6509-6371","authenticated-orcid":true,"given":"Diana","family":"Kharkongor","sequence":"first","affiliation":[{"name":"Algal Ecology Laboratory, Centre for Advanced Studies in Botany, Department of Botany, School of Life Sciences, North-Eastern Hill 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Krzeminski, 1993 .Fossil Tipulomorpha (Diptera, Nematocera) from Baltic amber (Upper Eocene). Revision of the genus Helius Lepeletier et Serville (Limoniidae)., Acta zoologica Cracoviensia, 35 :3, 597 \u2013601 ."}],"container-title":["Proceedings of the Academy of Natural Sciences of Philadelphia"],"language":"en","deposited":{"date-parts":[[2011,2,28]],"date-time":"2011-02-28T05:43:15Z","timestamp":1298871795000},"score":12.621986,"resource":{"primary":{"URL":"http:\/\/www.bioone.org\/doi\/abs\/10.1635\/0097-3157%282003%29153%5B0067%3AANSFTC%5D2.0.CO%3B2"}},"issued":{"date-parts":[[2003,12]]},"references-count":1,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2003,12]]}},"alternative-id":["10.1635\/0097-3157(2003)153[0067:ANSFTC]2.0.CO;2"],"URL":"https:\/\/doi.org\/10.1635\/0097-3157(2003)153[0067:ansftc]2.0.co;2","ISSN":["0097-3157","1938-5293"],"issn-type":[{"value":"0097-3157","type":"print"},{"value":"1938-5293","type":"electronic"}],"published":{"date-parts":[[2003,12]]}},{"indexed":{"date-parts":[[2026,10,13]],"date-time":"2026-10-13T16:33:00Z","timestamp":1791909180716,"version":"4.3.4"},"reference-count":71,"publisher":"MDPI AG","issue":"7","license":[{"start":{"date-parts":[[2024,6,26]],"date-time":"2024-06-26T00:00:00Z","timestamp":1719360000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"the Natural Science Research Start-up Foundation of Jianghan University","award":["08840001"],"award-info":[{"award-number":["08840001"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Genes"],"abstract":"<jats:p>Cephaleuros species are well-known as plant pathogens that cause red rust or algae spot diseases in many economically cultivated plants that grow in shady and humid environments. Despite their prevalence, the adaptive evolution of these pathogens remains poorly understood. We sequenced and characterized three Cephaleuros (Cephaleuros lagerheimii, Cephaleuros diffusus, and Cephaleuros virescens) chloroplast genomes, and compared them with seven previously reported chloroplast genomes. The chloroplast sequences of C. lagerheimii, C. diffusus, and C. virescens were 480,613 bp, 383,846 bp, and 472,444 bp in length, respectively. These chloroplast genomes encoded 94 genes, including 27 tRNA genes, 3 rRNA genes, and 64 protein-coding genes. Comparative analysis uncovered that the variation in genome size was principally due to the length of intergenic spacer sequences, followed by introns. Furthermore, several highly variable regions (trnY-GTA, trnL-TAG, petA, psbT, trnD-GTC, trnL-TAA, ccsA, petG, psaA, psaB, rps11, rps2, and rps14) were identified. Codon bias analysis revealed that the codon usage pattern of Cephaleuros is predominantly shaped by natural selection. Additionally, six chloroplast protein-coding genes (atpF, chlN, psaA, psaB, psbA, and rbcL) were determined to be under positive selection, suggesting they may play a vital roles in the adaptation of Cephaleuros to low-light intensity habitats.<\/jats:p>","DOI":"10.3390\/genes15070839","type":"journal-article","created":{"date-parts":[[2024,6,28]],"date-time":"2024-06-28T03:42:30Z","timestamp":1719546150000},"page":"839","update-policy":"https:\/\/doi.org\/10.3390\/mdpi_crossmark_policy","source":"Crossref","is-referenced-by-count":7,"title":["Comparative Analysis of Chloroplast Genomes in Cephaleuros and Its Related Genus (Trentepohlia): Insights into Adaptive Evolution"],"prefix":"10.3390","volume":"15","author":[{"given":"Jiao","family":"Fang","sequence":"first","affiliation":[{"name":"Wuhan Institute of Biomedical Sciences, School of Medicine, Jianghan University, Wuhan 430056, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lingling","family":"Zheng","sequence":"additional","affiliation":[{"name":"Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8565-2363","authenticated-orcid":false,"given":"Guoxiang","family":"Liu","sequence":"additional","affiliation":[{"name":"Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Huan","family":"Zhu","sequence":"additional","affiliation":[{"name":"Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"1968","published-online":{"date-parts":[[2024,6,26]]},"reference":[{"key":"ref_1","doi-asserted-by":"crossref","first-page":"740","DOI":"10.1094\/PDIS-01-15-0029-FE","article-title":"The Trentepohliales (Ulvophyceae, Chlorophyta): An Unusual Algal Order and its Novel Plant Pathogen, Cephaleuros","volume":"99","author":"Brooks","year":"2015","journal-title":"Plant Dis."},{"key":"ref_2","doi-asserted-by":"crossref","first-page":"189","DOI":"10.1080\/00318884.2021.1884799","article-title":"Molecular phylogeny and morphology of Cephaleuros (Trentepohliales, Chlorophyta) from southern China","volume":"60","author":"Fang","year":"2021","journal-title":"Phycologia"},{"key":"ref_3","doi-asserted-by":"crossref","first-page":"213","DOI":"10.2216\/07-31.1","article-title":"Morphology and taxonomy of five Cephaleuros species (Trentepohliaceae, Chlorophyta) from Japan, including three new species","volume":"48","author":"Suto","year":"2009","journal-title":"Phycologia"},{"key":"ref_4","first-page":"369","article-title":"Algal leaf spot of Lansium parasiticum caused by Cephaleuros sp in Thailand","volume":"98","author":"Sunpapao","year":"2016","journal-title":"J. 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Species were identified using characteristic morphological identification. The influence of environmental factors on the algae was analyzed using a statistical program, and seasonal changes in the quantity of photosynthetic pigments in the dominant species were evaluated. The average relative humidity was 69.34 \u00b1 12.90%, the average temperature was 26.23 \u00b1 3.79 \u00b0C, and the average light intensity was 139.78 \u00b1 42.21 \u00b5mol photon m&lt;sup data-id=\"superscript-1\"&gt;\u22122&lt;\/sup&gt; s&lt;sup data-id=\"superscript-2\"&gt;\u22121&lt;\/sup&gt;. Thirteen species were found: &lt;em&gt;Trentepohlia chapmanii&lt;\/em&gt;, &lt;em&gt;Trentepohlia&lt;\/em&gt; sp. 1, &lt;em&gt;Trentepohlia&lt;\/em&gt; sp. 2, &lt;em&gt;Trentepohlia sundarbanensis&lt;\/em&gt;, &lt;em&gt;Trentepohlia&lt;\/em&gt; sp. 3, &lt;em&gt;Trentepohlia rigidula&lt;\/em&gt;, &lt;em&gt;Trentepohlia&lt;\/em&gt; sp. 4, &lt;em&gt;Trentepohlia effusa&lt;\/em&gt;, &lt;em&gt;Trentepohlia monilia&lt;\/em&gt;, &lt;em&gt;Trentepohlia abietina&lt;\/em&gt;, &lt;em&gt;Trentepohlia&lt;\/em&gt; sp. 5, &lt;em&gt;Trentepohlia aurea&lt;\/em&gt;, and &lt;em&gt;Trentepohlia umbrina&lt;\/em&gt;. The largest number of species (seven to nine) were found at lower altitudes, from 473 to 517 m a.s.l. Species diversity was greatest in the winter season (13 species). Species found at low attitude were grouped together (Group 1) and had the greatest diversity, and the remaining species were divided into Groups 2, 3, and 4. Environmental factors had both positive and negative influences on the species, especially &lt;em&gt;T. chapmanii&lt;\/em&gt;, which was found below 1,003 m a.s.l., and &lt;em&gt;T. monilia&lt;\/em&gt;, which was found in areas with a high relative humidity of 74.50% to 83.93%. 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All rights are reserved, including those for text and data mining, AI training, and similar technologies.","name":"copyright","label":"Copyright"}],"article-number":"110421"},{"indexed":{"date-parts":[[2026,4,21]],"date-time":"2026-04-21T18:53:50Z","timestamp":1776797630096,"version":"3.51.2"},"reference-count":19,"publisher":"Wiley","issue":"6","license":[{"start":{"date-parts":[[2016,9,6]],"date-time":"2016-09-06T00:00:00Z","timestamp":1473120000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"funder":[{"DOI":"10.13039\/501100001809","name":"China National Nature Science Foundation","doi-asserted-by":"crossref","award":["31300330"],"award-info":[{"award-number":["31300330"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"crossref"}]},{"DOI":"10.13039\/501100001809","name":"China National Nature Science Foundation","doi-asserted-by":"crossref","award":["31572639"],"award-info":[{"award-number":["31572639"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Plant Biol J"],"published-print":{"date-parts":[[2016,11]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:sec><jats:label\/><jats:p>\n<jats:list list-type=\"bullet\">\n\n<jats:list-item><jats:p>Aerial microalgae are more exposed to harsh and rapidly changing environmental conditions, including desiccation and radiation. Under high light, aerial algae in the desiccated state would be highly subject to photodamage. Therefore, aerial algae need effective protective mechanisms to dissipate excess excitation energy.<\/jats:p><\/jats:list-item>\n\n<jats:list-item><jats:p>In this study, the changes in photosynthetic behaviors during desiccation and after rehydration in <jats:italic>Trentepohlia jolithus<\/jats:italic> were confirmed using chlorophyll <jats:italic>a<\/jats:italic> fluorescence (<jats:styled-content style=\"fixed-case\">OJIP<\/jats:styled-content>) transient, allowing determination of the photoprotection mechanisms of this aerial alga.<\/jats:p><\/jats:list-item>\n\n<jats:list-item><jats:p>The filaments of <jats:italic><jats:styled-content style=\"fixed-case\">T<\/jats:styled-content>.\u00a0jolithus<\/jats:italic> cells at 25% relative air humidity (RH) are significantly shrunken compared with those at 100% and 87% RH, decreasing the surface area for light absorption. At 25% RH, the shape and intensity of the <jats:styled-content style=\"fixed-case\">OJIP<\/jats:styled-content> transient disappeared, but recovered rapidly to the level at 100% RH after 5\u00a0s of rehydration. Compared with 100% <jats:styled-content style=\"fixed-case\">RH<\/jats:styled-content>, the maximum quantum yield of <jats:styled-content style=\"fixed-case\">PS<\/jats:styled-content>II (\u03c6<jats:sub>Po<\/jats:sub>), phenomenological energy fluxes for absorption (<jats:styled-content style=\"fixed-case\">ABS<\/jats:styled-content>\/<jats:styled-content style=\"fixed-case\">CS<\/jats:styled-content>m) and active <jats:styled-content style=\"fixed-case\">PS<\/jats:styled-content>II reaction centers (<jats:styled-content style=\"fixed-case\">RC<\/jats:styled-content>s) at 25% <jats:styled-content style=\"fixed-case\">RH<\/jats:styled-content> decreased significantly, the specific energy fluxes for absorption (<jats:styled-content style=\"fixed-case\">ABS<\/jats:styled-content>\/<jats:styled-content style=\"fixed-case\">RC<\/jats:styled-content>) increased significantly, but the specific energy fluxes for trapping (<jats:styled-content style=\"fixed-case\">TR<\/jats:styled-content>o\/<jats:styled-content style=\"fixed-case\">RC<\/jats:styled-content>) at 25% RH did not change. These parameters at 25% RH recovered rapidly to the level at 100% RH after 5\u00a0s of rehydration.<\/jats:p><\/jats:list-item>\n\n<jats:list-item><jats:p>These results suggest that the efficiency of <jats:styled-content style=\"fixed-case\">PS<\/jats:styled-content>II light absorption and activities of <jats:styled-content style=\"fixed-case\">PS<\/jats:styled-content>II <jats:styled-content style=\"fixed-case\">RC<\/jats:styled-content>s were reversibly down\u2010regulated in desiccated <jats:italic>T.\u00a0jolithus<\/jats:italic>, which may be a special adaptive mechanism for the survivability of aerial microalgae in habitats with rapidly changing water availability.<\/jats:p><\/jats:list-item>\n<\/jats:list>\n<\/jats:p><\/jats:sec>","DOI":"10.1111\/plb.12494","type":"journal-article","created":{"date-parts":[[2016,8,16]],"date-time":"2016-08-16T15:06:39Z","timestamp":1471359999000},"page":"1058-1061","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":15,"title":["Complete inactivation of photosynthetic activity during desiccation and rapid recovery by rehydration in the aerial microalga <i>Trentepohlia jolithus<\/i>"],"prefix":"10.1111","volume":"18","author":[{"given":"L.","family":"Zhang","sequence":"first","affiliation":[{"name":"Key Laboratory of Experimental Marine Biology Institute of Oceanology Chinese Academy of Sciences Qingdao China"},{"name":"National\u2010Local Joint Engineering Research Center for Haematococcus pluvialis and Astaxanthin Products Yunnan Alphy Biotech Co., Ltd. Chuxiong China"},{"name":"Laboratory for Marine Biology and Biotechnology Qingdao National Laboratory for Marine Science and Technology Qingdao China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Y.","family":"Li","sequence":"additional","affiliation":[{"name":"Key Laboratory of Experimental Marine Biology Institute of Oceanology Chinese Academy of Sciences Qingdao China"},{"name":"Laboratory for Marine Biology and Biotechnology Qingdao National Laboratory for Marine Science and Technology Qingdao China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"J.","family":"Liu","sequence":"additional","affiliation":[{"name":"Key Laboratory of Experimental Marine Biology Institute of Oceanology Chinese Academy of Sciences Qingdao China"},{"name":"National\u2010Local Joint Engineering Research Center for Haematococcus pluvialis and Astaxanthin Products Yunnan Alphy Biotech Co., Ltd. Chuxiong China"},{"name":"Laboratory for Marine Biology and Biotechnology Qingdao National Laboratory for Marine Science and Technology Qingdao China"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"311","published-online":{"date-parts":[[2016,9,6]]},"reference":[{"key":"e_1_2_6_2_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0269-7491(01)00091-4"},{"key":"e_1_2_6_3_1","first-page":"231","article-title":"Desiccation survival times in different desiccation\u2010tolerant plants","volume":"46","author":"Benk\u00f6 Z.","year":"2002","journal-title":"Acta Biologica 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Freshly sampled material stained with Auramine O, DIOC<jats:sub>6<\/jats:sub>, and FM 1\u201343 showed an intact physiological status. Cell walls were depicted with calcofluor white and Carbotrace. When subjected to three repeated and controlled cycles of desiccation over silica gel (~\u200910% relative humidity) followed by rehydration, <jats:italic>T. aurea<\/jats:italic> recovered about 50% of the initial photosynthetic yield of photosystem II (YII). In contrast, <jats:italic>T. umbrina<\/jats:italic> and <jats:italic>T. jolithus<\/jats:italic> recovered to 100% of the initial YII. HPLC and GC analysis of compatible solutes found highest proportions of erythritol in <jats:italic>T. umbrina<\/jats:italic> and mannitol\/arabitol in <jats:italic>T. jolithus<\/jats:italic>. The lowest total compatible solute concentrations were detected in <jats:italic>T. aurea<\/jats:italic>, while the C\/N ratio was highest in this species, indicative of nitrogen limitation. The prominent orange to red coloration of all <jats:italic>Trentepohlia<\/jats:italic> was due to extremely high carotenoid to Chl <jats:italic>a<\/jats:italic> ratio (15.9 in <jats:italic>T. jolithus<\/jats:italic>, 7.8 in <jats:italic>T. aurea<\/jats:italic>, and 6.6. in <jats:italic>T. umbrina<\/jats:italic>). Photosynthetic oxygen production was positive up to\u2009~\u20091500\u00a0\u00b5mol photons m<jats:sup>\u22122<\/jats:sup>\u00a0s<jats:sup>\u22121<\/jats:sup> with the highest P<jats:sub>max<\/jats:sub> and alpha values in <jats:italic>T. aurea<\/jats:italic>. All strains showed a broad temperature tolerance with optima for gross photosynthesis between 20 and 35\u00a0\u00b0C. The presented data suggest that all investigated <jats:italic>Trentepohlia<\/jats:italic> species are well adapted to their terrestrial lifestyle on exposed to sunlight on a vertical substrate with little water holding capacity. Nevertheless, the three <jats:italic>Trentepohlia<\/jats:italic> species differed concerning their desiccation tolerance and compatible solute concentrations. The lower compatible solute contents in <jats:italic>T. aurea<\/jats:italic> explain the incomplete recovery of YII after rehydration.<\/jats:p>","DOI":"10.1007\/s00709-023-01866-2","type":"journal-article","created":{"date-parts":[[2023,6,8]],"date-time":"2023-06-08T18:01:57Z","timestamp":1686247317000},"page":"1539-1553","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":5,"title":["Terrestrial Trentepohlia sp. 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Stress imposition for a period of 7 d until the relative water content (RWC) of the algal thalli reached\u2009&lt;\u200915%, resulted in a substantial change in morphological attributes, stress markers such as reactive oxygen species (ROS), oxidative stress markers, antioxidant metabolism, and metabolic responsesThe desiccation stress caused extensive changes in algal thalli, which were reflected in terms of loss of color and appearance of white patches as compared to the control. Microscopic studies revealed a considerable impact of desiccation stress on the algal filaments, which were manifested by bending and an increase in translucency due to the loss of cytoplasmic contents. Though desiccation stress could not impose any statistically significant impact on photosynthetic pigment levels, it caused a significant rise in ROS production and elevated the level of oxidative stress markers. With high ROS content and substantially high oxidative stress, the antioxidant metabolism was strongly affected in the alga during desiccation stress compared to the control. The metabolomic analysis revealed that desiccation causes a major metabolic shift in the alga, which could be attributed to the strategy for adaptation to desiccation through metabolic reprogramming. The results suggested that\n                  <italic>Trentepohlia<\/italic>\n                  is mostly susceptible to desiccation, but still manages to survive by sustaining a pool of some vital (signature) metabolites.\n                <\/p>","DOI":"10.21203\/rs.3.rs-8012098\/v1","type":"posted-content","created":{"date-parts":[[2025,11,21]],"date-time":"2025-11-21T13:22:13Z","timestamp":1763731333000},"source":"Crossref","is-referenced-by-count":0,"title":["Desiccation-induced oxidative stress causes metabolic flux in the terrestrial green alga Trentepohlia sp., suggesting extensive metabolic reprogramming for stress adaptation"],"prefix":"10.21203","author":[{"given":"Parul","family":"Sharma","sequence":"first","affiliation":[{"name":"Assam University - Dargakona Campus: Assam University"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shuvasish","family":"Choudhury","sequence":"additional","affiliation":[{"name":"Assam University - Dargakona Campus: Assam University"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jayashree","family":"Rout","sequence":"additional","affiliation":[{"name":"Assam University - Dargakona Campus: Assam University"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"ref1","first-page":"121","article-title":"Oxygen radicals in biological systems: Catalase in vitro","volume":"105","author":"Aebi H","year":"1984","unstructured":"Aebi, H. 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E. : Stable isotope dilution assay (SIDA) and HS-SPME-GCMS quantification of key aroma volatiles for fruit and sap of Australian mango cultivars, <i>Food Chem<\/i>., <b>221<\/b>, 613-619, (2017).","DOI":"10.1016\/j.foodchem.2016.11.130"},{"key":"24","doi-asserted-by":"crossref","unstructured":"24) Berneira, L. M., da Silva, C. C., Passos, L. F., Mansilla, A., dos Santos, M. A. Z., de Pereira, C. M. P. : Evaluation of volatile organic compounds in brown and red sub-Antarctic macroalgae, <i>Braz J. Bot<\/i>., <b>44<\/b>, 79-84, (2021).","DOI":"10.1007\/s40415-020-00684-7"},{"key":"25","doi-asserted-by":"crossref","unstructured":"25) Cozzolino, R., De Giulio, B., Petriccione, M., Martignetti, A., Malorni, L., Zampella, L., Laurino, C., Pellicano, M. P. : Comparative analysis of volatile metabolites, quality and sensory attributes of <i>Actinidia chinensis<\/i> fruit, <i>Food Chem<\/i>., <b>316<\/b>, (2020).","DOI":"10.1016\/j.foodchem.2020.126340"},{"key":"26","doi-asserted-by":"crossref","unstructured":"26) Drenjan\u010devi\u0107, M., Rastija, V., Juki\u0107, V., Zmai\u0107, K., Kujund\u017ei\u0107, T., Rebeki\u0107, A., Schwander, F. : Effects of early leaf removal on volatile compounds concentrations in cabernet sauvignon wines from the ilok vineyards, <i>Poljoprivreda<\/i>, <b>24<\/b>, 10-17, (2018).","DOI":"10.18047\/poljo.24.1.2"},{"key":"27","unstructured":"27) \u7530\u6751\u5553\u654f\uff0c\u4e2d\u672c\u82f1\u559c\uff0c\u6749\u6ca2\u3000\u535a\uff0c\u7e6a\u5185\u5229\u5553\uff1a\u7dd1\u85fb\u30a2\u30ca\u30a2\u30aa\u30b5\uff08<i>Ulva pertusa<\/i>\uff09\u63ee\u767a\u6027\u6210\u5206\u306e\u8133\u6ce2\u306b\u53ca\u307c\u3059\u5f71\u97ff\uff0c\u65e5\u672c\u5473\u3068\u5302\u5b66\u4f1a\u8a8c\uff0c<b>2<\/b>\uff0c19-23\uff0c\uff081995\uff09\uff0e"},{"key":"28","unstructured":"28) NCBI : PubChem in National Center for Biotechnology Information, <i>Food additives and ingredients<\/i>, https:\/\/pubchem.ncbi.nlm.nih.gov\/, (viewed in April 2021), (2021)."}],"container-title":["Journal of Japan Association on Odor Environment"],"language":"en","link":[{"URL":"https:\/\/www.jstage.jst.go.jp\/article\/jao\/52\/4\/52_226\/_pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,5,8]],"date-time":"2024-05-08T05:11:17Z","timestamp":1715145077000},"score":10.901831,"resource":{"primary":{"URL":"https:\/\/www.jstage.jst.go.jp\/article\/jao\/52\/4\/52_226\/_article\/-char\/ja\/"}},"issued":{"date-parts":[[2021,7,25]]},"references-count":28,"journal-issue":{"issue":"4","published-print":{"date-parts":[[2021]]}},"URL":"https:\/\/doi.org\/10.2171\/jao.52.226","ISSN":["1348-2904","1349-7847"],"issn-type":[{"value":"1348-2904","type":"print"},{"value":"1349-7847","type":"electronic"}],"published":{"date-parts":[[2021,7,25]]}},{"indexed":{"date-parts":[[2026,8,4]],"date-time":"2026-08-04T00:03:33Z","timestamp":1785801813087,"version":"3.56.0"},"reference-count":0,"publisher":"Magnolia Press","issue":"1","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Phytotaxa"],"abstract":"<jats:p>The current study describes a new species, Allographa effusosoredica, from the Western Ghats, India, along with its Trentepohlia photobiont. This study is based on morphological, chemical and molecular analyses using mtSSU, LSU and RPB2 sequence data for Allographa effusosoredica mycobiont and ITS sequence data for Trentepohlia photobiont. Allographa effusosoredica is characterized by a thin effuse thallus with diffuse soredia, 8-spored asci, transversely 7\u201311 septate ascospores, and norstictic acid chemistry. It is surprisingly similar to the widespread Graphis glaucescens, which differs in the absence of soredia and norstictic acid, but clusters phylogenetically within Allographa, allied to Allographa xanthospora, making the limits between Allographa and the distantly related genus Graphis more diffuse and raising doubts about the correct placement of G. glaucescens. The photobiont of the novel species is allied to\u00a0Trentepohlia\u00a0cf.\u00a0arborum\u00a0HZ-2017 isolate YN1047. This is the first species of\u00a0Allographa\u00a0sequenced from India.<\/jats:p>","DOI":"10.11646\/phytotaxa.664.1.3","type":"journal-article","created":{"date-parts":[[2024,9,2]],"date-time":"2024-09-02T22:42:18Z","timestamp":1725316938000},"page":"31-45","source":"Crossref","is-referenced-by-count":3,"title":["Molecular studies of Allographa effusosoredica sp. nov. (Graphidaceae) along with its Trentepohlia photobiont and a comprehensive checklist for Indian Allographa"],"prefix":"10.11646","volume":"664","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-6772-7736","authenticated-orcid":false,"given":"PARAYELIL A.","family":"ANSIL","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0401-8294","authenticated-orcid":false,"given":"KUNHIRAMAN C.","family":"RAJESHKUMAR","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3431-4636","authenticated-orcid":false,"given":"ROBERT","family":"L\u00dcCKING","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0001-6984-5947","authenticated-orcid":false,"given":"SRUTHI","family":"O. PARAPARATH","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6511-5421","authenticated-orcid":false,"given":"BHARATI","family":"SHARMA","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"4913","published-online":{"date-parts":[[2024,9,3]]},"container-title":["Phytotaxa"],"link":[{"URL":"https:\/\/phytotaxa.mapress.com\/pt\/article\/download\/phytotaxa.664.1.3\/52109","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/phytotaxa.mapress.com\/pt\/article\/download\/phytotaxa.664.1.3\/52109","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,9,2]],"date-time":"2024-09-02T22:42:18Z","timestamp":1725316938000},"score":10.79912,"resource":{"primary":{"URL":"https:\/\/phytotaxa.mapress.com\/pt\/article\/view\/phytotaxa.664.1.3"}},"issued":{"date-parts":[[2024,9,3]]},"references-count":0,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2024,9,3]]}},"URL":"https:\/\/doi.org\/10.11646\/phytotaxa.664.1.3","ISSN":["1179-3163","1179-3155"],"issn-type":[{"value":"1179-3163","type":"electronic"},{"value":"1179-3155","type":"print"}],"published":{"date-parts":[[2024,9,3]]}},{"indexed":{"date-parts":[[2025,12,20]],"date-time":"2025-12-20T06:25:42Z","timestamp":1766211942296,"version":"3.48.0"},"reference-count":0,"publisher":"College of Graduate Studies, Walailak University","issue":"1","license":[{"start":{"date-parts":[[2025,10,30]],"date-time":"2025-10-30T00:00:00Z","timestamp":1761782400000},"content-version":"unspecified","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Trends Sci"],"abstract":"<jats:p>The global rise of antibiotic resistance underscores the urgent need for novel antibacterial agents with new mechanisms of action. Trentepohlia aurea, a carotenoid- and phenolic-rich subaerial green alga, remains largely unexplored for its therapeutic potential. This study evaluated the antibacterial activity of its methanol extract via\u00a0in vitro\u00a0disc diffusion assays and investigated the interaction of its bioactive constituents with bacterial DNA gyrase subunit B (PDB ID: 6KZZ) through\u00a0in silico\u00a0molecular docking. The extract produced inhibition zones of 11.3 \u00b1 0.55 mm against\u00a0Staphylococcus aureus, 10.9 \u00b1 0.21 mm against\u00a0Salmonella Typhii, and 10.8 \u00b1 0.61 mm against\u00a0Streptococcus mutans, indicating moderate antibacterial activity. GC-MS profiling identified 26 compounds, with Aphthosin exhibiting the strongest predicted gyrase-binding affinity (\u20137.4 kcal\/mol), surpassing a native ligand. ADME-toxicity predictions suggested generally favorable pharmacokinetics with low toxicity, though some compounds displayed organ-specific risks. While MIC\/MBC determinations and direct\u00a0in vitro\u00a0testing of individual compounds were not performed, this first report on\u00a0T. aurea\u00a0as a potential DNA gyrase inhibitor highlights its promise as a source of structurally diverse natural products for antibacterial drug discovery and warrants further mechanistic validation and potency optimization.\nHIGHLIGHTS\nThis study demonstrates the antibacterial potential of Trentepohlia aurea, with its methanol extract showing notable inhibition against\u00a0S. aureus\u00a0and\u00a0S. typhii. GC-MS analysis identified 26 bioactive compounds, with in silico docking highlighting Aphthosin as the top candidate (\u20137.4 kcal\/mol) for binding to bacterial DNA gyrase (6KZZ). ADME and toxicity predictions indicated favourable pharmacokinetic profiles and generally low toxicity. 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All rights reserved.","name":"copyright","label":"Copyright"}],"article-number":"101803"},{"indexed":{"date-parts":[[2026,11,6]],"date-time":"2026-11-06T01:32:14Z","timestamp":1793928734228,"version":"4.8.0"},"reference-count":68,"publisher":"Wiley","issue":"1","license":[{"start":{"date-parts":[[2018,12,18]],"date-time":"2018-12-18T00:00:00Z","timestamp":1545091200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/onlinelibrary.wiley.com\/termsAndConditions#vor"}],"funder":[{"DOI":"10.13039\/100007543","name":"Grantov\u00e1 Agentura, Univerzita Karlova","doi-asserted-by":"publisher","award":["574216"],"award-info":[{"award-number":["574216"]}],"id":[{"id":"10.13039\/100007543","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["Journal of Phycology"],"published-print":{"date-parts":[[2019,2]]},"abstract":"<jats:p>Mats of the green alga <jats:italic>Trentepohlia<\/jats:italic>, a genus widely distributed in the tropics as well as temperate regions, have always been perceived as homogeneous (i.e., formed by only one species). As such, their general nature and specific feature play a supportive role in the species delimitation. However, the presence of morphologically dissimilar thalli was observed under the light microscope and when cultivating a piece of a single mat. To address this, we performed <jats:styled-content style=\"fixed-case\">DNA<\/jats:styled-content> cloning of the <jats:italic>rbc<\/jats:italic>L gene on mat fragments of <jats:italic>T.\u00a0abietina<\/jats:italic>,<jats:italic> T.\u00a0annulata<\/jats:italic>,<jats:italic> T.\u00a0jolithus<\/jats:italic> and <jats:italic>T.\u00a0umbrina<\/jats:italic> sampled in Europe to reveal if they are composed of one or more species. We revealed that more <jats:italic>Trentepohlia<\/jats:italic> haplotypes may coexist in a single mat. In consideration of this, we conclude that the use of material isolated in unialgal culture will be almost mandatory for a taxonomic reassessment of this complicated genus. Another direct implication of this problem is that herbarium specimens consisting of field\u2010collected material should not be used for direct sequencing. We further hypothesize the reasons why multiple haplotypes of <jats:italic>Trentepohlia<\/jats:italic> occur more frequently in the tuft\u2010like mats. Possibly, fragments and\/or cells of other microalgae, including other species of <jats:italic>Trentepohlia<\/jats:italic>, might be retained in such mats more easily than in the crustose trentepohlialean mats.<\/jats:p>","DOI":"10.1111\/jpy.12817","type":"journal-article","created":{"date-parts":[[2018,11,27]],"date-time":"2018-11-27T18:57:37Z","timestamp":1543345057000},"page":"224-235","update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":5,"title":["<scp>DNA<\/scp> cloning demonstrates high genetic heterogeneity in populations of the subaerial green alga <i>Trentepohlia<\/i> (Trentepohliales, Chlorophyta)"],"prefix":"10.1111","volume":"55","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-9936-993X","authenticated-orcid":false,"given":"Michala","family":"Klime\u0161ov\u00e1","sequence":"first","affiliation":[{"name":"Faculty of Science Charles University Ben\u00e1tsk\u00e1 2 128 00 Prague Czech Republic"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7392-3653","authenticated-orcid":false,"given":"Fabio","family":"Rindi","sequence":"additional","affiliation":[{"name":"Dipartimento di Scienze della Vita e dell'Ambiente Universit\u00e0 Politecnica delle Marche Via Brecce Bianche 60131 Ancona Italy"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1201-3290","authenticated-orcid":false,"given":"Pavel","family":"\u0160kaloud","sequence":"additional","affiliation":[{"name":"Faculty of Science Charles University Ben\u00e1tsk\u00e1 2 128 00 Prague Czech Republic"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2018,12,18]]},"reference":[{"key":"e_1_2_8_1_1","doi-asserted-by":"publisher","DOI":"10.1023\/A:1008195710981"},{"key":"e_1_2_8_2_1","doi-asserted-by":"publisher","DOI":"10.1007\/s10811-007-9245-9"},{"key":"e_1_2_8_3_1","doi-asserted-by":"crossref","first-page":"312","DOI":"10.5962\/bhl.title.1829","volume-title":"Systema Algarum","author":"Agardh C. 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These species formed perennial populations on a variety of substrata.<jats:italic>T. abietina<\/jats:italic>occurred on bark of trees;<jats:italic>T.<\/jats:italic>cf.<jats:italic>umbrina<\/jats:italic>occurred on stone walls; and<jats:italic>P. lagenifera<\/jats:italic>grew on several substrata, mainly cement and asbestos sheeting.<jats:italic>T. aurea<\/jats:italic>and<jats:italic>T. iolithus<\/jats:italic>were found on old concrete and cement walls; in particular, the latter species formed characteristic, extensive, deep\u2010red patches on many buildings. In culture, best growth and reproduction of these species were observed at 10 and 15\u00b0 C, 16:8 h light:dark. Both in culture and in the field, reproduction took place by release of biflagellate swarmers behaving as asexual spores, germinating to produce new plants without any evidence of sexual fusion; release of biflagellate swarmers in the field was generally observed in all seasons throughout a whole annual cycle. Confirmation of the occurrence of sexual reproduction in<jats:italic>Trentepohlia<\/jats:italic>was not obtained.<\/jats:p>","DOI":"10.1046\/j.1529-8817.2002.01193.x","type":"journal-article","created":{"date-parts":[[2003,3,12]],"date-time":"2003-03-12T08:49:06Z","timestamp":1047458946000},"page":"39-54","source":"Crossref","is-referenced-by-count":65,"title":["DIVERSITY, LIFE HISTORY, AND ECOLOGY OF<i>TRENTEPOHLIA<\/i>AND<i>PRINTZINA<\/i>(TRENTEPOHLIALES, CHLOROPHYTA) IN URBAN HABITATS IN WESTERN IRELAND<sup>1<\/sup>"],"prefix":"10.1111","volume":"38","author":[{"given":"Fabio","family":"Rindi","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Michael D.","family":"Guiry","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"311","published-online":{"date-parts":[[2002,2,19]]},"reference":[{"key":"e_1_2_6_2_1","doi-asserted-by":"publisher","DOI":"10.1023\/A:1008195710981"},{"key":"e_1_2_6_3_1","first-page":"81","article-title":"On some Brazilian species of Trentepohliaceae.","volume":"5","author":"Akiyama M.","year":"1971","journal-title":"Mem. 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